EWM24609.1, cds6064 (CDS) Nannochloropsis gaditana

Overview
NameEWM24609.1
Unique Namecds6064
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:524594..526318 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24609.1
ProductChaperonin Cpn60/TCP-1
Orig transcript idgnl|cribi|Naga_100171g8.2667.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:524594..526318 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0042026protein refolding
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR002423Cpn60/TCP-1
IPR027413GROEL-like_equatorial
IPR027409GroEL-like_apical_dom
IPR001844Chaprnin_Cpn60
Homology
BLAST of EWM24609.1 vs. NCBI_GenBank
Match: gi|585106126|gb|EWM24609.1| (Chaperonin Cpn60/TCP-1 [Nannochloropsis gaditana])

HSP 1 Score: 1144.03 bits (2958), Expect = 0.000e+0
Identity = 574/574 (100.00%), Postives = 574/574 (100.00%), Query Frame = 0
Query:    1 MITSLLSSPLLRHGFLPLTSPGGKDVRFGVDGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDVAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVGVLNQISRAVTSKAEVSQVGTISANGEKVIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQTAELENPYILLVEKKITSIQSLIPLLEMVVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENTTEDMLGTSKKVTVSKDDTLILHGNGARDAIDERCLLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGASEVEVNEKKDRVVDALNATRAAVEQGIVPGGGLALLWASKQLEDVKAKVSNMDQRIGVEIIEKALIAPVKSIANNAGVEGAVVVGELMKKDKPELGYNAQTGEYVDMFEAGIIDPTKVVRTALVDAQSVAALMITTEAMVADLPKDEGDAPAMPGMGGMGGMGGMGGMGF 574
            MITSLLSSPLLRHGFLPLTSPGGKDVRFGVDGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDVAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVGVLNQISRAVTSKAEVSQVGTISANGEKVIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQTAELENPYILLVEKKITSIQSLIPLLEMVVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENTTEDMLGTSKKVTVSKDDTLILHGNGARDAIDERCLLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGASEVEVNEKKDRVVDALNATRAAVEQGIVPGGGLALLWASKQLEDVKAKVSNMDQRIGVEIIEKALIAPVKSIANNAGVEGAVVVGELMKKDKPELGYNAQTGEYVDMFEAGIIDPTKVVRTALVDAQSVAALMITTEAMVADLPKDEGDAPAMPGMGGMGGMGGMGGMGF
Sbjct:    1 MITSLLSSPLLRHGFLPLTSPGGKDVRFGVDGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDVAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVGVLNQISRAVTSKAEVSQVGTISANGEKVIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQTAELENPYILLVEKKITSIQSLIPLLEMVVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENTTEDMLGTSKKVTVSKDDTLILHGNGARDAIDERCLLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGASEVEVNEKKDRVVDALNATRAAVEQGIVPGGGLALLWASKQLEDVKAKVSNMDQRIGVEIIEKALIAPVKSIANNAGVEGAVVVGELMKKDKPELGYNAQTGEYVDMFEAGIIDPTKVVRTALVDAQSVAALMITTEAMVADLPKDEGDAPAMPGMGGMGGMGGMGGMGF 574          
BLAST of EWM24609.1 vs. NCBI_GenBank
Match: gi|585106125|gb|EWM24608.1| (Chaperonin Cpn60/TCP-1 [Nannochloropsis gaditana])

HSP 1 Score: 1099.35 bits (2842), Expect = 0.000e+0
Identity = 553/553 (100.00%), Postives = 553/553 (100.00%), Query Frame = 0
Query:   22 GGKDVRFGVDGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDVAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVGVLNQISRAVTSKAEVSQVGTISANGEKVIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQTAELENPYILLVEKKITSIQSLIPLLEMVVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENTTEDMLGTSKKVTVSKDDTLILHGNGARDAIDERCLLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGASEVEVNEKKDRVVDALNATRAAVEQGIVPGGGLALLWASKQLEDVKAKVSNMDQRIGVEIIEKALIAPVKSIANNAGVEGAVVVGELMKKDKPELGYNAQTGEYVDMFEAGIIDPTKVVRTALVDAQSVAALMITTEAMVADLPKDEGDAPAMPGMGGMGGMGGMGGMGF 574
            GGKDVRFGVDGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDVAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVGVLNQISRAVTSKAEVSQVGTISANGEKVIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQTAELENPYILLVEKKITSIQSLIPLLEMVVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENTTEDMLGTSKKVTVSKDDTLILHGNGARDAIDERCLLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGASEVEVNEKKDRVVDALNATRAAVEQGIVPGGGLALLWASKQLEDVKAKVSNMDQRIGVEIIEKALIAPVKSIANNAGVEGAVVVGELMKKDKPELGYNAQTGEYVDMFEAGIIDPTKVVRTALVDAQSVAALMITTEAMVADLPKDEGDAPAMPGMGGMGGMGGMGGMGF
Sbjct:   23 GGKDVRFGVDGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDVAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVGVLNQISRAVTSKAEVSQVGTISANGEKVIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQTAELENPYILLVEKKITSIQSLIPLLEMVVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENTTEDMLGTSKKVTVSKDDTLILHGNGARDAIDERCLLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGASEVEVNEKKDRVVDALNATRAAVEQGIVPGGGLALLWASKQLEDVKAKVSNMDQRIGVEIIEKALIAPVKSIANNAGVEGAVVVGELMKKDKPELGYNAQTGEYVDMFEAGIIDPTKVVRTALVDAQSVAALMITTEAMVADLPKDEGDAPAMPGMGGMGGMGGMGGMGF 575          
BLAST of EWM24609.1 vs. NCBI_GenBank
Match: gi|298706972|emb|CBJ29791.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 827.78 bits (2137), Expect = 0.000e+0
Identity = 410/534 (76.78%), Postives = 468/534 (87.64%), Query Frame = 0
Query:   23 GKDVRFGVDGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDVAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVGVLNQISRAVTSKAEVSQVGTISANGEKVIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQTAELENPYILLVEKKITSIQSLIPLLEMVVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENTTEDMLGTSKKVTVSKDDTLILHGNGARDAIDERCLLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGASEVEVNEKKDRVVDALNATRAAVEQGIVPGGGLALLWASKQLEDVKAKVSNMDQRIGVEIIEKALIAPVKSIANNAGVEGAVVVGELMKKDKPELGYNAQTGEYVDMFEAGIIDPTKVVRTALVDAQSVAALMITTEAMVADLPKDEGDAPA 556
            GKDV+FGV+GRA ML GVD LADAVQVT+GPKGR+AI++Q +G P+ITKDGVTVAKSIEFK++F NMGA LVRQVASKTND AGDGTT+ATVLTRAIF EGCKAVAAG+NPMDLR+G +LA DHVV VL+ IS+ +++K EV+QVGTISAN E  IGDL+A AMERVG EGVITVQDGKTL NE+EVVEGMKFDRGYISPYF+TDNKTQ  E+ENP IL+VE+K+++I S+IPLLE  VKSQRPLLI+AEDV+SEALATLVVNKLRAGIKV AVKAPGFGDNRKATLQD+AVLTGGQVISE++GLK+E+ T D  GT K V VSKDD++IL G GARD I+ERC LL++SIA   SDYEKEKL+ERLAKL  GVAVIKVGG+SEVEV EKKDR VDALNATRAAV +GIVPGGG ALLWAS+QLE  KA  +NMDQ+IGVEIIEKAL  PV +IA NAGVEGAVVVGEL+K + P+ G+NA TGEY DM +AGIIDPTKVVRTALVDAQSVAAL++T EAMV DLP++E  APA
Sbjct:   25 GKDVKFGVEGRALMLQGVDMLADAVQVTMGPKGRSAILEQTYGVPRITKDGVTVAKSIEFKDKFHNMGAQLVRQVASKTNDAAGDGTTSATVLTRAIFREGCKAVAAGMNPMDLRKGIKLATDHVVNVLSDISKPISTKEEVAQVGTISANSETEIGDLIASAMERVGNEGVITVQDGKTLDNEIEVVEGMKFDRGYISPYFVTDNKTQMCEMENPLILIVERKVSTISSIIPLLEATVKSQRPLLIVAEDVDSEALATLVVNKLRAGIKVCAVKAPGFGDNRKATLQDLAVLTGGQVISEEVGLKLEDATPDHCGTCKLVKVSKDDSIILDGAGARDGIEERCSLLRESIARVKSDYEKEKLEERLAKLHSGVAVIKVGGSSEVEVGEKKDRFVDALNATRAAVSEGIVPGGGSALLWASRQLEATKASCANMDQKIGVEIIEKALRMPVHTIAMNAGVEGAVVVGELLKTEDPQWGHNAATGEYCDMIQAGIIDPTKVVRTALVDAQSVAALLMTAEAMVTDLPEEE--APA 556          
BLAST of EWM24609.1 vs. NCBI_GenBank
Match: gi|669137758|ref|XP_008604447.1| (chaperonin GroL [Saprolegnia diclina VS20] >gi|813126011|ref|XP_012196892.1| chaperonin GroL [Saprolegnia parasitica CBS 223.65] >gi|530743636|gb|EQC41878.1| chaperonin GroL [Saprolegnia diclina VS20] >gi|641538610|gb|KDO32441.1| chaperonin GroL [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 809.675 bits (2090), Expect = 0.000e+0
Identity = 392/534 (73.41%), Postives = 465/534 (87.08%), Query Frame = 0
Query:   23 GKDVRFGVDGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDVAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVGVLNQISRAVTSKAEVSQVGTISANGEKVIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQTAELENPYILLVEKKITSIQSLIPLLEMVVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENTTEDMLGTSKKVTVSKDDTLILHGNGARDAIDERCLLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGASEVEVNEKKDRVVDALNATRAAVEQGIVPGGGLALLWASKQLEDVKAKVSNMDQRIGVEIIEKALIAPVKSIANNAGVEGAVVVGELMKKDKPELGYNAQTGEYVDMFEAGIIDPTKVVRTALVDAQSVAALMITTEAMVADLPKDEGDAPA 556
            GKD+RFGV+GRA ML G D+LADAVQVTLGPKGRN +IDQ +GAPKITKDGVTVAK+IEFK++F NMGA L+RQVA+ TND AGDGTT+ATVLTRAI+SEGCK+VAAG+NP DLRRG Q+AVD VV  L  +S+ +  K +V+QV TISAN EK IGDL++DAMERVG+EGVITVQDGKTL+NELEVVEGMKFDRGYISPYF+T+ KTQ  ELENPYILLVEKK++S  ++ PLLE V K  RPLLIIAEDVESEALA L++N++RAGIKV AVKAPGFGDNRKA LQD+AVLTG +V+SED+G++++N T D+LG +KK+T++KDDTLILHG G+++AI+ERCLLLKDSIA+T SDYEKEKLQERLAKL GG+AVIKVGGASEVEV EKKDRVVDALNATRAAVE+GIVPGGG ALLW+S++L  +  K +NMDQ++GV+IIE+A  A V  IA NAG EGAV+VG+L+++  P  G+NAQT EYVDM EAGIIDPTKVVRT LVDA SVA+LM+T EA++ADLP  EG APA
Sbjct:   18 GKDIRFGVEGRALMLKGADQLADAVQVTLGPKGRNVVIDQAYGAPKITKDGVTVAKNIEFKDKFENMGAQLLRQVANNTNDAAGDGTTSATVLTRAIYSEGCKSVAAGMNPQDLRRGIQMAVDFVVAELATLSQDIDDKEKVAQVATISANSEKEIGDLISDAMERVGREGVITVQDGKTLYNELEVVEGMKFDRGYISPYFVTNTKTQACELENPYILLVEKKVSSAAAIAPLLEFVYKQSRPLLIIAEDVESEALAALILNRIRAGIKVCAVKAPGFGDNRKAGLQDMAVLTGAKVVSEDVGIRLDNATPDLLGCAKKITITKDDTLILHGEGSKEAIEERCLLLKDSIASTTSDYEKEKLQERLAKLGGGIAVIKVGGASEVEVGEKKDRVVDALNATRAAVEEGIVPGGGTALLWSSRKLPSLYEKCANMDQKVGVQIIERACRATVTQIAKNAGEEGAVIVGKLLEQSSPTFGFNAQTSEYVDMVEAGIIDPTKVVRTGLVDASSVASLMMTAEALIADLPA-EGGAPA 550          
BLAST of EWM24609.1 vs. NCBI_GenBank
Match: gi|698819759|ref|XP_009842908.1| (chaperonin GroL [Aphanomyces astaci] >gi|574102095|gb|ETV67651.1| chaperonin GroL [Aphanomyces astaci])

HSP 1 Score: 807.749 bits (2085), Expect = 0.000e+0
Identity = 394/534 (73.78%), Postives = 467/534 (87.45%), Query Frame = 0
Query:   23 GKDVRFGVDGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDVAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVGVLNQISRAVTSKAEVSQVGTISANGEKVIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQTAELENPYILLVEKKITSIQSLIPLLEMVVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENTTEDMLGTSKKVTVSKDDTLILHGNGARDAIDERCLLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGASEVEVNEKKDRVVDALNATRAAVEQGIVPGGGLALLWASKQLEDVKAKVSNMDQRIGVEIIEKALIAPVKSIANNAGVEGAVVVGELMKKDKPELGYNAQTGEYVDMFEAGIIDPTKVVRTALVDAQSVAALMITTEAMVADLPKDEGDAPA 556
            GKD+RFGV+GRA ML G D+LADAVQVTLGPKGRN +IDQ +GAPKITKDGVTVAK+IEF+++F NMGA L+RQVA+ TND AGDGTT+ATVLTRAI+SEGCK+VAAG+NP DLRRG QLAVDHVV  L ++S+ +  K +V+QV TISAN EK IGDL++DAMERVG+EGVITVQDGKTL+NELEVVEGMKFDRGYISPYF+T++KTQ+ ELENPYILLVEKK++S Q + P+LE V K+QRPLLIIAEDVESEALA L++N++RAGIKV AVKAPGFGDNRKA LQD+AVLTG +VISED+GL+++N T D+LGT+KKVT++KDDTLIL G G +DAI ER  LLKDSIA + SDYEKEKLQERLAKL GG+AVIKVGGASEVEV EKKDRVVDALNATRAAVE+GIVPGGG ALLWAS+ L+ +   V+NMDQ++G++IIE+A  + V  IA NAG EGAV+VG+L+++  P  G+NAQTGEYVDM EAGIIDPTKVVRT LVDA SVA+LM+T EA++ADLP  E +APA
Sbjct:   22 GKDIRFGVEGRALMLKGADQLADAVQVTLGPKGRNVVIDQAYGAPKITKDGVTVAKNIEFRDKFENMGAQLLRQVANNTNDAAGDGTTSATVLTRAIYSEGCKSVAAGMNPQDLRRGIQLAVDHVVAELAKLSQDIDDKEKVAQVATISANSEKEIGDLISDAMERVGREGVITVQDGKTLYNELEVVEGMKFDRGYISPYFVTNSKTQSCELENPYILLVEKKVSSAQGIAPMLEFVYKAQRPLLIIAEDVESEALAALILNRIRAGIKVCAVKAPGFGDNRKAGLQDMAVLTGAKVISEDVGLRLDNATPDILGTAKKVTITKDDTLILDGEGPKDAIAERVELLKDSIAGSTSDYEKEKLQERLAKLGGGIAVIKVGGASEVEVGEKKDRVVDALNATRAAVEEGIVPGGGSALLWASRNLKSLYGNVANMDQKVGIQIIERACRSTVTQIAKNAGEEGAVIVGKLLEQSSPTFGFNAQTGEYVDMVEAGIIDPTKVVRTGLVDASSVASLMMTAEALIADLP--EENAPA 553          
BLAST of EWM24609.1 vs. NCBI_GenBank
Match: gi|673016240|ref|XP_008862081.1| (chaperonin GroL [Aphanomyces invadans] >gi|574481284|gb|ETW08276.1| chaperonin GroL [Aphanomyces invadans])

HSP 1 Score: 806.979 bits (2083), Expect = 0.000e+0
Identity = 394/534 (73.78%), Postives = 467/534 (87.45%), Query Frame = 0
Query:   23 GKDVRFGVDGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDVAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVGVLNQISRAVTSKAEVSQVGTISANGEKVIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQTAELENPYILLVEKKITSIQSLIPLLEMVVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENTTEDMLGTSKKVTVSKDDTLILHGNGARDAIDERCLLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGASEVEVNEKKDRVVDALNATRAAVEQGIVPGGGLALLWASKQLEDVKAKVSNMDQRIGVEIIEKALIAPVKSIANNAGVEGAVVVGELMKKDKPELGYNAQTGEYVDMFEAGIIDPTKVVRTALVDAQSVAALMITTEAMVADLPKDEGDAPA 556
            GKD+RFGV+GRA ML G D+LADAVQVTLGPKGRN +IDQ +GAPKITKDGVTVAK+IEF+++F NMGA L+RQVA+ TND AGDGTT+ATVLTRAI+SEGCK+VAAG+NP DLRRG QLAVDHVV  L ++S+ +  K +V+QV TISAN EK IGDL++DAMERVG+EGVITVQDGKTL+NELEVVEGMKFDRGYISPYF+T++K Q  ELENPYILLVEKK++S Q + P+LE V K+QRPLLIIAEDVESEALA L++N++RAGIKV AVKAPGFGDNRKA LQD+AVLTG +VISED+GL+++N T D+LGT+KKVT++KDDTLIL G GA+DAI ER  LLKDSIA + SDYEKEKLQERLAKL GG+AVIKVGGASEVEV EKKDRVVDALNATRAAVE+GIVPGGG ALLWAS+ L+ +   V+NMDQ++G++IIE+A  + V  IA NAG EGAV+VG+L+++D P  G+NAQTG+YVDM EAGIIDPTKVVRT LVDA SVA+LM+T EA++ADLP  E +APA
Sbjct:   22 GKDIRFGVEGRALMLKGADQLADAVQVTLGPKGRNVVIDQAYGAPKITKDGVTVAKNIEFRDKFENMGAQLLRQVANNTNDAAGDGTTSATVLTRAIYSEGCKSVAAGMNPQDLRRGIQLAVDHVVSELAKLSQDIDDKEKVAQVATISANSEKEIGDLISDAMERVGREGVITVQDGKTLYNELEVVEGMKFDRGYISPYFVTNSKNQACELENPYILLVEKKVSSAQGIAPMLEFVYKAQRPLLIIAEDVESEALAALILNRIRAGIKVCAVKAPGFGDNRKAGLQDMAVLTGAKVISEDVGLRLDNATPDILGTAKKVTITKDDTLILDGEGAKDAIAERVELLKDSIAQSTSDYEKEKLQERLAKLGGGIAVIKVGGASEVEVGEKKDRVVDALNATRAAVEEGIVPGGGTALLWASRNLKSLYDGVANMDQKVGIQIIERACRSTVTQIAKNAGEEGAVIVGKLLEQDSPTFGFNAQTGQYVDMVEAGIIDPTKVVRTGLVDASSVASLMMTAEALIADLP--EENAPA 553          
BLAST of EWM24609.1 vs. NCBI_GenBank
Match: gi|673016236|ref|XP_008862079.1| (chaperonin GroL [Aphanomyces invadans] >gi|574481282|gb|ETW08274.1| chaperonin GroL [Aphanomyces invadans])

HSP 1 Score: 805.823 bits (2080), Expect = 0.000e+0
Identity = 394/534 (73.78%), Postives = 467/534 (87.45%), Query Frame = 0
Query:   23 GKDVRFGVDGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDVAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVGVLNQISRAVTSKAEVSQVGTISANGEKVIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQTAELENPYILLVEKKITSIQSLIPLLEMVVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENTTEDMLGTSKKVTVSKDDTLILHGNGARDAIDERCLLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGASEVEVNEKKDRVVDALNATRAAVEQGIVPGGGLALLWASKQLEDVKAKVSNMDQRIGVEIIEKALIAPVKSIANNAGVEGAVVVGELMKKDKPELGYNAQTGEYVDMFEAGIIDPTKVVRTALVDAQSVAALMITTEAMVADLPKDEGDAPA 556
            GKD+RFGV+GRA ML G D+LADAVQVTLGPKGRN +IDQ +GAPKITKDGVTVAK+IEF+++F NMGA L+RQVA+ TND AGDGTT+ATVLTRAI+SEGCK+VAAG+NP DLRRG QLAVDHVV  L ++S+ +  K +V+QV TISAN EK IGDL++DAMERVG+EGVITVQDGKTL+NELEVVEGMKFDRGYISPYF+T++K Q  ELENPYILLVEKK++S Q + P+LE V K+QRPLLIIAEDVESEALA L++N++RAGIKV AVKAPGFGDNRKA LQD+AVLTG +VISED+GL+++N T D+LGT+KKVT++KDDTLIL G GA+DAI ER  LLKDSIA + SDYEKEKLQERLAKL GG+AVIKVGGASEVEV EKKDRVVDALNATRAAVE+GIVPGGG ALLWAS+ L+ +   V+NMDQ++G++IIE+A  + V  IA NAG EGAV+VG+L+++D P  G+NAQTG+YVDM EAGIIDPTKVVRT LVDA SVA+LM+T EA++ADLP  E +APA
Sbjct:   41 GKDIRFGVEGRALMLKGADQLADAVQVTLGPKGRNVVIDQAYGAPKITKDGVTVAKNIEFRDKFENMGAQLLRQVANNTNDAAGDGTTSATVLTRAIYSEGCKSVAAGMNPQDLRRGIQLAVDHVVSELAKLSQDIDDKEKVAQVATISANSEKEIGDLISDAMERVGREGVITVQDGKTLYNELEVVEGMKFDRGYISPYFVTNSKNQACELENPYILLVEKKVSSAQGIAPMLEFVYKAQRPLLIIAEDVESEALAALILNRIRAGIKVCAVKAPGFGDNRKAGLQDMAVLTGAKVISEDVGLRLDNATPDILGTAKKVTITKDDTLILDGEGAKDAIAERVELLKDSIAQSTSDYEKEKLQERLAKLGGGIAVIKVGGASEVEVGEKKDRVVDALNATRAAVEEGIVPGGGTALLWASRNLKSLYDGVANMDQKVGIQIIERACRSTVTQIAKNAGEEGAVIVGKLLEQDSPTFGFNAQTGQYVDMVEAGIIDPTKVVRTGLVDASSVASLMMTAEALIADLP--EENAPA 572          
BLAST of EWM24609.1 vs. NCBI_GenBank
Match: gi|1173946073|gb|OQR94639.1| (chaperonin CPN60-1, mitochondrial precursor [Achlya hypogyna])

HSP 1 Score: 799.66 bits (2064), Expect = 0.000e+0
Identity = 384/526 (73.00%), Postives = 461/526 (87.64%), Query Frame = 0
Query:   23 GKDVRFGVDGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDVAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVGVLNQISRAVTSKAEVSQVGTISANGEKVIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQTAELENPYILLVEKKITSIQSLIPLLEMVVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENTTEDMLGTSKKVTVSKDDTLILHGNGARDAIDERCLLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGASEVEVNEKKDRVVDALNATRAAVEQGIVPGGGLALLWASKQLEDVKAKVSNMDQRIGVEIIEKALIAPVKSIANNAGVEGAVVVGELMKKDKPELGYNAQTGEYVDMFEAGIIDPTKVVRTALVDAQSVAALMITTEAMVADLP 548
            GK++RFGV+GRA ML G D+LADAVQVTLGPKGRN +IDQ +GAPKITKDGVTVAK+IEFK++F NMGA L+RQVA+ TND AGDGTT+ATVLTRAI+SEGCK+VAAG+NP DLRRG Q+AVDHVVG L ++S+ +  K +V+QV TISAN EK IGDL++DAMERVG+EGVITVQDGKTL+NELEVVEGMKFDRGYISPYF+T++KTQ  EL+NPYILLVEKK++S  S+ PLLE V K  RPLLIIAED+ESEALA L++N++RAGIKV AVKAPGFGDNRKA LQD+AVLTG +V+SED+G++++N T D+LG +KK+TV+KDDTLIL G G+++AI+ERCLLLKDSIA+T SDYEKEKLQERLAKL GG+AVIKVGGASEVEV EKKDRVVDALNATRAAVE+GIVPGGG ALLW+S+ L  +  K  NMDQ++GV+IIE+A  A V  IA NAG EGAV+VG+L+++  P  G+NAQT ++VDM +AGIIDPTKVVRT LVDA SVA+LM+T EA++ADLP
Sbjct:   18 GKEIRFGVEGRALMLKGADQLADAVQVTLGPKGRNVVIDQAYGAPKITKDGVTVAKNIEFKDKFENMGAQLLRQVANNTNDAAGDGTTSATVLTRAIYSEGCKSVAAGMNPQDLRRGIQMAVDHVVGELAKLSQDIDDKEKVAQVATISANSEKEIGDLISDAMERVGREGVITVQDGKTLYNELEVVEGMKFDRGYISPYFVTNSKTQACELDNPYILLVEKKVSSAASIAPLLEFVYKQSRPLLIIAEDIESEALAALILNRIRAGIKVCAVKAPGFGDNRKAGLQDMAVLTGAKVVSEDVGIRLDNATPDLLGCAKKITVTKDDTLILDGEGSKEAIEERCLLLKDSIASTTSDYEKEKLQERLAKLGGGIAVIKVGGASEVEVGEKKDRVVDALNATRAAVEEGIVPGGGTALLWSSRTLPSLYEKCVNMDQKVGVQIIERACRATVTQIAKNAGEEGAVIVGKLLEQTSPTFGFNAQTSQFVDMVDAGIIDPTKVVRTGLVDASSVASLMMTAEALIADLP 543          
BLAST of EWM24609.1 vs. NCBI_GenBank
Match: gi|1214702337|gb|OWZ14546.1| (Chaperonin GroL [Phytophthora megakarya])

HSP 1 Score: 798.505 bits (2061), Expect = 0.000e+0
Identity = 392/543 (72.19%), Postives = 463/543 (85.27%), Query Frame = 0
Query:    8 SPLLRHGFLPLTSPGGKDVRFGVDGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDVAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVGVLNQISRAVTSKAEVSQVGTISANGEKVIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQTAELENPYILLVEKKITSIQSLIPLLEMVVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENTTEDMLGTSKKVTVSKDDTLILHGNGARDAIDERCLLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGASEVEVNEKKDRVVDALNATRAAVEQGIVPGGGLALLWASKQLEDVKAKVSNMDQRIGVEIIEKALIAPVKSIANNAGVEGAVVVGELMKKDKPELGYNAQTGEYVDMFEAGIIDPTKVVRTALVDAQSVAALMITTEAMVADLPKD 550
            SP  R  F       GKD+RFGV+GRA ML G D+LA+AVQVT+GPKGRN +IDQ +GAPKITKDGVTVA+S++FK++F NMGA LVR VAS TND AGDGTT+ATVLTRAIFSEGCK+VAAG+NP DLRRG Q+AVDHVV  L ++S+ V  K +V+QV TISAN E  IG L++DAMERVGKEGVITVQDGKTL+NELEVVEGMKFDRG+ISPYF+TDNKTQ+ E+ENPYILLVEKK++S+QS+IP+LE VVK QRPLLIIAEDVESEALA LV+NK+R G+KV AVKAPGFGDNRKA+LQD+AVLTG  VISEDLG ++E  T DMLG++KKVT++KDDTL+L G G+ +A++ER  LL+ SI AT SDYEKEKLQERLAKLSGGVAVIKVGGASEVEV EKKDRVVDALNATRAAV +GIVPGGG ALLWAS+ L  +    +N+DQ++GVEIIE+A  AP   IA NAG EGAVVVG+L++ D  ELG+NAQTGEYV++ +AGIIDPTKVVRT LVDA SVA+LM+T EA++AD P++
Sbjct:   16 SPAGRRLF-----SSGKDIRFGVEGRAAMLKGADQLANAVQVTMGPKGRNVVIDQSYGAPKITKDGVTVARSVDFKDKFENMGAQLVRSVASSTNDAAGDGTTSATVLTRAIFSEGCKSVAAGMNPTDLRRGIQMAVDHVVDGLQKLSKDVADKEKVAQVATISANSETEIGSLISDAMERVGKEGVITVQDGKTLYNELEVVEGMKFDRGFISPYFVTDNKTQSCEMENPYILLVEKKVSSLQSIIPMLEAVVKEQRPLLIIAEDVESEALAALVINKIRGGVKVCAVKAPGFGDNRKASLQDMAVLTGATVISEDLGHRLETATPDMLGSAKKVTITKDDTLMLDGAGSAEAVEERGNLLRSSIDATTSDYEKEKLQERLAKLSGGVAVIKVGGASEVEVGEKKDRVVDALNATRAAVAEGIVPGGGAALLWASRSLNSLYDSCANLDQKVGVEIIERACRAPATQIAKNAGHEGAVVVGKLLESDSAELGFNAQTGEYVNLVDAGIIDPTKVVRTGLVDASSVASLMMTAEALIADHPEE 553          
BLAST of EWM24609.1 vs. NCBI_GenBank
Match: gi|695450044|ref|XP_009535382.1| (hypothetical protein PHYSODRAFT_549587 [Phytophthora sojae] >gi|348668926|gb|EGZ08749.1| hypothetical protein PHYSODRAFT_549587 [Phytophthora sojae])

HSP 1 Score: 796.964 bits (2057), Expect = 0.000e+0
Identity = 405/559 (72.45%), Postives = 476/559 (85.15%), Query Frame = 0
Query:    8 SPLLRHGFLPLTSPGGKDVRFGVDGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDVAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVGVLNQISRAVTSKAEVSQVGTISANGEKVIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQTAELENPYILLVEKKITSIQSLIPLLEMVVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENTTEDMLGTSKKVTVSKDDTLILHGNGARDAIDERCLLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGASEVEVNEKKDRVVDALNATRAAVEQGIVPGGGLALLWASKQLEDVKAKVSNMDQRIGVEIIEKALIAPVKSIANNAGVEGAVVVGELMKKDKPELGYNAQTGEYVDMFEAGIIDPTKVVRTALVDAQSVAALMITTEAMVADLPKDEGDAPAMPGMGGMGGM 566
            SP  R  F       GKD+RFGV+GRA ML G D+LA+AVQVTLGPKGRN +IDQ +GAPKITKDGVTVA+S++FK++F NMGA LVR VAS TND AGDGTT+ATVLTRAIFSEGCK+VAAG+NP DLRRG Q+AVDHVV  L ++S+ V  K +V+QV TISAN E  IG+L++DAMERVGKEGVITVQDGKTL+NELEVVEGMKFDRG+ISPYF+TDNKTQ+ E+ENPYILLVEKK++S+QS+IP+LE VVK QRPLLIIAEDVESEALA LV+NK+R G+KV AVKAPGFGDNRKATLQD+AVLTG  VISEDLG ++E  T DMLG++KKVTV+KDDTL+L G GA +A++ER  LL+ SI +T S+YEKEKLQERLAKLSGGVAVIKVGGASEVEV EKKDRVVDALNATRAAV +GIVPGGG ALLWAS+ L  +    +N+DQ++GVEI+E+A  AP   IA NAG EGAVVVG+L++ D+ E G+NAQTGEYV+M +AGIIDPTKVVRT LVDA SVA+LM+T EA++AD P++ G AP M GMGGMGGM
Sbjct:   16 SPAGRRLF-----SSGKDIRFGVEGRAAMLKGADQLANAVQVTLGPKGRNVVIDQSYGAPKITKDGVTVARSVDFKDKFENMGAQLVRSVASSTNDAAGDGTTSATVLTRAIFSEGCKSVAAGMNPTDLRRGIQMAVDHVVDGLQKLSQDVADKEKVAQVATISANSETEIGNLISDAMERVGKEGVITVQDGKTLYNELEVVEGMKFDRGFISPYFVTDNKTQSCEMENPYILLVEKKVSSLQSIIPMLETVVKQQRPLLIIAEDVESEALAALVINKIRGGVKVCAVKAPGFGDNRKATLQDMAVLTGATVISEDLGHRLETATPDMLGSAKKVTVTKDDTLLLDGAGAPEAVEERGNLLRASIESTTSEYEKEKLQERLAKLSGGVAVIKVGGASEVEVGEKKDRVVDALNATRAAVAEGIVPGGGAALLWASRTLNTLYDSCANLDQKVGVEIVERACRAPATQIAKNAGHEGAVVVGKLLENDQAEFGFNAQTGEYVNMVDAGIIDPTKVVRTGLVDASSVASLMMTAEALIADHPEEAGAAPPMGGMGGMGGM 569          
The following BLAST results are available for this feature:
BLAST of EWM24609.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106126|gb|EWM24609.1|0.000e+0100.00Chaperonin Cpn60/TCP-1 [Nannochloropsis gaditana][more]
gi|585106125|gb|EWM24608.1|0.000e+0100.00Chaperonin Cpn60/TCP-1 [Nannochloropsis gaditana][more]
gi|298706972|emb|CBJ29791.1|0.000e+076.78conserved unknown protein [Ectocarpus siliculosus][more]
gi|669137758|ref|XP_008604447.1|0.000e+073.41chaperonin GroL [Saprolegnia diclina VS20] >gi|813... [more]
gi|698819759|ref|XP_009842908.1|0.000e+073.78chaperonin GroL [Aphanomyces astaci] >gi|574102095... [more]
gi|673016240|ref|XP_008862081.1|0.000e+073.78chaperonin GroL [Aphanomyces invadans] >gi|5744812... [more]
gi|673016236|ref|XP_008862079.1|0.000e+073.78chaperonin GroL [Aphanomyces invadans] >gi|5744812... [more]
gi|1173946073|gb|OQR94639.1|0.000e+073.00chaperonin CPN60-1, mitochondrial precursor [Achly... [more]
gi|1214702337|gb|OWZ14546.1|0.000e+072.19Chaperonin GroL [Phytophthora megakarya][more]
gi|695450044|ref|XP_009535382.1|0.000e+072.45hypothetical protein PHYSODRAFT_549587 [Phytophtho... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6079rna6079Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications