EWM24598.1, cds6087 (CDS) Nannochloropsis gaditana

Overview
NameEWM24598.1
Unique Namecds6087
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:577493..578581 +
Alignment locationCM002467.1:578723..578839 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24598.1
Productdna repair endonuclease xpf
Orig transcript idgnl|cribi|Naga_100062g19.921.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:577493..578581 +
CM002467.1supercontigCM002467.1:578723..578839 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR011335Restrct_endonuc-II-like
IPR020819DNA_repair_nuc_XPF/helicase
IPR006166ERCC4_domain
Homology
BLAST of EWM24598.1 vs. NCBI_GenBank
Match: gi|585106114|gb|EWM24598.1| (dna repair endonuclease xpf [Nannochloropsis gaditana])

HSP 1 Score: 818.15 bits (2112), Expect = 0.000e+0
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 0
Query:    1 MKASGTGGGAEGSARATRAKGGGDGGRGEGGSTAVAMRLEEHTRTERPLPAGTGRGRRRSRPWGGKGERSKYERARELFDRMGGGGSGMATAGEGAFEEGDRWQHVIMITYSQAYTNMKLIEEVYPDAIILYDPDAQFVREVEVHQARRPPTETLRVYFMVYEESVEEQRYLSALTREKESFERLLVEKKHMVMPASLYAESLPNPGSYIDKLVADTRALTRGQPVRPACARVVVDVREFRSSLPNLLHAGGLDVVPLTLAVGDFVLTPEVVIERKSVADLFGSFGSGRLYTQVESMLRFYKAATLLIEFQDDKAFSLQAPGDITDDIQVTNIVSKLVLLTLHFPALRILWSRNSHQTVLLFKALKAGNAPVDVQKALVSKQPAVPPLRKHFNVEGFLWSR 401
            MKASGTGGGAEGSARATRAKGGGDGGRGEGGSTAVAMRLEEHTRTERPLPAGTGRGRRRSRPWGGKGERSKYERARELFDRMGGGGSGMATAGEGAFEEGDRWQHVIMITYSQAYTNMKLIEEVYPDAIILYDPDAQFVREVEVHQARRPPTETLRVYFMVYEESVEEQRYLSALTREKESFERLLVEKKHMVMPASLYAESLPNPGSYIDKLVADTRALTRGQPVRPACARVVVDVREFRSSLPNLLHAGGLDVVPLTLAVGDFVLTPEVVIERKSVADLFGSFGSGRLYTQVESMLRFYKAATLLIEFQDDKAFSLQAPGDITDDIQVTNIVSKLVLLTLHFPALRILWSRNSHQTVLLFKALKAGNAPVDVQKALVSKQPAVPPLRKHFNVEGFLWSR
Sbjct:    1 MKASGTGGGAEGSARATRAKGGGDGGRGEGGSTAVAMRLEEHTRTERPLPAGTGRGRRRSRPWGGKGERSKYERARELFDRMGGGGSGMATAGEGAFEEGDRWQHVIMITYSQAYTNMKLIEEVYPDAIILYDPDAQFVREVEVHQARRPPTETLRVYFMVYEESVEEQRYLSALTREKESFERLLVEKKHMVMPASLYAESLPNPGSYIDKLVADTRALTRGQPVRPACARVVVDVREFRSSLPNLLHAGGLDVVPLTLAVGDFVLTPEVVIERKSVADLFGSFGSGRLYTQVESMLRFYKAATLLIEFQDDKAFSLQAPGDITDDIQVTNIVSKLVLLTLHFPALRILWSRNSHQTVLLFKALKAGNAPVDVQKALVSKQPAVPPLRKHFNVEGFLWSR 401          
BLAST of EWM24598.1 vs. NCBI_GenBank
Match: gi|566013372|gb|ETI36283.1| (hypothetical protein F443_17559 [Phytophthora parasitica P1569])

HSP 1 Score: 270.011 bits (689), Expect = 2.064e-78
Identity = 145/290 (50.00%), Postives = 190/290 (65.52%), Query Frame = 0
Query:   96 AFEEGDRWQHVIMITYSQA----YTNMKLIEEVYPDAIILYDPDAQFVREVEV-HQARRPPTETLRVYFMVYEESVEEQRYLSALTREKESFERLLVEKKHMVMPASLYAESLPNPGSYIDKLV---ADTRALTRGQPVRPACARVVVDVREFRSSLPNLLHAGGLDVVPLTLAVGDFVLTPEVVIERKSVADLFGSFGSGRLYTQVESMLRFYKAATLLIEFQDDKAFSLQAPGDITDDIQVTNIVSKLVLLTLHFPALRILWSRNSHQTVLLFKALKAGNAPVDVQKA 377
            + E  D    V++ TY QA    Y     +E++ P  IILYDPD  F+REVEV H +   P E   +YF++Y+ES E+Q YLS + REK SF++L+ +K H++MPA++Y   LP       + V    DTR   R +  R    +VVVDVREFRS+LP++LH  GL V+P+TL +GD+VL+PE+ +ERKS++DLFGS  SGRL+ Q ESM RFYK   LLIEF   KAFSLQ   +I  +I  TNIVSKL LL LHFP+LRILWSR+ H TV LFK +K      D++ A
Sbjct:  594 SLEVVDPMDSVVLCTYEQATEHGYGASAFLEDIMPSCIILYDPDMAFIREVEVFHASHNAPLE---IYFLMYDESTEQQSYLSEIQREKRSFDKLIHQKAHLMMPANVY--DLPLHMKLRQQTVEYSMDTRTGGRAKSHRTGV-KVVVDVREFRSALPSMLHKEGLFVLPVTLEIGDYVLSPEICVERKSISDLFGSLNSGRLFNQAESMRRFYKTPVLLIEFTQGKAFSLQDVSEIGPEISATNIVSKLTLLILHFPSLRILWSRSPHATVDLFKIVKKYQDEPDMEAA 877          
BLAST of EWM24598.1 vs. NCBI_GenBank
Match: gi|675174325|ref|XP_008896047.1| (hypothetical protein PPTG_03993 [Phytophthora parasitica INRA-310] >gi|568008968|gb|ETL83182.1| hypothetical protein L917_16816 [Phytophthora parasitica] >gi|568103709|gb|ETN18366.1| hypothetical protein PPTG_03993 [Phytophthora parasitica INRA-310] >gi|570971104|gb|ETP34223.1| hypothetical protein F442_17414 [Phytophthora parasitica P10297] >gi|970659631|gb|KUF97255.1| hypothetical protein AM588_10011361 [Phytophthora nicotianae])

HSP 1 Score: 269.626 bits (688), Expect = 2.406e-78
Identity = 145/290 (50.00%), Postives = 190/290 (65.52%), Query Frame = 0
Query:   96 AFEEGDRWQHVIMITYSQA----YTNMKLIEEVYPDAIILYDPDAQFVREVEV-HQARRPPTETLRVYFMVYEESVEEQRYLSALTREKESFERLLVEKKHMVMPASLYAESLPNPGSYIDKLV---ADTRALTRGQPVRPACARVVVDVREFRSSLPNLLHAGGLDVVPLTLAVGDFVLTPEVVIERKSVADLFGSFGSGRLYTQVESMLRFYKAATLLIEFQDDKAFSLQAPGDITDDIQVTNIVSKLVLLTLHFPALRILWSRNSHQTVLLFKALKAGNAPVDVQKA 377
            + E  D    V++ TY QA    Y     +E++ P  IILYDPD  F+REVEV H +   P E   +YF++Y+ES E+Q YLS + REK SF++L+ +K H++MPA++Y   LP       + V    DTR   R +  R    +VVVDVREFRS+LP++LH  GL V+P+TL +GD+VL+PE+ +ERKS++DLFGS  SGRL+ Q ESM RFYK   LLIEF   KAFSLQ   +I  +I  TNIVSKL LL LHFP+LRILWSR+ H TV LFK +K      D++ A
Sbjct:  594 SLEVVDPMDSVVLCTYEQATEHGYGASAFLEDIMPSCIILYDPDMAFIREVEVFHASHNAPLE---IYFLMYDESTEQQSYLSEIQREKRSFDKLIHQKAHLMMPANVY--DLPLHMKLRQQTVEYSMDTRTGGRAKSHRTGV-KVVVDVREFRSALPSMLHKEGLFVLPVTLEIGDYVLSPEICVERKSISDLFGSLNSGRLFNQAESMRRFYKTPVLLIEFTQGKAFSLQDVSEIGPEISATNIVSKLTLLILHFPSLRILWSRSPHATVDLFKIVKKYQDEPDMEAA 877          
BLAST of EWM24598.1 vs. NCBI_GenBank
Match: gi|567950794|gb|ETK76502.1| (hypothetical protein L915_17092 [Phytophthora parasitica] >gi|567979461|gb|ETL29940.1| hypothetical protein L916_16988 [Phytophthora parasitica] >gi|568038895|gb|ETM36409.1| hypothetical protein L914_16896 [Phytophthora parasitica] >gi|570317061|gb|ETO65009.1| hypothetical protein F444_17601 [Phytophthora parasitica P1976] >gi|570940842|gb|ETP06099.1| hypothetical protein F441_17428 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 269.626 bits (688), Expect = 2.507e-78
Identity = 145/290 (50.00%), Postives = 190/290 (65.52%), Query Frame = 0
Query:   96 AFEEGDRWQHVIMITYSQA----YTNMKLIEEVYPDAIILYDPDAQFVREVEV-HQARRPPTETLRVYFMVYEESVEEQRYLSALTREKESFERLLVEKKHMVMPASLYAESLPNPGSYIDKLV---ADTRALTRGQPVRPACARVVVDVREFRSSLPNLLHAGGLDVVPLTLAVGDFVLTPEVVIERKSVADLFGSFGSGRLYTQVESMLRFYKAATLLIEFQDDKAFSLQAPGDITDDIQVTNIVSKLVLLTLHFPALRILWSRNSHQTVLLFKALKAGNAPVDVQKA 377
            + E  D    V++ TY QA    Y     +E++ P  IILYDPD  F+REVEV H +   P E   +YF++Y+ES E+Q YLS + REK SF++L+ +K H++MPA++Y   LP       + V    DTR   R +  R    +VVVDVREFRS+LP++LH  GL V+P+TL +GD+VL+PE+ +ERKS++DLFGS  SGRL+ Q ESM RFYK   LLIEF   KAFSLQ   +I  +I  TNIVSKL LL LHFP+LRILWSR+ H TV LFK +K      D++ A
Sbjct:  594 SLEVVDPMDSVVLCTYEQATEHGYGASAFLEDIMPSCIILYDPDMAFIREVEVFHASHNAPLE---IYFLMYDESTEQQSYLSEIQREKRSFDKLIHQKAHLMMPANVY--DLPLHMKLRQQTVEYSMDTRTGGRAKSHRTGV-KVVVDVREFRSALPSMLHKEGLFVLPVTLEIGDYVLSPEICVERKSISDLFGSLNSGRLFNQAESMRRFYKTPVLLIEFTQGKAFSLQDVSEIGPEISATNIVSKLTLLILHFPSLRILWSRSPHATVDLFKIVKKYQDEPDMEAA 877          
BLAST of EWM24598.1 vs. NCBI_GenBank
Match: gi|1214706837|gb|OWZ18322.1| (DNA repair endonuclease [Phytophthora megakarya])

HSP 1 Score: 269.626 bits (688), Expect = 2.469e-77
Identity = 165/380 (43.42%), Postives = 226/380 (59.47%), Query Frame = 0
Query:   10 AEGSARATRAKGGGDGGRGEGGSTAVAMRLEEHTRTERPLPAGTGRGRRRSRPWGGKGERSKYE-RARELFD-RMGGGGSGMATAG--EGAFEEGDRWQHVIMITYSQA----YTNMKLIEEVYPDAIILYDPDAQFVREVEV-HQARRPPTETLRVYFMVYEESVEEQRYLSALTREKESFERLLVEKKHMVMPASLYAESLPNPGSYIDKLV---ADTRALTRGQPVRPACARVVVDVREFRSSLPNLLHAGGLDVVPLTLAVGDFVLTPEVVIERKSVADLFGSFGSGRLYTQVESMLRFYKAATLLIEFQDDKAFSLQAPGDITDDIQVTNIVSKLVLLTLHFPALRILWSRNSHQTVLLFKALKAGNAPVDVQKA 377
            + GS R  ++      GR E   ++ +  ++EHT TE    +  G             E S+ E +A+  FD R+    S    +G    + E  D    V++ TY QA    Y     +E++ P  I+LYDPD  F+REVEV H +   P E   +YFM+Y+ES E+Q YLS + REK +F++L+ +K H++MPA++Y   LP       + V    DTR   R +  R A  +VVVDVREFRS+LP++LH  GL V+P+TL +GD+VL+PE+ +ERKS++DLFGS  SGRL+ Q ESM RFYK   LLIEF   KAFSLQ   ++  +I  TNIVSKL LL LHFP+LRILWSR+ H TV LFK +K      D++ A
Sbjct:  752 SSGSKRKQKSAKTKKRGREESSQSSYS-DVQEHT-TE---VSSFGISSAELEAITAAQEISEQESKAKMFFDGRLRASRSQNQPSGTPNLSLEVVDPADSVVLCTYEQATEHGYVASAFLEDLMPTCIVLYDPDMAFIREVEVFHASHIAPLE---IYFMMYDESTEQQSYLSEIQREKRAFDKLIHQKAHLMMPANVY--DLPLHMKLRQQTVEYSMDTRTGGRAKSHR-AGVKVVVDVREFRSALPSMLHKEGLFVLPVTLEIGDYVLSPEICVERKSISDLFGSLNSGRLFNQAESMRRFYKTPVLLIEFTQGKAFSLQDASELGPEISATNIVSKLTLLILHFPSLRILWSRSPHATVDLFKIIKKYQDEPDMEAA 1120          
BLAST of EWM24598.1 vs. NCBI_GenBank
Match: gi|970646421|gb|KUF86589.1| (DNA repair endonuclease XPF [Phytophthora nicotianae])

HSP 1 Score: 269.24 bits (687), Expect = 3.699e-77
Identity = 145/290 (50.00%), Postives = 190/290 (65.52%), Query Frame = 0
Query:   96 AFEEGDRWQHVIMITYSQA----YTNMKLIEEVYPDAIILYDPDAQFVREVEV-HQARRPPTETLRVYFMVYEESVEEQRYLSALTREKESFERLLVEKKHMVMPASLYAESLPNPGSYIDKLV---ADTRALTRGQPVRPACARVVVDVREFRSSLPNLLHAGGLDVVPLTLAVGDFVLTPEVVIERKSVADLFGSFGSGRLYTQVESMLRFYKAATLLIEFQDDKAFSLQAPGDITDDIQVTNIVSKLVLLTLHFPALRILWSRNSHQTVLLFKALKAGNAPVDVQKA 377
            + E  D    V++ TY QA    Y     +E++ P  IILYDPD  F+REVEV H +   P E   +YF++Y+ES E+Q YLS + REK SF++L+ +K H++MPA++Y   LP       + V    DTR   R +  R    +VVVDVREFRS+LP++LH  GL V+P+TL +GD+VL+PE+ +ERKS++DLFGS  SGRL+ Q ESM RFYK   LLIEF   KAFSLQ   +I  +I  TNIVSKL LL LHFP+LRILWSR+ H TV LFK +K      D++ A
Sbjct:  874 SLEVVDPMDSVVLCTYEQATEHGYGASAFLEDIMPSCIILYDPDMAFIREVEVFHASHNAPLE---IYFLMYDESTEQQSYLSEIQREKRSFDKLIHQKAHLMMPANVY--DLPLHMKLRQQTVEYSMDTRTGGRAKSHRTG-VKVVVDVREFRSALPSMLHKEGLFVLPVTLEIGDYVLSPEICVERKSISDLFGSLNSGRLFNQAESMRRFYKTPVLLIEFTQGKAFSLQDVSEIGPEISATNIVSKLTLLILHFPSLRILWSRSPHATVDLFKIVKKYQDEPDMEAA 1157          
BLAST of EWM24598.1 vs. NCBI_GenBank
Match: gi|695396986|ref|XP_009521627.1| (hypothetical protein PHYSODRAFT_327253 [Phytophthora sojae] >gi|348686524|gb|EGZ26339.1| hypothetical protein PHYSODRAFT_327253 [Phytophthora sojae])

HSP 1 Score: 266.544 bits (680), Expect = 3.920e-77
Identity = 142/290 (48.97%), Postives = 189/290 (65.17%), Query Frame = 0
Query:   96 AFEEGDRWQHVIMITYSQA----YTNMKLIEEVYPDAIILYDPDAQFVREVEV-HQARRPPTETLRVYFMVYEESVEEQRYLSALTREKESFERLLVEKKHMVMPASLYAESLPNPGSYIDKLV---ADTRALTRGQPVRPACARVVVDVREFRSSLPNLLHAGGLDVVPLTLAVGDFVLTPEVVIERKSVADLFGSFGSGRLYTQVESMLRFYKAATLLIEFQDDKAFSLQAPGDITDDIQVTNIVSKLVLLTLHFPALRILWSRNSHQTVLLFKALKAGNAPVDVQKA 377
            + E  D    V++ TY QA    Y     +E++ P  I+LYDPD  F+REVEV H     P   L +YFM+Y+ES E+Q YLS + REK +F++L+ +K H++MPA++Y   LP       + V    DTR   R +  R    +VVVDVREFRS+LP++LH  GL V+P+TL +GD++L+PE+ +ERKS++DLFGS  SGRL+ Q ESM RFYK   LLIEF   KAFSLQ   ++  +I  TNIVSKL LL LHFP+LRILWSR+ H TV LFK +K      D++ A
Sbjct:  603 SLEVVDPLDSVVLCTYEQATQHGYGASAFLEDLMPSCIVLYDPDMAFIREVEVFHATHVAP---LEIYFMMYDESTEQQSYLSEIQREKRAFDKLIHQKAHLMMPANVY--DLPLHMKLRQQTVEYSMDTRTGGRAKSHRGG-VKVVVDVREFRSALPSMLHKEGLFVLPVTLEIGDYILSPEICVERKSISDLFGSLNSGRLFNQAESMRRFYKTPVLLIEFTQGKAFSLQDVSELGSEITATNIVSKLTLLILHFPSLRILWSRSPHATVDLFKIIKKYQDEPDMEAA 886          
BLAST of EWM24598.1 vs. NCBI_GenBank
Match: gi|301103506|ref|XP_002900839.1| (DNA repair endonuclease XPF, putative [Phytophthora infestans T30-4] >gi|262101594|gb|EEY59646.1| DNA repair endonuclease XPF, putative [Phytophthora infestans T30-4])

HSP 1 Score: 265.388 bits (677), Expect = 9.114e-77
Identity = 143/290 (49.31%), Postives = 190/290 (65.52%), Query Frame = 0
Query:   96 AFEEGDRWQHVIMITYSQA----YTNMKLIEEVYPDAIILYDPDAQFVREVEV-HQARRPPTETLRVYFMVYEESVEEQRYLSALTREKESFERLLVEKKHMVMPASLYAESLPNPGSYIDKLV---ADTRALTRGQPVRPACARVVVDVREFRSSLPNLLHAGGLDVVPLTLAVGDFVLTPEVVIERKSVADLFGSFGSGRLYTQVESMLRFYKAATLLIEFQDDKAFSLQAPGDITDDIQVTNIVSKLVLLTLHFPALRILWSRNSHQTVLLFKALKAGNAPVDVQKA 377
            + E  D    V++ TY QA    Y     +E++ P  I+LYDPD  F+REVEV H +   P E   +YF++Y+ES E+Q YLS + REK +F++L+ +K H++MPA++Y   LP       + V    DTR   R +  R A  +VVVDVREFRS+LP++LH  GL V+P+TL +GD+VL+PE+ +ERKS++DLFGS  SGRL+ Q ESM RFYK   LLIEF   KAFSLQ   +I  +I  TNIVSKL LL LHFP+LR+LWSR  H TV LFK +K      D++ A
Sbjct:  575 SLEVVDPMDSVVLCTYEQATEHGYGASAFLEDLMPSCIVLYDPDMAFIREVEVFHASHVAPLE---IYFLMYDESTEQQSYLSEIQREKRAFDKLIHQKAHLMMPANVY--DLPLHMKLRQQTVEYSMDTRTGGRAKSHR-AGVKVVVDVREFRSALPSMLHKEGLFVLPVTLEIGDYVLSPEICVERKSISDLFGSLNSGRLFNQAESMRRFYKTPVLLIEFTQGKAFSLQDVSEIGPEISATNIVSKLTLLILHFPSLRLLWSRTPHATVDLFKIVKRYQDEPDMEAA 858          
BLAST of EWM24598.1 vs. NCBI_GenBank
Match: gi|953492804|emb|CEG44750.1| (dna repair endonuclease xpf [Plasmopara halstedii])

HSP 1 Score: 265.003 bits (676), Expect = 1.494e-76
Identity = 141/288 (48.96%), Postives = 189/288 (65.62%), Query Frame = 0
Query:   97 FEEGDRWQHVIMITYSQA----YTNMKLIEEVYPDAIILYDPDAQFVREVEVHQARRPPTETLRVYFMVYEESVEEQRYLSALTREKESFERLLVEKKHMVMPASLYAESLPNPGSYIDKLV---ADTRALTRGQPVRPACARVVVDVREFRSSLPNLLHAGGLDVVPLTLAVGDFVLTPEVVIERKSVADLFGSFGSGRLYTQVESMLRFYKAATLLIEFQDDKAFSLQAPGDITDDIQVTNIVSKLVLLTLHFPALRILWSRNSHQTVLLFKALKAGNAPVDVQKA 377
             E  D    V++ TY QA    Y     +E++ P  IILYDPD  F+REVEV  A    T+ L VYF++Y+ES E+Q YLS + REK +F++L+ +K H++MP ++Y   LP       + V    DTR   R +  R A  +VVVDVREFRS+LP++LH  GL V+P+TL +GD++L+PE+ +ERKS++DLFGS  SGRL+ Q ESM RFYK   LLIEF   K+FSLQ   ++  DI  +NI+SKL LL LHFP+LRILWSR+ H TV LFK +K      D++ A
Sbjct:  592 LEVVDHSDTVVLCTYDQAANHGYGASAFLEDMMPSYIILYDPDMAFIREVEVFHASH--TDPLEVYFVMYDESTEQQSYLSEIQREKRAFDKLIHQKAHLMMPTNVY--DLPLHMKLRQQNVEYSMDTRTGGRARSHR-AGIKVVVDVREFRSALPSMLHKEGLFVLPVTLEIGDYILSPEICVERKSISDLFGSLNSGRLFNQAESMRRFYKTPVLLIEFSQGKSFSLQDVSELGADINASNIISKLTLLILHFPSLRILWSRSPHATVNLFKIIKRYQEEPDIEAA 874          
BLAST of EWM24598.1 vs. NCBI_GenBank
Match: gi|669150262|ref|XP_008610693.1| (hypothetical protein SDRG_06677 [Saprolegnia diclina VS20] >gi|530737689|gb|EQC35931.1| hypothetical protein SDRG_06677 [Saprolegnia diclina VS20])

HSP 1 Score: 260.381 bits (664), Expect = 1.640e-75
Identity = 130/280 (46.43%), Postives = 188/280 (67.14%), Query Frame = 0
Query:  101 DRWQHVIMITYSQAYTNMKLIEEVYPDAIILYDPDAQFVREVEVHQARRPPTETLRVYFMVYEESVEEQRYLSALTREKESFERLLVEKKHMVMPASLYAESLPNPGSYIDKLVADTRALTRGQPVRPACARVVVDVREFRSSLPNLLHAGGLDVVPLTLAVGDFVLTPEVVIERKSVADLFGSFGSGRLYTQVESMLRFYKAATLLIEFQDDKAFSLQAPGDITDDIQVTNIVSKLVLLTLHFPALRILWSRNSHQTVLLFKALKAGNAPVDVQKALVS 380
            DR  H+++ TY+QA     L+ +V P+ +ILYDPD  F+RE+EV+ A     + L VYFMVYEES E+Q YL+ + REKE+FE+L+ +K+HMV+P +++            +   DTR   R + V+     V+VDVREFRS+LP++LH  G+ + P+TL VGD++L+ ++ +ERKS++DLFGS  +GRL+ Q E M+R Y+   LLIEF  +K F+LQ  G+IT DI+  +I SKL LL LHFP LR LWS++ H TV LF+ +K G    DV+ A+ +
Sbjct:  510 DRKDHLVICTYAQAKRCATLLHDVQPEHVILYDPDVAFIRELEVYHAHYA-DDPLSVYFMVYEESAEQQAYLTEVQREKEAFEKLIRQKEHMVIPLNVFDIPAHIKAKQAPQYSLDTRTGGRAR-VQLVSHSVIVDVREFRSALPSMLHKEGMVLHPVTLEVGDYILSSQMCVERKSISDLFGSLNNGRLFNQAEMMIRHYQTPLLLIEFNPEKPFALQEAGEITSDIKHNSITSKLSLLVLHFPQLRFLWSKSPHATVELFRLVKKGQDDPDVEAAMAA 787          
The following BLAST results are available for this feature:
BLAST of EWM24598.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106114|gb|EWM24598.1|0.000e+0100.00dna repair endonuclease xpf [Nannochloropsis gadit... [more]
gi|566013372|gb|ETI36283.1|2.064e-7850.00hypothetical protein F443_17559 [Phytophthora para... [more]
gi|675174325|ref|XP_008896047.1|2.406e-7850.00hypothetical protein PPTG_03993 [Phytophthora para... [more]
gi|567950794|gb|ETK76502.1|2.507e-7850.00hypothetical protein L915_17092 [Phytophthora para... [more]
gi|1214706837|gb|OWZ18322.1|2.469e-7743.42DNA repair endonuclease [Phytophthora megakarya][more]
gi|970646421|gb|KUF86589.1|3.699e-7750.00DNA repair endonuclease XPF [Phytophthora nicotian... [more]
gi|695396986|ref|XP_009521627.1|3.920e-7748.97hypothetical protein PHYSODRAFT_327253 [Phytophtho... [more]
gi|301103506|ref|XP_002900839.1|9.114e-7749.31DNA repair endonuclease XPF, putative [Phytophthor... [more]
gi|953492804|emb|CEG44750.1|1.494e-7648.96dna repair endonuclease xpf [Plasmopara halstedii][more]
gi|669150262|ref|XP_008610693.1|1.640e-7546.43hypothetical protein SDRG_06677 [Saprolegnia dicli... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6102rna6102Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications