EWM24614.1, cds6066 (CDS) Nannochloropsis gaditana

Overview
NameEWM24614.1
Unique Namecds6066
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:527734..527779 +
Alignment locationCM002467.1:527856..528106 +
Alignment locationCM002467.1:528270..529007 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24614.1
Productpeptidase c13-like protein
Orig transcript idgnl|cribi|Naga_100171g6.2672.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:527734..527779 +
CM002467.1supercontigCM002467.1:527856..528106 +
CM002467.1supercontigCM002467.1:528270..529007 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003923GPI-anchor transamidase activity
GO:0008233peptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006464cellular protein modification process
GO:0006629lipid metabolic process
GO:0016255attachment of GPI anchor to protein
GO:0006508proteolysis
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO:0016020membrane
GO:0042765GPI-anchor transamidase complex
Vocabulary: INTERPRO
TermDefinition
IPR028361GPI_transamidase
IPR001096Peptidase_C13
Homology
BLAST of EWM24614.1 vs. NCBI_GenBank
Match: gi|585106131|gb|EWM24614.1| (peptidase c13-like protein [Nannochloropsis gaditana])

HSP 1 Score: 714.531 bits (1843), Expect = 0.000e+0
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0
Query:    1 MLADDIPCNARNARPGGVYHSTTHTIDLCANGLEVDYKNEEVTVENFVRVLTGRHPPGWPISKRLGSGNTSRVFIYMTGHGGDEFLKFHNHEEISSEDLAHTLQDMKTAGRYQDLFFVVDTCQGGTLFRRFRTPGVLAVGSSGQGENSFAHQNDMVLGVALVDRFTDASCQYLHKLADRATAPQLSSPLGLLSQVPLSMLLGSYNPVQLKSTPVLRSDLFEFEASREDEAEEVGDLGNHRGAATGTDSRLAQTAVTHFFGQEERLRVVSILEAAKDEEIESVGSRNTCSRTVEAIPVRLSQAHIDTLSTSPANHFEASYDRNSIMLSLLSLAMCAMNLRMCRIE 344
            MLADDIPCNARNARPGGVYHSTTHTIDLCANGLEVDYKNEEVTVENFVRVLTGRHPPGWPISKRLGSGNTSRVFIYMTGHGGDEFLKFHNHEEISSEDLAHTLQDMKTAGRYQDLFFVVDTCQGGTLFRRFRTPGVLAVGSSGQGENSFAHQNDMVLGVALVDRFTDASCQYLHKLADRATAPQLSSPLGLLSQVPLSMLLGSYNPVQLKSTPVLRSDLFEFEASREDEAEEVGDLGNHRGAATGTDSRLAQTAVTHFFGQEERLRVVSILEAAKDEEIESVGSRNTCSRTVEAIPVRLSQAHIDTLSTSPANHFEASYDRNSIMLSLLSLAMCAMNLRMCRIE
Sbjct:    1 MLADDIPCNARNARPGGVYHSTTHTIDLCANGLEVDYKNEEVTVENFVRVLTGRHPPGWPISKRLGSGNTSRVFIYMTGHGGDEFLKFHNHEEISSEDLAHTLQDMKTAGRYQDLFFVVDTCQGGTLFRRFRTPGVLAVGSSGQGENSFAHQNDMVLGVALVDRFTDASCQYLHKLADRATAPQLSSPLGLLSQVPLSMLLGSYNPVQLKSTPVLRSDLFEFEASREDEAEEVGDLGNHRGAATGTDSRLAQTAVTHFFGQEERLRVVSILEAAKDEEIESVGSRNTCSRTVEAIPVRLSQAHIDTLSTSPANHFEASYDRNSIMLSLLSLAMCAMNLRMCRIE 344          
BLAST of EWM24614.1 vs. NCBI_GenBank
Match: gi|585106130|gb|EWM24613.1| (peptidase c13-like protein [Nannochloropsis gaditana])

HSP 1 Score: 713.761 bits (1841), Expect = 0.000e+0
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0
Query:    1 MLADDIPCNARNARPGGVYHSTTHTIDLCANGLEVDYKNEEVTVENFVRVLTGRHPPGWPISKRLGSGNTSRVFIYMTGHGGDEFLKFHNHEEISSEDLAHTLQDMKTAGRYQDLFFVVDTCQGGTLFRRFRTPGVLAVGSSGQGENSFAHQNDMVLGVALVDRFTDASCQYLHKLADRATAPQLSSPLGLLSQVPLSMLLGSYNPVQLKSTPVLRSDLFEFEASREDEAEEVGDLGNHRGAATGTDSRLAQTAVTHFFGQEERLRVVSILEAAKDEEIESVGSRNTCSRTVEAIPVRLSQAHIDTLSTSPANHFEASYDRNSIMLSLLSLAMCAMNLRMCRIE 344
            MLADDIPCNARNARPGGVYHSTTHTIDLCANGLEVDYKNEEVTVENFVRVLTGRHPPGWPISKRLGSGNTSRVFIYMTGHGGDEFLKFHNHEEISSEDLAHTLQDMKTAGRYQDLFFVVDTCQGGTLFRRFRTPGVLAVGSSGQGENSFAHQNDMVLGVALVDRFTDASCQYLHKLADRATAPQLSSPLGLLSQVPLSMLLGSYNPVQLKSTPVLRSDLFEFEASREDEAEEVGDLGNHRGAATGTDSRLAQTAVTHFFGQEERLRVVSILEAAKDEEIESVGSRNTCSRTVEAIPVRLSQAHIDTLSTSPANHFEASYDRNSIMLSLLSLAMCAMNLRMCRIE
Sbjct:   70 MLADDIPCNARNARPGGVYHSTTHTIDLCANGLEVDYKNEEVTVENFVRVLTGRHPPGWPISKRLGSGNTSRVFIYMTGHGGDEFLKFHNHEEISSEDLAHTLQDMKTAGRYQDLFFVVDTCQGGTLFRRFRTPGVLAVGSSGQGENSFAHQNDMVLGVALVDRFTDASCQYLHKLADRATAPQLSSPLGLLSQVPLSMLLGSYNPVQLKSTPVLRSDLFEFEASREDEAEEVGDLGNHRGAATGTDSRLAQTAVTHFFGQEERLRVVSILEAAKDEEIESVGSRNTCSRTVEAIPVRLSQAHIDTLSTSPANHFEASYDRNSIMLSLLSLAMCAMNLRMCRIE 413          
BLAST of EWM24614.1 vs. NCBI_GenBank
Match: gi|667482531|gb|AIG55841.1| (secreted protein [Achlya hypogyna] >gi|1173945761|gb|OQR94354.1| GPI-anchor transamidase [Achlya hypogyna])

HSP 1 Score: 221.476 bits (563), Expect = 4.051e-66
Identity = 106/228 (46.49%), Postives = 149/228 (65.35%), Query Frame = 0
Query:    1 MLADDIPCNARNARPGGVYHSTTHTIDLCANGLEVDYKNEEVTVENFVRVLTGRHPPGWPISKRLGSGNTSRVFIYMTGHGGDEFLKFHNHEEISSEDLAHTLQDMKTAGRYQDLFFVVDTCQGGTLFRRFRTPGVLAVGSSGQGENSFAHQNDMVLGVALVDRFTDASCQYL--HKLADRATAPQLSSPLGLLSQVPLSMLLGSYNPVQLKSTPVLRSDLFEFEASR 226
            MLAD +PCNARN  PG +++S  H I+L    +EVDY+ +EV+V NF++VLTGRH PG P ++RL S   S VF++MTGHGGD FLKF + EE+SS D+A ++Q+M   GRY +LFF+VDTCQ G+L ++  +P V+ +GS+  G+NS+A+  D  +G++L+DRFT A+  YL  H     A+               L  L  SY+P  L STP  R++LF+   SR
Sbjct:   67 MLADQMPCNARNCYPGQMFNSNNHAINLYGEDVEVDYRGDEVSVANFIKVLTGRHEPGTPANRRLDSDEKSNVFVFMTGHGGDGFLKFQDFEELSSHDIADSIQEMHVKGRYHELFFMVDTCQAGSLAKQLYSPNVVTIGSASTGQNSYAYHTDYDIGLSLIDRFTYATLDYLQGHDTGREAS---------------LQDLFASYDPAMLYSTPEARTELFQRPLSR 279          
BLAST of EWM24614.1 vs. NCBI_GenBank
Match: gi|761926662|gb|KIY47881.1| (hypothetical protein FISHEDRAFT_17449, partial [Fistulina hepatica ATCC 64428])

HSP 1 Score: 220.32 bits (560), Expect = 1.133e-65
Identity = 103/220 (46.82%), Postives = 146/220 (66.36%), Query Frame = 0
Query:    1 MLADDIPCNARNARPGGVYHSTTHTIDLCANGLEVDYKNEEVTVENFVRVLTGRHPPGWPISKRLGSGNTSRVFIYMTGHGGDEFLKFHNHEEISSEDLAHTLQDMKTAGRYQDLFFVVDTCQGGTLFRRFRTPGVLAVGSSGQGENSFAHQNDMVLGVALVDRFTDASCQYLHKLADRATAPQLSSPLGLLSQVPLSMLLGSYNPVQLKSTPVLRSDLF 220
            ML DD  CN+RN  PG VY ST H +DL  + +EVDY+  EVTVENF+R+LTGR  P  P SKRL + + S +F+YMTGHGG EFLKF ++EEIS+ D+A   + M    RY ++FF+VDTCQ  T++ +F +P +LA GSS  GENS++H+ND+ LGVA++D +T    +Y+ +             +   S++ +  L  SY+P +++S P +RSDLF
Sbjct:   49 MLGDDTACNSRNQFPGSVYASTGHQLDLYGDNIEVDYRGYEVTVENFIRLLTGRVDPSLPRSKRLLTDDRSNIFVYMTGHGGSEFLKFQDNEEISAFDIADAFEQMHQKKRYNEIFFMVDTCQANTMYSKFYSPNILATGSSLLGENSYSHENDLSLGVAVIDSYTHYILEYMEQ-------------INKTSRLTMQDLFNSYDPKRIRSHPGVRSDLF 255          
BLAST of EWM24614.1 vs. NCBI_GenBank
Match: gi|1035965163|gb|OAY85470.1| (putative GPI-anchor transamidase [Ananas comosus])

HSP 1 Score: 219.935 bits (559), Expect = 1.272e-65
Identity = 107/221 (48.42%), Postives = 142/221 (64.25%), Query Frame = 0
Query:    1 MLADDIPCNARNARPGGVYHSTTHTIDLCANGLEVDYKNEEVTVENFVRVLTGRHPPGWPISKRLGSGNTSRVFIYMTGHGGDEFLKFHNHEEISSEDLAHTLQDMKTAGRYQDLFFVVDTCQGGTLFRRFRTPGVLAVGSSGQGENSFAHQNDMVLGVALVDRFTDASCQYLHKLADRATAPQLSSPLGLLSQVPLSMLLGSYNPVQLKSTPVLRSDLFE 221
            MLADD+ CNARN  P  V+++  H ++L  + +EVDY+  EVTVENF+RVLTGRH    P SKRL S   S + +YMTGHGGDEFLKF + EE+ S DLA  ++ MK   R+++L  +VDTCQ  TLF +  +PGVLA+GSS +GENS++H  D  +GV++VDRFT  +  +  K             L + S   L+ L  SYNP  L ST   R+DL+E
Sbjct:   90 MLADDMACNARNTYPAQVFNNENHQLNLYGDNVEVDYRGYEVTVENFLRVLTGRHDSAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADVVKQMKEKNRFKELLIMVDTCQAATLFSQLNSPGVLAIGSSMKGENSYSHHLDSDIGVSVVDRFTFYTLTFFEK-------------LNMYSNASLNSLFASYNPTLLMSTAYYRTDLYE 297          
BLAST of EWM24614.1 vs. NCBI_GenBank
Match: gi|698814800|ref|XP_009840429.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574104455|gb|ETV69986.1| hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 218.009 bits (554), Expect = 2.276e-65
Identity = 104/220 (47.27%), Postives = 141/220 (64.09%), Query Frame = 0
Query:    1 MLADDIPCNARNARPGGVYHSTTHTIDLCANGLEVDYKNEEVTVENFVRVLTGRHPPGWPISKRLGSGNTSRVFIYMTGHGGDEFLKFHNHEEISSEDLAHTLQDMKTAGRYQDLFFVVDTCQGGTLFRRFRTPGVLAVGSSGQGENSFAHQNDMVLGVALVDRFTDASCQYLHKLADRATAPQLSSPLGLLSQVPLSMLLGSYNPVQLKSTPVLRSDLF 220
            MLAD +PCNARN  PG V+ S THT +L  + +EVDY+  EVTV NF++VLTGRH PG P S+RL S   S VF++MTGHGGD FLKF + EE+SS D+A  +Q+M   GRY +LF++VDTCQ G+L  +  +P V+ +GS+  GENS+A+  D  +G++L+DRFT A+  Y+  +      P             L  L  SY+P  L S P  R++L 
Sbjct:    1 MLADQMPCNARNCFPGKVFDSNTHTTNLYGDDVEVDYRGAEVTVANFIKVLTGRHEPGTPASRRLDSDEDSNVFVFMTGHGGDGFLKFQDAEELSSHDIAQAVQEMHVKGRYNELFYMVDTCQAGSLATQLYSPNVVTIGSARTGENSYAYHTDFEVGLSLIDRFTYATLDYMQSMQGHKDKP-----------TTLGHLFDSYDPQMLYSNPDSRTELL 209          
BLAST of EWM24614.1 vs. NCBI_GenBank
Match: gi|1147594228|ref|XP_020100998.1| (putative GPI-anchor transamidase [Ananas comosus])

HSP 1 Score: 220.705 bits (561), Expect = 3.841e-65
Identity = 107/221 (48.42%), Postives = 142/221 (64.25%), Query Frame = 0
Query:    1 MLADDIPCNARNARPGGVYHSTTHTIDLCANGLEVDYKNEEVTVENFVRVLTGRHPPGWPISKRLGSGNTSRVFIYMTGHGGDEFLKFHNHEEISSEDLAHTLQDMKTAGRYQDLFFVVDTCQGGTLFRRFRTPGVLAVGSSGQGENSFAHQNDMVLGVALVDRFTDASCQYLHKLADRATAPQLSSPLGLLSQVPLSMLLGSYNPVQLKSTPVLRSDLFE 221
            MLADD+ CNARN  P  V+++  H ++L  + +EVDY+  EVTVENF+RVLTGRH    P SKRL S   S + +YMTGHGGDEFLKF + EE+ S DLA  ++ MK   R+++L  +VDTCQ  TLF +  +PGVLA+GSS +GENS++H  D  +GV++VDRFT  +  +  K             L + S   L+ L  SYNP  L ST   R+DL+E
Sbjct:   90 MLADDMACNARNTYPAQVFNNENHQLNLYGDNVEVDYRGYEVTVENFLRVLTGRHDSAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADVVKQMKEKNRFKELLIMVDTCQAATLFSQLNSPGVLAIGSSMKGENSYSHHLDSDIGVSVVDRFTFYTLTFFEK-------------LNMYSNASLNSLFASYNPTLLMSTAYYRTDLYE 297          
BLAST of EWM24614.1 vs. NCBI_GenBank
Match: gi|752355274|gb|KIO14319.1| (hypothetical protein M404DRAFT_992592 [Pisolithus tinctorius Marx 270])

HSP 1 Score: 220.32 bits (560), Expect = 4.492e-65
Identity = 117/328 (35.67%), Postives = 181/328 (55.18%), Query Frame = 0
Query:    1 MLADDIPCNARNARPGGVYHSTTHTIDLCANGLEVDYKNEEVTVENFVRVLTGRHPPGWPISKRLGSGNTSRVFIYMTGHGGDEFLKFHNHEEISSEDLAHTLQDMKTAGRYQDLFFVVDTCQGGTLFRRFRTPGVLAVGSSGQGENSFAHQNDMVLGVALVDRFTDASCQYLHKLADRATAPQLSSPLGLLSQVPLSMLLGSYNPVQLKSTPVLRSDLFEFEASREDEAEEVGDLGNHRGAATGTDSRLAQTAVTHFFGQEERLRVVSILEAAKDEEIESVGSRNTCSRTVEAIPVRLSQAHIDTLSTSPANHFEASYDRNSIMLSL 328
            MLADD+ CNARN  PG VY  +   +DL    +EVDY+  EVTVENF+R+LTGR  P  P SKRL + + S +F+YMTGHGG+EFLKF ++EEIS+ D+A   + M    RY ++FF++DTCQ  T++ +F +P +LA GSS  GENS++H+ND  +GV+++D +T    +Y+  +                SQV +  L  SY+PV+++S P +RSDLF+                            L    VT FFG   +  +  ++E   D  ++ +   +   + V + PV     H   +  + +N    + +++++ML +
Sbjct:   87 MLADDVACNARNKFPGSVYAKSGRHLDLYGENIEVDYRGYEVTVENFIRLLTGRVDPSVPRSKRLLTDDRSNIFVYMTGHGGNEFLKFQDNEEISAFDIADAFEQMWQKKRYNEIFFMIDTCQANTMYSQFYSPNILATGSSEIGENSYSHENDNDVGVSVIDSYTHFVLEYMEGINKT-------------SQVSMQDLFSSYDPVKIRSHPGVRSDLFQ--------------------------RPLEGALVTDFFGGVSQAEIFPVIEEDADTTLQYITRVSFPDQVVHSDPVSPQAYHDQGVDMTKSNAPALTPEKDNMMLDV 375          
BLAST of EWM24614.1 vs. NCBI_GenBank
Match: gi|1173142566|ref|XP_020520222.1| (GPI-anchor transamidase isoform X2 [Amborella trichopoda])

HSP 1 Score: 218.009 bits (554), Expect = 6.600e-65
Identity = 106/221 (47.96%), Postives = 142/221 (64.25%), Query Frame = 0
Query:    1 MLADDIPCNARNARPGGVYHSTTHTIDLCANGLEVDYKNEEVTVENFVRVLTGRHPPGWPISKRLGSGNTSRVFIYMTGHGGDEFLKFHNHEEISSEDLAHTLQDMKTAGRYQDLFFVVDTCQGGTLFRRFRTPGVLAVGSSGQGENSFAHQNDMVLGVALVDRFTDASCQYLHKLADRATAPQLSSPLGLLSQVPLSMLLGSYNPVQLKSTPVLRSDLFE 221
            MLADD+ CN RN+ P  V+++  H ++L  + +EVDY+  EVTVENF+RVLTGRH    P SKRL S   S + +YMTGHGGDEFLKF + EEI S+DLA  ++ M+  GR+++L  +VDTCQ  TLF R  +PGVLA+GSS +GENS++H  D  +GV++VDRFT  +  +  +             L +     LS L  SYNP  L ST   R DL++
Sbjct:   24 MLADDMACNTRNSYPAQVFNNENHQLNLYGDNVEVDYRGYEVTVENFLRVLTGRHETAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEEIQSQDLADAIEQMREKGRFKELLIMVDTCQAATLFSRLYSPGVLAIGSSLKGENSYSHHLDSDVGVSVVDRFTFYTLAFFER-------------LNMYDNASLSSLFNSYNPNLLMSTAYYRMDLYK 231          
BLAST of EWM24614.1 vs. NCBI_GenBank
Match: gi|548841185|gb|ERN01248.1| (hypothetical protein AMTR_s00002p00244630 [Amborella trichopoda])

HSP 1 Score: 218.009 bits (554), Expect = 8.367e-65
Identity = 106/221 (47.96%), Postives = 142/221 (64.25%), Query Frame = 0
Query:    1 MLADDIPCNARNARPGGVYHSTTHTIDLCANGLEVDYKNEEVTVENFVRVLTGRHPPGWPISKRLGSGNTSRVFIYMTGHGGDEFLKFHNHEEISSEDLAHTLQDMKTAGRYQDLFFVVDTCQGGTLFRRFRTPGVLAVGSSGQGENSFAHQNDMVLGVALVDRFTDASCQYLHKLADRATAPQLSSPLGLLSQVPLSMLLGSYNPVQLKSTPVLRSDLFE 221
            MLADD+ CN RN+ P  V+++  H ++L  + +EVDY+  EVTVENF+RVLTGRH    P SKRL S   S + +YMTGHGGDEFLKF + EEI S+DLA  ++ M+  GR+++L  +VDTCQ  TLF R  +PGVLA+GSS +GENS++H  D  +GV++VDRFT  +  +  +             L +     LS L  SYNP  L ST   R DL++
Sbjct:   32 MLADDMACNTRNSYPAQVFNNENHQLNLYGDNVEVDYRGYEVTVENFLRVLTGRHETAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEEIQSQDLADAIEQMREKGRFKELLIMVDTCQAATLFSRLYSPGVLAIGSSLKGENSYSHHLDSDVGVSVVDRFTFYTLAFFER-------------LNMYDNASLSSLFNSYNPNLLMSTAYYRMDLYK 239          
The following BLAST results are available for this feature:
BLAST of EWM24614.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106131|gb|EWM24614.1|0.000e+0100.00peptidase c13-like protein [Nannochloropsis gadita... [more]
gi|585106130|gb|EWM24613.1|0.000e+0100.00peptidase c13-like protein [Nannochloropsis gadita... [more]
gi|667482531|gb|AIG55841.1|4.051e-6646.49secreted protein [Achlya hypogyna] >gi|1173945761|... [more]
gi|761926662|gb|KIY47881.1|1.133e-6546.82hypothetical protein FISHEDRAFT_17449, partial [Fi... [more]
gi|1035965163|gb|OAY85470.1|1.272e-6548.42putative GPI-anchor transamidase [Ananas comosus][more]
gi|698814800|ref|XP_009840429.1|2.276e-6547.27hypothetical protein, variant [Aphanomyces astaci]... [more]
gi|1147594228|ref|XP_020100998.1|3.841e-6548.42putative GPI-anchor transamidase [Ananas comosus][more]
gi|752355274|gb|KIO14319.1|4.492e-6535.67hypothetical protein M404DRAFT_992592 [Pisolithus ... [more]
gi|1173142566|ref|XP_020520222.1|6.600e-6547.96GPI-anchor transamidase isoform X2 [Amborella tric... [more]
gi|548841185|gb|ERN01248.1|8.367e-6547.96hypothetical protein AMTR_s00002p00244630 [Amborel... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6081rna6081Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications