EWM24607.1, cds6060 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24607.1 vs. NCBI_GenBank
Match: gi|585106124|gb|EWM24607.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 1374.76 bits (3557), Expect = 0.000e+0 Identity = 675/675 (100.00%), Postives = 675/675 (100.00%), Query Frame = 0 Query: 1 MVDSIDLGKLEANIVTDTDLETGDEETTTSTLHSAGLSQNLASSASVKPKDVKTENGRLIVDDRESVSTCARVVLEWNISKYEIKLKKRKSLTVLRSIAGRAENGSFNAVMGPSGCGKTSLLQCLALRTRDFEGSLTLNGKALTGAYFAHTGYVHQKELFFPHLTVREHLVFHALNHLSRHKSLEECIARVEAVMEEVDLTKVGDQKIGGGDLYLVAGISGGERKRLNIATELLGNPRILLLDEPTSGLDSVMGELVCLLLKSIAVQAPRRLVLAAIHTPSSRVFTLVSHVTLLTSHGELAYWGPRDKLLLFLEGLGYRCPSYFNPADFILELASAKVIAGQAGAPGGVGGQELASPGNVSGSLLVESTSSGKLVAACKSTLSRDLAPLGVNNRHKEVVGVQGPGASNWAVSFRTNLWRSWLSQRREYVGLAVAVLMNTALGLVFGVLYFQQIPHDNGRNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAFMIMGILPYFMVGLAPSAVAFGWYCLLFFIVNFAAQSIGYLASSFSANPVVGLSILPLFITPMILFSGMLYERNSVPPSLRWIQDISVMNYSFALMVLNQVGHIDGPARSFLIDFLQIKDSDFPGFLIALVSLSILYRVAAMGVLWVRVKFFSKVQ 675 MVDSIDLGKLEANIVTDTDLETGDEETTTSTLHSAGLSQNLASSASVKPKDVKTENGRLIVDDRESVSTCARVVLEWNISKYEIKLKKRKSLTVLRSIAGRAENGSFNAVMGPSGCGKTSLLQCLALRTRDFEGSLTLNGKALTGAYFAHTGYVHQKELFFPHLTVREHLVFHALNHLSRHKSLEECIARVEAVMEEVDLTKVGDQKIGGGDLYLVAGISGGERKRLNIATELLGNPRILLLDEPTSGLDSVMGELVCLLLKSIAVQAPRRLVLAAIHTPSSRVFTLVSHVTLLTSHGELAYWGPRDKLLLFLEGLGYRCPSYFNPADFILELASAKVIAGQAGAPGGVGGQELASPGNVSGSLLVESTSSGKLVAACKSTLSRDLAPLGVNNRHKEVVGVQGPGASNWAVSFRTNLWRSWLSQRREYVGLAVAVLMNTALGLVFGVLYFQQIPHDNGRNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAFMIMGILPYFMVGLAPSAVAFGWYCLLFFIVNFAAQSIGYLASSFSANPVVGLSILPLFITPMILFSGMLYERNSVPPSLRWIQDISVMNYSFALMVLNQVGHIDGPARSFLIDFLQIKDSDFPGFLIALVSLSILYRVAAMGVLWVRVKFFSKVQ Sbjct: 1 MVDSIDLGKLEANIVTDTDLETGDEETTTSTLHSAGLSQNLASSASVKPKDVKTENGRLIVDDRESVSTCARVVLEWNISKYEIKLKKRKSLTVLRSIAGRAENGSFNAVMGPSGCGKTSLLQCLALRTRDFEGSLTLNGKALTGAYFAHTGYVHQKELFFPHLTVREHLVFHALNHLSRHKSLEECIARVEAVMEEVDLTKVGDQKIGGGDLYLVAGISGGERKRLNIATELLGNPRILLLDEPTSGLDSVMGELVCLLLKSIAVQAPRRLVLAAIHTPSSRVFTLVSHVTLLTSHGELAYWGPRDKLLLFLEGLGYRCPSYFNPADFILELASAKVIAGQAGAPGGVGGQELASPGNVSGSLLVESTSSGKLVAACKSTLSRDLAPLGVNNRHKEVVGVQGPGASNWAVSFRTNLWRSWLSQRREYVGLAVAVLMNTALGLVFGVLYFQQIPHDNGRNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAFMIMGILPYFMVGLAPSAVAFGWYCLLFFIVNFAAQSIGYLASSFSANPVVGLSILPLFITPMILFSGMLYERNSVPPSLRWIQDISVMNYSFALMVLNQVGHIDGPARSFLIDFLQIKDSDFPGFLIALVSLSILYRVAAMGVLWVRVKFFSKVQ 675
BLAST of EWM24607.1 vs. NCBI_GenBank
Match: gi|585109183|gb|EWM27013.1| (white [Nannochloropsis gaditana]) HSP 1 Score: 486.108 bits (1250), Expect = 7.536e-161 Identity = 267/601 (44.43%), Postives = 374/601 (62.23%), Query Frame = 0 Query: 74 VLEWNISKYEIKLKKRKSLTVLRSIAGRAENGSFNAVMGPSGCGKTSLLQCLALRTRDFEGSLTLNGKALTGAYFAHTGYVHQKELFFPHLTVREHLVFHALNHLSRHKSLEECIARVEAVMEEVDLTKVGDQKIGGGDLYLVAGISGGERKRLNIATELLGNPRILLLDEPTSGLDSVMGELVCLLLKSIAV---QAPRRLVLAAIHTPSSRVFTLVSHVTLLTSHGELAYWGPRDKLLLFLEGLGYRCPSYFNPADFILELASAKVIAGQAGAPGGVGGQELASPGNVSGSLLVESTSSGKLVAACKSTLSRDLAPLGVNNRHKEVVGVQGPGASNWAVSFRTNLWRSWLSQRREYVGLAVAVLMNTALGLVFGVLYFQQIPHDNGRNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAFMIMGILPYFMVGLAPSAVAFGWYCLLFFIVNFAAQSIGYLASSFSANPVVGLSILPLFITPMILFSGMLYERNSVPPSLRWIQDISVMNYSFALMVLNQVGHI-DGPARSFLIDFLQIKDSDFPGFLIALVSLSILYRVAAMGVLWVRVKF 670 VL++N+S + K+ +L IAGR G F A+MGPSG GKT+L+ C+ALR R FEG++ ++G++ YF TGYVHQKELFF LT REHLVFHA+N L + ++C+ RV+ V+ EV+L + D IGGG+ LV G+SGGERKRL+I TELL +P+I+ LDEPTSGLDSVMGELV LL ++A PRR+++ IHTPSSR+++ SHV LL + G +AY G R+ L + + LGY P +NPADF LE+ SAK PG A + +VE+ + K + P N+ V G + + + + N+WR+ R+ L V M LG+VFG+L+ Q H + RN G +F+L+V +LI S+ V + FP +++I MREYY G N+ YF+GRT+A P F+++ I+PY+M GL S +F YC +FF++ + S GYLASSFSA+PV+GL+I P+ TPMILFSGMLYER+SVP L+WIQ+ISV+NY FA +V+N+ + DGP R ++ FLQI F + L L++ YR A+ VL +R+++ Sbjct: 51 VLDFNVSNFSTPKGKQ----ILHDIAGRTVTGEFTALMGPSGAGKTTLMDCIALRQRSFEGAIHVDGRSPKSDYFTQTGYVHQKELFFSSLTSREHLVFHAINRLGGKYTKDQCMKRVDEVINEVELARCADTIIGGGEFALVKGLSGGERKRLSIGTELLSHPKIIFLDEPTSGLDSVMGELVTNLLAALATGKNGGPRRVIMCVIHTPSSRMWSHFSHVLLLATGGFMAYHGTREALFPYFKSLGYDVPPNYNPADFALEVVSAK--------PG-------AEVQGKTAVWIVENFA--------KRMEKFNRLPPETNHHTFTGVATSGGTGAGYLLQTKMNIWRAVTQSSRDKGTLYALVGMLLILGMVFGLLFLNQ-AHSSWRNLMGMMFALVVAVLILCSMNVALKFPVEWSIFMREYYTGANALGPYFIGRTIADIPFLALFLLLVIVPYWMSGLTASFASFIRYCFIFFLIINGSASTGYLASSFSADPVLGLAITPVIDTPMILFSGMLYERSSVPLYLKWIQNISVVNYGFAALVINECNSLGDGPMRWLVLHFLQIDLGMFGACIGWLFGLALGYRFASFLVLKLRIRY 623
BLAST of EWM24607.1 vs. NCBI_GenBank
Match: gi|585106190|gb|EWM24668.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 397.897 bits (1021), Expect = 8.981e-128 Identity = 221/541 (40.85%), Postives = 331/541 (61.18%), Query Frame = 0 Query: 111 MGPSGCGKTSLLQCLALRTRDFEGSLTLNGKALTGAYFAHTGYVHQKELFFPHLTVREHLVFHALNHLSRHKSLEECIARVEAVMEEVDLTKVGDQKIGGGD-LYLVAGISGGERKRLNIATELLGNPRILLLDEPTSGLDSVMGELVCLLLKSIAVQAPRRLVLAAIHTPSSRVFTLVSHVTLLTSHGELAYWGPRDKLLLFLEGLGYRCPSYFNPADFILELASAKVIAGQAGAPGGVGGQELASPGNVSGSLLVESTSSGKLVAACKSTLSRDLAPLGVNNRHKEVVGVQGPGASNWAVSFRTNLWRSWLSQRREYVGLAVAVLMNTALGLVFGVLYFQQIPHDNGRNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAFMIMGILPYFMVGLAPSAVAFGWYCLLFFIVNFAAQSIGYLASSFSANPVVGLSILPLFITPMILFSGMLYERNSVPPSLRWIQDISVMNYSFALMVLNQVGHIDGPARSFLIDFLQIKDSDFPGFLIALV 650 MGPSG GKT+LL+C++LR R FEG++ + + TG +F + VHQKEL F +T REHL+FHA+ +S++ ++E+ ARVE V++EV L K D +GG D +Y+ G+SGGERKRL+IA ELL P+++ LDEP+SGLDSVM E + LK + R+V+A++H PSS + +HV LLT G LAY G +D + + L Y+CP +NP+DF L+L SA PG QE A +LVAA ++ PL + HK+ V G AS+W + F+ NLWR+++ +R++V + L++ +G +FG+LY+QQ N RN G LFS++V L SS+AV M FP D+AI++REY++G N+ Y + R + P ++ L Y+M G+ F + L F N+A+ S+G SSFSANP +GL+ILP F+ PMI+FSG+LYER+SVP L W+Q +S++NYSF+ +++ Q+ + P ++ F+++ + D G+ I ++ Sbjct: 1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSG--RIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSSLSYQCPENYNPSDFYLKLISA--------TPGADPAQEKAR--------------MNQLVAAYNASDMVRKTPLAPDETHKQFQMVFG-HASSWTL-FKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQ-ARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVEL-NPDTMGWDIGML 513
BLAST of EWM24607.1 vs. NCBI_GenBank
Match: gi|553189117|ref|XP_005854935.1| (atp-binding cassette [Nannochloropsis gaditana CCMP526] >gi|422294123|gb|EKU21423.1| atp-binding cassette [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 381.719 bits (979), Expect = 3.730e-120 Identity = 221/605 (36.53%), Postives = 337/605 (55.70%), Query Frame = 0 Query: 75 LEWNISKYEIKLKKRKS-------------LTVLRSIAGRAENGSFNAVMGPSGCGKTSLLQCLALRTRDFEGSLTLNGKALTGAYFAHTGYVHQKELFFPHLTVREHLVFHALNHLS--------------------------RHKSLEECIARVEAVMEEVDLTKVGDQKIGGGD-LYLVAGISGGERKRLNIATELLGNPRILLLDEPTSGLDSVMGELVCLLLKSIAVQAPRRLVLAAIHTPSSRVFTLVSHVTLLTSHGELAYWGPRDKLLLFLEG-LGYRCPSYFNPADFILELASAKVIAGQAGAPGGVGGQELASPGNVSGSLLVESTSSGKLVAACKSTLSRDLAPLGVNNRHKEVVGVQGPGASNWAVSFRTNLWRSWLSQRREYVGLAVAVLMNTALGLVFGVLYFQQIPHDNGRNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAFMIMGILPYFMVGLAPSAVAFGWYCLLFFIVNFAAQSIGYLASSFSANPVVGLSILPLFITPMILFSGMLYERNSVPPSLRWIQDISVMNYSFALMVLNQVGHIDGPARSFLIDFLQIK 638 LEW++ +++++++ ++ T+L+ +AG A +G A++GPSG GKT+LL+C++LR R+F+G + +G+A G +F + +VHQ ++ + LT REHL FHA+ +S S E RVE V+ V L K D IGG D ++ V GISGGERKRL IATELL I+ LDEP+SGLDSVM E + LK + Q R+V+A +H PSS+ + L S++ LLT G LAY GP + L + + LG CP ++NPADF+LEL SA+ GV QE E L A + + PL +++HK + V+G GAS+W V F+ NLWR L R+ + L + ++ +G +FGVLY+Q + N RN G +FS +V + + V M FP ++ +++RE+ +G N+ Y + R + P S ++M + Y+ G+ P A + + L+F N++ S+G SSFSANP+V ++I+P F+TPMI+FSG+L ER+SVP L WI+D+SV+NY+F ++ Q+ + G + F+Q Sbjct: 29 LEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQG--RIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAE---------PGVPLQE-------------ELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDW-VFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQ-LAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFN 607
BLAST of EWM24607.1 vs. NCBI_GenBank
Match: gi|585110259|gb|EWM27919.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 381.719 bits (979), Expect = 4.287e-120 Identity = 221/605 (36.53%), Postives = 337/605 (55.70%), Query Frame = 0 Query: 75 LEWNISKYEIKLKKRKS-------------LTVLRSIAGRAENGSFNAVMGPSGCGKTSLLQCLALRTRDFEGSLTLNGKALTGAYFAHTGYVHQKELFFPHLTVREHLVFHALNHLS--------------------------RHKSLEECIARVEAVMEEVDLTKVGDQKIGGGD-LYLVAGISGGERKRLNIATELLGNPRILLLDEPTSGLDSVMGELVCLLLKSIAVQAPRRLVLAAIHTPSSRVFTLVSHVTLLTSHGELAYWGPRDKLLLFLEG-LGYRCPSYFNPADFILELASAKVIAGQAGAPGGVGGQELASPGNVSGSLLVESTSSGKLVAACKSTLSRDLAPLGVNNRHKEVVGVQGPGASNWAVSFRTNLWRSWLSQRREYVGLAVAVLMNTALGLVFGVLYFQQIPHDNGRNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAFMIMGILPYFMVGLAPSAVAFGWYCLLFFIVNFAAQSIGYLASSFSANPVVGLSILPLFITPMILFSGMLYERNSVPPSLRWIQDISVMNYSFALMVLNQVGHIDGPARSFLIDFLQIK 638 LEW++ +++++++ ++ T+L+ +AG A +G A++GPSG GKT+LL+C++LR R+F+G + +G+A G +F + +VHQ ++ + LT REHL FHA+ +S S E RVE V+ V L K D IGG D ++ V GISGGERKRL IATELL I+ LDEP+SGLDSVM E + LK + Q R+V+A +H PSS+ + L S++ LLT G LAY GP + L + + LG CP ++NPADF+LEL SA+ GV QE E L A + + PL +++HK + V+G GAS+W V F+ NLWR L R+ + L + ++ +G +FGVLY+Q + N RN G +FS +V + + V M FP ++ +++RE+ +G N+ Y + R + P S ++M + Y+ G+ P A + + L+F N++ S+G SSFSANP+V ++I+P F+TPMI+FSG+L ER+SVP L WI+D+SV+NY+F ++ Q+ + G + F+Q Sbjct: 29 LEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQG--RIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAE---------PGVPLQE-------------ELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDW-VFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQ-LAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFN 607
BLAST of EWM24607.1 vs. NCBI_GenBank
Match: gi|553181628|ref|XP_005853597.1| (abc subfamily abcg, partial [Nannochloropsis gaditana CCMP526] >gi|553191702|ref|XP_005855436.1| abc subfamily abcg, partial [Nannochloropsis gaditana CCMP526] >gi|422293622|gb|EKU20922.1| abc subfamily abcg, partial [Nannochloropsis gaditana CCMP526] >gi|422295464|gb|EKU22763.1| abc subfamily abcg, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 362.844 bits (930), Expect = 1.814e-119 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 Query: 435 VLMNTALGLVFGVLYFQQIPHDNGRNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAFMIMGILPYFMVGLAPSAVAFGWYCLLFFIVNFAAQSIGYLASSFSANPVVGLSILPLFITPMILFSGMLYERNSVPPSLRWIQDISVMNYSF 612 VLMNTALGLVFGVLYFQQIPHDNGRNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAFMIMGILPYFMVGLAPSAVAFGWYCLLFFIVNFAAQSIGYLASSFSANPVVGLSILPLFITPMILFSGMLYERNSVPPSLRWIQDISVMNYSF Sbjct: 1 VLMNTALGLVFGVLYFQQIPHDNGRNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAFMIMGILPYFMVGLAPSAVAFGWYCLLFFIVNFAAQSIGYLASSFSANPVVGLSILPLFITPMILFSGMLYERNSVPPSLRWIQDISVMNYSF 178
BLAST of EWM24607.1 vs. NCBI_GenBank
Match: gi|585108726|gb|EWM26638.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 372.474 bits (955), Expect = 3.487e-117 Identity = 213/575 (37.04%), Postives = 329/575 (57.22%), Query Frame = 0 Query: 51 DVKTENGRLIVDDRESVSTCARVVLEWNISKYEIKLKKRKSL-TVLRSIAGRAENGSFNAVMGPSGCGKTSLLQCLALRTRDFEGSLTLNGKALTGAYFAHTGYVHQKELFFPHLTVREHLVFHALNHLSRHKSLEECIARVEAVMEEVDLTKVGDQKIGGGD-LYLVAGISGGERKRLNIATELLGNPRILLLDEPTSGLDSVMGELVCLLLKSIAVQAPRRLVLAAIHTPSSRVFTLVSHVTLLTSHGELAYWGPRDKLLLFLEGLGYRCPSYFNPADFILELASAKVIAGQAGAPGGVGGQELASPGNVSGSLLVESTSSGKLVAACKSTLSRDLAPLGVNNRHKEVVGVQGPGASNWAVSFRTNLWRSWLSQRREYVGLAVAVLMNTALGLVFGVLYFQQIPHDNGRNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAFMIMGILPYFMVGLAPSAVAFGWYCLLFFIVNFAAQSIGYLASSFSANPVVGLSILPLFITPMILFSGMLYERNSVPPSLRWIQDISVMNYSFALMVLNQVGHI 623 +V+ NG +++ VS R LEW++ Y + K+ +L+ IAG+ E+G A+MGPSGCGKT+LL+C++LR R F+G++ +G+A G F + VHQKEL F +T RE+L FH L + + + R++ V+ ++ L K D +GG D + G+SGGERKRL IA E+L P ++ LDEP+SGLDSVM E + LK +A R+VLA++H PSS L SH+ LLT G +AY GP + + + L Y CP ++NPADF L+L S A A G V +L L A + + R + PL +N+H+ + GV G AS + + N WR+ L RR+ + + +++ +GL+ G++Y QQ P + RN G LFSL+V + S+ V M FP ++AI++RE Y+GVN+ Y P + ++ + Y+M G+ P+ VA+ + ++ + A +G SS S NP+VG++ILP F+ PMI+FSG+LY++++VP L W+ +S++NYSF+ ++ Q+ HI Sbjct: 6 NVRHANG----EEKGVVSVGIRHTLEWHVEAYMVPAGKKGEFRNILQGIAGKTESGQLTAIMGPSGCGKTTLLECISLRNRRFDGAVHFDGRAPGGDAFTVSVLVHQKELLFGFMTPREYLTFHGLARMEHTHTRAQIDQRIQEVLSDMKLEKCADTLVGGTDPFFQKKGLSGGERKRLAIAYEMLLAPSMIFLDEPSSGLDSVMSESIFQSLKDLADGG--RIVLASVHCPSSEACQLFSHLMLLTYDGRVAYHGPTLQGIGYFSALKYFCPEHYNPADFYLKLIS---FTPGAEAEGEVQRMDL-------------------LNDAFQKSDMRLMKPLPTDNKHRGLAGVHGIKASTFTF-LKLNFWRATLRLRRDKTFVVLWGIISFIVGLLLGIIYLQQAP-ASWRNLLGLLFSLVVADIFMGSLGVIMRFPSEWAIIVRECYSGVNAVGPYLFASFWGILPMAYGPFLLVTVMYWMTGMDPNFVAYLKFAGIYLSFDIACLELGQFVSSLSGNPMVGMTILPAFVAPMIMFSGVLYQKSTVPVWLSWMHHVSLINYSFSALMAEQI-HI 549
BLAST of EWM24607.1 vs. NCBI_GenBank
Match: gi|585109266|gb|EWM27089.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 338.961 bits (868), Expect = 9.420e-104 Identity = 222/607 (36.57%), Postives = 332/607 (54.70%), Query Frame = 0 Query: 75 LEWNISKYEIKLKK-----RKSL---TVLRSIAGRAENGSFNAVMGPSGCGKTSLLQCLALRTRDFEGSLTLNGKALTGAYFAHTGYVHQKELFFPHLTVREHLVFHALNHLSRHKSLEECIARVEAVMEEVDLTKVGDQKIGG-GDLYLVAGISGGERKRLNIATELLGNPRILLLDEPTSGLDSVMGELVCLLLKSIAVQAPRRLVLAAIHTPSSRVFTLVSHVTLLTSHGELAYWGPRDKLLLFLEGLGYR-CPSYFNPADFILELASAKVIAGQAGAPGGVGGQELASPGNVSGSLLVESTSSGKL--VAACKSTLSRDLAPLGVNNRHKEVVGVQGPGASNWAVSFRTNLWRSWLSQRREYVGLAVAVLMNTALGLVFGVLYFQQIPHDNGRNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAFMIMGILPYFMVGLAPSAVAFGWYCLLFFIVNFAAQSIGYLASSFSANPVVGLSILPLFITPMILFSGMLYERNSVPPSLRWIQDISVMNYSFALMVLNQVGHIDGPARSFLIDFLQIKDSDFPGFLIALVSLSILYRVAAMGVLWVRVK 669 L W+I +++ ++ ++S+ ++L +AG++ G A+MG SG GKT+LL+CLALR+R F+G +T NG+A+ G YF + VHQ+E+ LTV EHL+FH +S S +E ARV V+E+V L+K +GG G G+SGGERKRL IATELL P+ + LDEPT+ LDSVM V LL+ +A+ R LV+A IH PSS++F+L SHV LLT+ G LA+ G LL+ R P +NPAD ++ L +K PGG G LV+S ++ + RD A N H+ + GVQG AS W + FR NL R L R + + ++ +GL FG LYFQQ + RN G L++L+V LL + V + P D+ +L+REY+AG N+ Y L + L P + +++ Y+M GL PS AF + + + A+ ++ + S SANP++ L ILP FITPM+LFSG LY+ ++P L W+ IS++NY FA ++ Q + R + F+ + L+ L +++++ L +R++ Sbjct: 42 LTWHIRSFKVGSQRCWPWTKRSIQRKSILTDVAGQSVGGEITAIMGASGAGKTTLLECLALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGTARMSDRFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGERKRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSR-RILVMATIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAYNPADHLVRLVVSK--------PGG--GASAREERRKENDWLVQSFAASAYGDPELPERGSHRDKA--CEENSHRSLRGVQGQHASAWTL-FRLNLRRGLLQTSRNSLSFWLYGMVMGVIGLCFGTLYFQQA-ASSWRNLVGLLYALVVALLYMCPLTVILRAPLDWPLLLREYFAGANAAGPYLLAKILYELPFAYGPLLLVAFLYWMTGLTPSLAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFITPMVLFSGFLYDTATLPSYLAWLPKISIVNYGFAALITLQQSLLPAELRGVALKFVNVDPEALGANLLMLTGMTVIFYALTYMFLTLRLR 633
BLAST of EWM24607.1 vs. NCBI_GenBank
Match: gi|585110513|gb|EWM28168.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 318.546 bits (815), Expect = 1.700e-95 Identity = 209/588 (35.54%), Postives = 319/588 (54.25%), Query Frame = 0 Query: 94 VLRSIAGRAENGSFNAVMGPSGCGKTSLLQCLALRTRDFEGSLTLNGKALTGAYFAHTGYVHQKELFFPHLTVREHLVFHALNHLSRHKSLEECIARVEAVMEEVDLTKVGDQKIGGGDLYLVAGISGGERKRLNIATELLGNPRILLLDEPTSGLDSVMGELVCLLLKSIAVQAPRRLVLAAIHTPSSRVFTLVSHVTLLTSHGELAYWGPR-DKLLLFLEGLGYRCPSYFNPADFILELASAKVIAGQAGAPGG-----VGGQELASPGNVSGSLLVESTSSGKLVAACKSTLSRDLAPLGVNNRHKEVVGVQGPGASNWAVSFRTNLWRSWLSQRREYVGLAVAVLMNTALGLVFGVLYFQQIPHDNG--RNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAF-MIMGILPYFMVGLAPSAVAFGWYCLLFFIVNFAAQSIGYLASSFSANPVVGLSILPLFITPMILFSGMLYERNSVPPSLRWIQDISVMNYSFALMVLNQVG--HIDGPARSFLIDFLQIKDSDFPGFLIA-LVSLSILYRVAAMGVLWVRVK 669 +L ++ G AE G A+MG SG GK+SLL C++LR FEG + L+ + +F+ + YVHQ +LFF LTVREHL FHA+ + + + + + RVE V++ V+LTKV D IGG + + G+SGGERKRL++ATELL +P I+ DEPTSGLD+ M VC +LK +A RLV IH PSS +F L +H+ LL + G+ AY+G R + F LG CP ++NPAD+++E + V+ + ELA + + E+ SG VAA S SR+ A++W F + R+ S RE V V + ++GL+ G++Y QQ P D+ +N G +F L++ IAS V P D A+ MREY N P YFLG +LA P + F I G + Y+++G AP A F + + ++ A+ S+GY S+ + + V +++ P+ + PM L++G+L+ + VP + +S++ Y+F +VLN+ G R+F+ +++ +++ GF IA LV L +R A L +R K Sbjct: 121 ILYNVVGHAEKGQMLALMGASGAGKSSLLDCISLRNHRFEGCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQAF-IRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSG--RLVACVIHQPSSEIFELFTHLMLL-ARGQTAYFGTRAGGVEYFASMLGLECPQFYNPADYLIEKLAVNVLLEKPEVAVEDMLRVYQSSELARDNEAWMADVEETAGSGMGVAALVS--SREFP------------------ATSW-TQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQQ-PFDSSATKNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEYGSDKYTPQLRNFVFEYIGVQEGQI-GFCIAMLVVLLFGFRFLAYVFLLIRAK 681
BLAST of EWM24607.1 vs. NCBI_GenBank
Match: gi|553179694|ref|XP_005852746.1| (abc subfamily abcg, partial [Nannochloropsis gaditana CCMP526] >gi|422295790|gb|EKU23089.1| abc subfamily abcg, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 316.62 bits (810), Expect = 4.410e-94 Identity = 208/588 (35.37%), Postives = 319/588 (54.25%), Query Frame = 0 Query: 94 VLRSIAGRAENGSFNAVMGPSGCGKTSLLQCLALRTRDFEGSLTLNGKALTGAYFAHTGYVHQKELFFPHLTVREHLVFHALNHLSRHKSLEECIARVEAVMEEVDLTKVGDQKIGGGDLYLVAGISGGERKRLNIATELLGNPRILLLDEPTSGLDSVMGELVCLLLKSIAVQAPRRLVLAAIHTPSSRVFTLVSHVTLLTSHGELAYWGPR-DKLLLFLEGLGYRCPSYFNPADFILELASAKVIAGQAGAPGG-----VGGQELASPGNVSGSLLVESTSSGKLVAACKSTLSRDLAPLGVNNRHKEVVGVQGPGASNWAVSFRTNLWRSWLSQRREYVGLAVAVLMNTALGLVFGVLYFQQIPHDNG--RNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAF-MIMGILPYFMVGLAPSAVAFGWYCLLFFIVNFAAQSIGYLASSFSANPVVGLSILPLFITPMILFSGMLYERNSVPPSLRWIQDISVMNYSFALMVLNQVG--HIDGPARSFLIDFLQIKDSDFPGFLIA-LVSLSILYRVAAMGVLWVRVK 669 +L ++ G AE G A+MG SG GK+SLL C++LR F+G + L+ + +F+ + YVHQ +LFF LTVREHL FHA+ + + + + + RVE V++ V+LTKV D IGG + + G+SGGERKRL++ATELL +P I+ DEPTSGLD+ M VC +LK +A RLV IH PSS +F L +H+ LL + G+ AY+G R + F LG CP ++NPAD+++E + V+ + ELA + + E+ SG VAA S SR+ A++W F + R+ S RE V V + ++GL+ G++Y QQ P D+ +N G +F L++ IAS V P D A+ MREY N P YFLG +LA P + F I G + Y+++G AP A F + + ++ A+ S+GY S+ + + V +++ P+ + PM L++G+L+ + VP + +S++ Y+F +VLN+ G R+F+ +++ +++ GF IA LV L +R A L +R K Sbjct: 189 ILYNVVGHAEKGQMLALMGASGAGKSSLLDCISLRNHRFDGCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQAF-IRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSG--RLVACVIHQPSSEIFELFTHLMLL-ARGQTAYFGTRAGGVEYFASMLGLECPQFYNPADYLIEKLAVNVLLEKPEVAVEDMLRVYQSSELARDNEAWMADVEETAGSGMGVAALVS--SREFP------------------ATSW-TQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQQ-PFDSSATKNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEYGSDKYTPQLRNFVFEYIGVQEGQI-GFCIAMLVVLLFGFRFLAYVFLLIRAK 749 The following BLAST results are available for this feature:
BLAST of EWM24607.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10 Position : 0 Zoom : x 1
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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