EWM24575.1, cds6079 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24575.1 vs. NCBI_GenBank
Match: gi|585106091|gb|EWM24575.1| (trna specific adenosine deaminase [Nannochloropsis gaditana]) HSP 1 Score: 394.815 bits (1013), Expect = 4.416e-139 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
Query: 1 MVEFTAEEINFMKIALAEGQIAIEEGEVPVGVVFVYRPDPLKNTACSIDSSVPFFGPGEILGKGHNRTNATKNGTRHAELVIVDEILARGHPPSVFQECDVYVTCEPCIMCAGALSLLKIRRVVFGCKNDRFGGCGSILSVHGAPHLRHRYVADAGLMENEAIRLFKSFYARENRQAPDTKRRKKGLSAVT 191
MVEFTAEEINFMKIALAEGQIAIEEGEVPVGVVFVYRPDPLKNTACSIDSSVPFFGPGEILGKGHNRTNATKNGTRHAELVIVDEILARGHPPSVFQECDVYVTCEPCIMCAGALSLLKIRRVVFGCKNDRFGGCGSILSVHGAPHLRHRYVADAGLMENEAIRLFKSFYARENRQAPDTKRRKKGLSAVT
Sbjct: 1 MVEFTAEEINFMKIALAEGQIAIEEGEVPVGVVFVYRPDPLKNTACSIDSSVPFFGPGEILGKGHNRTNATKNGTRHAELVIVDEILARGHPPSVFQECDVYVTCEPCIMCAGALSLLKIRRVVFGCKNDRFGGCGSILSVHGAPHLRHRYVADAGLMENEAIRLFKSFYARENRQAPDTKRRKKGLSAVT 191
BLAST of EWM24575.1 vs. NCBI_GenBank
Match: gi|299115717|emb|CBN74282.1| (tRNA specific adenosine deaminase [Ectocarpus siliculosus]) HSP 1 Score: 172.94 bits (437), Expect = 1.605e-51 Identity = 90/186 (48.39%), Postives = 119/186 (63.98%), Query Frame = 0
Query: 5 TAEEIN--FMKIALAEGQIAIEEGEVPVGVVFVYRPDPLKNTACSIDSSVPFFGPGEILGKGHNRTNATKNGTRHAELVIVDEILARGHPPSVFQECDVYVTCEPCIMCAGALSLLKIRRVVFGCKNDRFGGCGSILSVHGA--PHLRHRYVADAGLMENEAIRLFKSFYARENRQAPDTKRRKKG 186
+++E N +M++AL E ++A+ +GEVPVG V V++P I+ GHN T+ N TRHAELV +D IL S+ +ECD++VTCEPCIMCA AL +KI+ VVFGC NDRFGGCGS+LSVH P H Y +GL+ +EAI LFK FY+R+N +AP+ KRRK G
Sbjct: 9 SSDEQNAVYMRLALKEAEMALSKGEVPVGCVVVHKP------------------TARIISCGHNETSEAFNATRHAELVAIDGILRAQTDLSLLRECDLFVTCEPCIMCAAALRDVKIKTVVFGCSNDRFGGCGSVLSVHDGSLPISGHTYPCHSGLLADEAIALFKQFYSRQNVKAPEPKRRKMG 176
BLAST of EWM24575.1 vs. NCBI_GenBank
Match: gi|223997732|ref|XP_002288539.1| (hypothetical protein THAPSDRAFT_268551 [Thalassiosira pseudonana CCMP1335] >gi|220975647|gb|EED93975.1| hypothetical protein THAPSDRAFT_268551 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 162.925 bits (411), Expect = 9.480e-48 Identity = 86/190 (45.26%), Postives = 113/190 (59.47%), Query Frame = 0
Query: 8 EINFMKIALAEGQIAIEEGEVPVGVVFVYRPDPLKNTACSIDSSVPFFGPGE-ILGKGHNRTNATKNGTRHAELVIVDEILARGH-------PPSVFQECDVYVTCEPCIMCAGALSLLKIRRVVFGCKNDRFGGCGSILSVHGAPHLR----HRYVADAGLMENEAIRLFKSFYARENRQAPDTKRRKK 185
E FM+ AL + A++ GEVPVG + VP+ I+ G N+ NAT++ TRHAE+V +D +L +G PP +F CD+YVTCEPCIMCA ALS++ I RV FGC+NDRFGGCGSIL +H L+ H + GL+E EA+ L +SFY REN APD KR++K
Sbjct: 2 EKYFMRQALCVARTALDIGEVPVGCI------------------VPYMASHSVIVSHGANQVNATRDATRHAEIVAIDRMLTKGRSSDQLKLPPEIFANCDLYVTCEPCIMCAAALSVMGIGRVFFGCRNDRFGGCGSILHLHKEDTLQSSKHHGFTIHGGLLEEEAVALLRSFYDRENFHAPDHKRKRK 173
BLAST of EWM24575.1 vs. NCBI_GenBank
Match: gi|673038182|ref|XP_008873052.1| (hypothetical protein H310_08906 [Aphanomyces invadans] >gi|574471169|gb|ETV98177.1| hypothetical protein H310_08906 [Aphanomyces invadans]) HSP 1 Score: 162.54 bits (410), Expect = 1.346e-47 Identity = 93/187 (49.73%), Postives = 116/187 (62.03%), Query Frame = 0
Query: 5 TAEEINFMKIALAEGQIAIEEGEVPVGVVFVYRPDPLKNTACSIDSSVPFFGPGEILGKGHNRTNATKNGTRHAELVIVDEILAR-GHPPSVFQECDVYVTCEPCIMCAGALSLLKIRRVVFGCKNDRFGGCGSILSVHGA---PHLRHR--YVADAGLMENEAIRLFKSFYARENRQAPDTKRRKK 185
T ++ FMK ALAEG A++ GEVPVG VFV L N E++G+G NRTN N T+HAELV +D IL + S F+EC +YVTCEPCIMCA AL+LL ++RVVFGC NDRFGG GSILS+ A P H Y GLM+NEAI L K FY R N + ++K+++K
Sbjct: 9 TRDDAYFMKEALAEGMYALDRGEVPVGCVFV-----LNN---------------EVIGRGGNRTNELFNATKHAELVAIDAILEEEAYTSSTFRECTLYVTCEPCIMCAAALALLHVKRVVFGCHNDRFGGNGSILSLQDANAFPGNSHHTGYPITHGLMKNEAIALLKDFYDRGNPRVENSKKKRK 175
BLAST of EWM24575.1 vs. NCBI_GenBank
Match: gi|1173953423|gb|OQS00968.1| (hypothetical protein ACHHYP_02064 [Achlya hypogyna]) HSP 1 Score: 162.155 bits (409), Expect = 1.580e-47 Identity = 89/184 (48.37%), Postives = 113/184 (61.41%), Query Frame = 0
Query: 6 AEEINFMKIALAEGQIAIEEGEVPVGVVFVYRPDPLKNTACSIDSSVPFFGPGEILGKGHNRTNATKNGTRHAELVIVDEILARGHPPSVFQECDVYVTCEPCIMCAGALSLLKIRRVVFGCKNDRFGGCGSILSVH---GAPHLRH-RYVADAGLMENEAIRLFKSFYARENRQAPDTKRRKK 185
AE FM AL EG+ A+E GEVPVG VFV G ++G+G NRTN N T+HAELV ++ ILA G P VF++C +YVTCEPCIMCA AL+LL I+ VVFGC NDRFGG GSI S+H P H Y G+M+NEA+ L K+FY R N + ++K+++K
Sbjct: 2 AEHGGFMAEALREGEKALERGEVPVGCVFVL--------------------DGRVIGRGGNRTNELCNATKHAELVAIEAILADGRSPEVFRDCTLYVTCEPCIMCAAALALLHIKNVVFGCHNDRFGGNGSIFSLHEPTALPDPEHVGYPITTGVMKNEAVALLKNFYDRGNPRVDNSKKKRK 165
BLAST of EWM24575.1 vs. NCBI_GenBank
Match: gi|1032151982|gb|OAO15477.1| (hypothetical protein AV274_2816 [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 161.77 bits (408), Expect = 1.972e-47 Identity = 84/181 (46.41%), Postives = 110/181 (60.77%), Query Frame = 0
Query: 10 NFMKIALAEGQIAIEEGEVPVGVVFVYRPDPLKNTACSIDSSVPFFGPGEILGKGHNRTNATKNGTRHAELVIVDEILARGHPP-SVFQECDVYVTCEPCIMCAGALSLLKIRRVVFGCKNDRFGGCGSILSVHGAPHLR---HRYVADAGLMENEAIRLFKSFYARENRQAPDTKRRKKG 186
+++++A E +IA E EVP+G VFV G+I+ KGHNRTN T N T+HAE+V + +L H SVF++CD+YVT EPCIMCA AL+ + IRRVVFG NDRFGGCGS+LS+H H YV G+ + +I L + FY REN +APD KRR+K
Sbjct: 7 DYVEMAFEEAEIAFGEKEVPIGCVFV--------------------KDGKIIAKGHNRTNHTGNATQHAEMVAISNVLYSNHNNVSVFKDCDLYVTIEPCIMCASALAQIGIRRVVFGASNDRFGGCGSVLSIHDQTEFDAGYHCYVVVRGVEKERSIELLQRFYNRENEKAPDEKRRRKA 167
BLAST of EWM24575.1 vs. NCBI_GenBank
Match: gi|1102184033|ref|XP_019026695.1| (cytidine and deoxycytidylate deaminase zinc-binding domain protein [Saitoella complicata NRRL Y-17804] >gi|813216657|dbj|GAO45999.1| hypothetical protein G7K_0244-t1 [Saitoella complicata NRRL Y-17804] >gi|1063232452|gb|ODQ55582.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein [Saitoella complicata NRRL Y-17804]) HSP 1 Score: 161.384 bits (407), Expect = 4.375e-47 Identity = 78/175 (44.57%), Postives = 104/175 (59.43%), Query Frame = 0
Query: 11 FMKIALAEGQIAIEEGEVPVGVVFVYRPDPLKNTACSIDSSVPFFGPGEILGKGHNRTNATKNGTRHAELVIVDEILARGHPPSVFQECDVYVTCEPCIMCAGALSLLKIRRVVFGCKNDRFGGCGSILSVHGAPHLRHRYVADAGLMENEAIRLFKSFYARENRQAPDTKRRKK 185
FM+ AL ++A+ E PVG VFV++ +++ +G N TN + NGTRHAE + +D ILA GHPPS+F+E D+YVT EPC+MCA AL L+IRRV FGC NDRFGGCGS+ +H P Y G EAI L + FY +EN +AP K +++
Sbjct: 13 FMRAALDMAELALNTDETPVGCVFVHQ--------------------NKVIARGMNDTNKSLNGTRHAEFIGIDTILALGHPPSIFEEIDLYVTVEPCVMCASALRQLRIRRVYFGCGNDRFGGCGSVFKIHSDPDPDPAYRVFPGFWREEAIMLLRKFYVQENEKAPAPKAKRE 167
BLAST of EWM24575.1 vs. NCBI_GenBank
Match: gi|1190783398|gb|OTA28794.1| (hypothetical protein BTJ68_09853 [Hortaea werneckii EXF-2000]) HSP 1 Score: 161.384 bits (407), Expect = 1.217e-46 Identity = 82/174 (47.13%), Postives = 106/174 (60.92%), Query Frame = 0
Query: 11 FMKIALAEGQIAIEEGEVPVGVVFVYRPDPLKNTACSIDSSVPFFGPGEILGKGHNRTNATKNGTRHAELVIVDEILARGHPPSVFQECDVYVTCEPCIMCAGALSLLKIRRVVFGCKNDRFGGCGSILSVHGAPHLRHRYVADAGLMENEAIRLFKSFYARENRQAPDTKRRK 184
FM+ A+ ++A+ E PVG VFV+ G+I+G+G N TNA+ NGTRHAE V + EI+A+ HPPS+ +E D+YVT EPCIMCA AL +IR V FGC NDRFGGCG +++VH P L Y GL EAI L + FY +EN +APD K +K
Sbjct: 15 FMRKAIEMAELALSSDETPVGCVFVHN--------------------GKIIGRGINGTNASLNGTRHAEFVALAEIMAK-HPPSILRETDLYVTVEPCIMCASALRQYRIRAVYFGCLNDRFGGCGGVMTVHSDPGLDPAYPVYGGLFREEAIMLLRKFYVQENNKAPDPKPKK 167
BLAST of EWM24575.1 vs. NCBI_GenBank
Match: gi|1190772299|gb|OTA18781.1| (hypothetical protein BTJ68_15340 [Hortaea werneckii EXF-2000]) HSP 1 Score: 161.384 bits (407), Expect = 1.284e-46 Identity = 82/174 (47.13%), Postives = 106/174 (60.92%), Query Frame = 0
Query: 11 FMKIALAEGQIAIEEGEVPVGVVFVYRPDPLKNTACSIDSSVPFFGPGEILGKGHNRTNATKNGTRHAELVIVDEILARGHPPSVFQECDVYVTCEPCIMCAGALSLLKIRRVVFGCKNDRFGGCGSILSVHGAPHLRHRYVADAGLMENEAIRLFKSFYARENRQAPDTKRRK 184
FM+ A+ ++A+ E PVG VFV+ G+I+G+G N TNA+ NGTRHAE V + EI+A+ HPPS+ +E D+YVT EPCIMCA AL +IR V FGC NDRFGGCG +++VH P L Y GL EAI L + FY +EN +APD K +K
Sbjct: 15 FMRKAIEMAELALSSDETPVGCVFVHN--------------------GKIIGRGINGTNASLNGTRHAEFVALAEIMAK-HPPSILRETDLYVTVEPCIMCASALRQYRIRAVYFGCLNDRFGGCGGVMTVHSDPGLDPAYPVYGGLFREEAIMLLRKFYVQENNKAPDPKPKK 167
BLAST of EWM24575.1 vs. NCBI_GenBank
Match: gi|627813457|ref|XP_007680076.1| (hypothetical protein BAUCODRAFT_114576 [Baudoinia panamericana UAMH 10762] >gi|449296701|gb|EMC92720.1| hypothetical protein BAUCODRAFT_114576 [Baudoinia panamericana UAMH 10762]) HSP 1 Score: 159.073 bits (401), Expect = 8.716e-46 Identity = 80/174 (45.98%), Postives = 105/174 (60.34%), Query Frame = 0
Query: 11 FMKIALAEGQIAIEEGEVPVGVVFVYRPDPLKNTACSIDSSVPFFGPGEILGKGHNRTNATKNGTRHAELVIVDEILARGHPPSVFQECDVYVTCEPCIMCAGALSLLKIRRVVFGCKNDRFGGCGSILSVHGAPHLRHRYVADAGLMENEAIRLFKSFYARENRQAPDTKRRK 184
FM+ A+ ++A+ E PVG VFV+ GE++G+G N TNA+ NGTRHAE V + EI+A+ HPPS+ ++ D+YVT EPCIMCA AL IR V FGC NDRFGGCG +++VH P + Y GL EAI L + FY +EN +APD K +K
Sbjct: 15 FMRKAIEMAELALSSDETPVGCVFVHD--------------------GEVIGRGINGTNASLNGTRHAEFVALAEIMAK-HPPSILKDTDLYVTVEPCIMCASALRQFGIRAVYFGCLNDRFGGCGGVMTVHSDPGVDPPYPVYGGLFREEAIMLLRKFYVQENNKAPDPKPKK 167 The following BLAST results are available for this feature:
BLAST of EWM24575.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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