EWM24610.1, cds6058 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24610.1 vs. NCBI_GenBank
Match: gi|585106127|gb|EWM24610.1| (dna gyrase subunit b [Nannochloropsis gaditana]) HSP 1 Score: 1690.24 bits (4376), Expect = 0.000e+0 Identity = 825/825 (100.00%), Postives = 825/825 (100.00%), Query Frame = 0 Query: 1 MTARKGKARYAIETQTRGNLGFVAVVDRASNEWSSLFFTFNSCDTNFLDVKHRVRGQDIGLSNPWMVSRLPSRLSVVAASICFTTDMLSRPLGGMALVMLRLIGGWSGVRVFGFPTSSYPRLSGLSALASTRVSSDSQRRAFSVKPTANRRRRTVGMEATSIAPPPLPSMSSPPSTPVGGSYGADKITVLEGLEPVRKRPGMYIGSTGVKGLHHLIFEVVDNSIDEALAGHCTAVEVTIGEDGSVTVSDDGRGIPCEVHSKTGRSALETVLTVLHAGGKFGGDASGYKVSGGLHGVGVSVVNALSESLTATVRRDGKVHIMRFARGKPLGEMEINPDPDAVTGSSASGTSVRFKPDAEIFKTSTTFEFDRVSGRLDELAYLNAGIRIVMTDERGEGRRQEFFHEGGIREYVQLMCSSKEELHPDVAVIHAAGEKNGVAVEAALRWSKDQYDDLLIGFANGIRTGDGGTHLDGLKSVLTRTINSMARKAGKLKDGKDNLTGDFVREGLTAIVSVKVPDPEFEGQTKNRLGNPEVRGIVDTIVGESLVNTFEWNPRVLGAIVDKAMSAQQAAQAAKAARDMVRRKSLLQTTVLPGKLADCSSRDPGESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKAATEKIYQNTELQALISALGLGIKGNEFDPATLRYHRIMIMTDADVDGAHIRILLLTFLFRYQRALVERGYVYIACPPLYKVTQGKTVKYAYSQEELAEVQSSFKGKTALSLQRFKGLGEMMPVQLWETTMNPATRILKQVTIEDAAEADKMFMLLMGDAVGPRKDFINRNADALRLDDLDF 825 MTARKGKARYAIETQTRGNLGFVAVVDRASNEWSSLFFTFNSCDTNFLDVKHRVRGQDIGLSNPWMVSRLPSRLSVVAASICFTTDMLSRPLGGMALVMLRLIGGWSGVRVFGFPTSSYPRLSGLSALASTRVSSDSQRRAFSVKPTANRRRRTVGMEATSIAPPPLPSMSSPPSTPVGGSYGADKITVLEGLEPVRKRPGMYIGSTGVKGLHHLIFEVVDNSIDEALAGHCTAVEVTIGEDGSVTVSDDGRGIPCEVHSKTGRSALETVLTVLHAGGKFGGDASGYKVSGGLHGVGVSVVNALSESLTATVRRDGKVHIMRFARGKPLGEMEINPDPDAVTGSSASGTSVRFKPDAEIFKTSTTFEFDRVSGRLDELAYLNAGIRIVMTDERGEGRRQEFFHEGGIREYVQLMCSSKEELHPDVAVIHAAGEKNGVAVEAALRWSKDQYDDLLIGFANGIRTGDGGTHLDGLKSVLTRTINSMARKAGKLKDGKDNLTGDFVREGLTAIVSVKVPDPEFEGQTKNRLGNPEVRGIVDTIVGESLVNTFEWNPRVLGAIVDKAMSAQQAAQAAKAARDMVRRKSLLQTTVLPGKLADCSSRDPGESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKAATEKIYQNTELQALISALGLGIKGNEFDPATLRYHRIMIMTDADVDGAHIRILLLTFLFRYQRALVERGYVYIACPPLYKVTQGKTVKYAYSQEELAEVQSSFKGKTALSLQRFKGLGEMMPVQLWETTMNPATRILKQVTIEDAAEADKMFMLLMGDAVGPRKDFINRNADALRLDDLDF Sbjct: 1 MTARKGKARYAIETQTRGNLGFVAVVDRASNEWSSLFFTFNSCDTNFLDVKHRVRGQDIGLSNPWMVSRLPSRLSVVAASICFTTDMLSRPLGGMALVMLRLIGGWSGVRVFGFPTSSYPRLSGLSALASTRVSSDSQRRAFSVKPTANRRRRTVGMEATSIAPPPLPSMSSPPSTPVGGSYGADKITVLEGLEPVRKRPGMYIGSTGVKGLHHLIFEVVDNSIDEALAGHCTAVEVTIGEDGSVTVSDDGRGIPCEVHSKTGRSALETVLTVLHAGGKFGGDASGYKVSGGLHGVGVSVVNALSESLTATVRRDGKVHIMRFARGKPLGEMEINPDPDAVTGSSASGTSVRFKPDAEIFKTSTTFEFDRVSGRLDELAYLNAGIRIVMTDERGEGRRQEFFHEGGIREYVQLMCSSKEELHPDVAVIHAAGEKNGVAVEAALRWSKDQYDDLLIGFANGIRTGDGGTHLDGLKSVLTRTINSMARKAGKLKDGKDNLTGDFVREGLTAIVSVKVPDPEFEGQTKNRLGNPEVRGIVDTIVGESLVNTFEWNPRVLGAIVDKAMSAQQAAQAAKAARDMVRRKSLLQTTVLPGKLADCSSRDPGESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKAATEKIYQNTELQALISALGLGIKGNEFDPATLRYHRIMIMTDADVDGAHIRILLLTFLFRYQRALVERGYVYIACPPLYKVTQGKTVKYAYSQEELAEVQSSFKGKTALSLQRFKGLGEMMPVQLWETTMNPATRILKQVTIEDAAEADKMFMLLMGDAVGPRKDFINRNADALRLDDLDF 825
BLAST of EWM24610.1 vs. NCBI_GenBank
Match: gi|299117008|emb|CBN73779.1| (DNA topoisomerase IV subunit B [Ectocarpus siliculosus]) HSP 1 Score: 956.051 bits (2470), Expect = 0.000e+0 Identity = 477/665 (71.73%), Postives = 551/665 (82.86%), Query Frame = 0 Query: 168 PSMSSPPSTPVGGSYGADKITVLEGLEPVRKRPGMYIGSTGVKGLHHLIFEVVDNSIDEALAGHCTAVEVTIGEDGSVTVSDDGRGIPCEVHSKTGRSALETVLTVLHAGGKFGGDASGYKVSGGLHGVGVSVVNALSESLTATVRRDGKVHIMRFARGKPLGEMEINPDPDAVTGSSASGTSVRFKPDAEIFKTSTTFEFDRVSGRLDELAYLNAGIRIVMTDER------GEGRRQE-FFHEGGIREYVQLMCSSKEELHPDVAVIHAAGEKNGVAVEAALRWSKDQYDDLLIGFANGIRTGDGGTHLDGLKSVLTRTINSMARKAGKLKDGKDNLTGDFVREGLTAIVSVKVPDPEFEGQTKNRLGNPEVRGIVDTIVGESLVNTFEWNPRVLGAIVDKAMSAQQAAQAAKAARDMVRRKSLLQTTVLPGKLADCSSRDPGESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKAATEKIYQNTELQALISALGLGIKGNEFDPATLRYHRIMIMTDADVDGAHIRILLLTFLFRYQRALVERGYVYIACPPLYKVTQGKTVKYAYSQEELAEVQSSFKGKTALSLQRFKGLGEMMPVQLWETTMNPATRILKQVTIEDAAEADKMFMLLMGDAVGPRKDFINRNADALRLDDLDF 825 P+ + PS V G YGAD+ITVLEGLEPVRKRPGMYIGSTG KGLHHL+FEVVDN+IDEALAG+C V VT+ EDGS TV D+GRGIPC++H +T +SALETVLTVLHAGGKFGGD SGYKVSGGLHGVGVSVVNALS+ V R GK H + F RGK G++ D A A GT+VRF PD EIFKT+T FEF+R+SGR+DELAYLNAG+ IVM D R G ++ E + H+GG++E+V+LMC K+ LHPD+ VI A GE++GV VEA L WS D Y D L+ FANGIRTGDGGTHL+GLKS++TRT+NSM RK+GKLKD + NL GDFVREGLTA+VSVKVP+PEFEGQTKNRLGNPEVRGIVD+IVGE LV FEW+P++LGAI+DKA SAQ AA AAKAARDMVRRKSLL +TVLPGKLADC+SRDP ESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEK A+E+IYQN ELQALISALGLGIKGNEFD ++LRYHRI++MTDADVDG+HIRILLLTF FRYQR+L+E G+V+IACPPLYK+ QGKT KY Y+QEE S A+ LQRFKGLGEMMP QLW+TTM+PA R LK VT+EDAA AD++F +LMGD VGPRK+FIN +A+ L+LDDLDF Sbjct: 29 PAAAQAPSR-VDGDYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNAIDEALAGYCDTVYVTLEEDGSCTVRDNGRGIPCDIHPRTKKSALETVLTVLHAGGKFGGDESGYKVSGGLHGVGVSVVNALSQWAEVEVVRGGKRHSLSFERGKTQGDL-FTADAGA---EEAGGTAVRFLPDPEIFKTTTEFEFERLSGRMDELAYLNAGVSIVMADARSGVDEDGNFKKTETYLHKGGVQEFVELMCKEKQHLHPDMKVIRALGERDGVQVEACLSWSSDMYTDSLVSFANGIRTGDGGTHLEGLKSIVTRTVNSMGRKSGKLKDSQSNLGGDFVREGLTAVVSVKVPEPEFEGQTKNRLGNPEVRGIVDSIVGEELVKLFEWHPKILGAILDKASSAQAAAAAAKAARDMVRRKSLLTSTVLPGKLADCASRDPVESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKCASERIYQNNELQALISALGLGIKGNEFDASSLRYHRIVVMTDADVDGSHIRILLLTFFFRYQRSLIENGFVFIACPPLYKIKQGKTEKYVYTQEECDSAVSELPASPAVQLQRFKGLGEMMPQQLWDTTMDPARRTLKLVTVEDAAAADRIFSVLMGDNVGPRKEFINEHANNLKLDDLDF 688
BLAST of EWM24610.1 vs. NCBI_GenBank
Match: gi|938300441|gb|KPQ34004.1| (DNA gyrase subunit GyrB [Phormidesmis priestleyi Ana]) HSP 1 Score: 865.529 bits (2235), Expect = 0.000e+0 Identity = 423/654 (64.68%), Postives = 510/654 (77.98%), Query Frame = 0 Query: 178 VGGSYGADKITVLEGLEPVRKRPGMYIGSTGVKGLHHLIFEVVDNSIDEALAGHCTAVEVTIGEDGSVTVSDDGRGIPCEVHSKTGRSALETVLTVLHAGGKFGGDASGYKVSGGLHGVGVSVVNALSESLTATVRRDGKVHIMRFARGKPLGEMEINPDPDAVTGSSASGTSVRFKPDAEIFKTSTTFEFDRVSGRLDELAYLNAGIRIVMTDERGE------GRRQEFFHEGGIREYVQLMCSSKEELHPDVAVIHAAGEKNGVAVEAALRWSKDQYDDLLIGFANGIRTGDGGTHLDGLKSVLTRTINSMARKAGKLKDGKDNLTGDFVREGLTAIVSVKVPDPEFEGQTKNRLGNPEVRGIVDTIVGESLVNTFEWNPRVLGAIVDKAMSAQQAAQAAKAARDMVRRKSLLQTTVLPGKLADCSSRDPGESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKAATEKIYQNTELQALISALGLGIKGNEFDPATLRYHRIMIMTDADVDGAHIRILLLTFLFRYQRALVERGYVYIACPPLYKVTQGKTVKYAYSQEELAEVQSSFKGKTALSLQRFKGLGEMMPVQLWETTMNPATRILKQVTIEDAAEADKMFMLLMGDAVGPRKDFINRNADALRLDDLDF 825 + YGA +I VLEGLEPVRKRPGMYIGSTG +GLHHL++EV+DNS+DEALAGHC + + DGSVTV+DDGRGIP ++H TG+SALETVLTVLHAGGKFGGD SGYKVSGGLHGVGVSVVNALSE + TV R+GKVH RF +G P+G ++ GSS +GT V FKPDA IF +T F++D ++ RL ELAYLNAGI I TD R E R F +EGGI+EYV+ + + KE LHPDV I+ EKNGV VEAAL+W D Y D L+GFAN IRT DGGTHL+GLK+VLTRT+N +ARK K KDG+ N+ G+ +REGLTA+VSVKVPDPEFEGQTK +LGN EVRGIVD++VGE+L ++NP V AI++KA+ A AA+AAK ARD+VRRKS+L+++ LPGKL+DCSSRDP ESEI+IVEGDSA GSAKQGRDRR QAILPLRGKILNIEK KIY+N E+Q+LI+ALGLGIKG EFDPA LRYHRI +MTDADVDG+HIR LLLTF +RYQR LV++GY+YIACPPLYK+ +GK Y YS+ EL E ++ ++QRFKGLGEMMP QLW+TTMNP +R LK++ IEDAAEAD++F +LMGD V PR++FI + L + DLD Sbjct: 1 MANDYGAQQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVIDNSVDEALAGHCKHITAALNADGSVTVTDDGRGIPTDIHPTTGKSALETVLTVLHAGGKFGGD-SGYKVSGGLHGVGVSVVNALSEWVEVTVWREGKVHTQRFEQGNPIGTLKTE------KGSSKTGTQVIFKPDATIFTHTTEFDYDTIARRLRELAYLNAGIDITFTDYRLELLNIKQPRESRFCYEGGIKEYVEYINNDKEALHPDV--IYVNSEKNGVQVEAALQWCSDAYSDTLMGFANNIRTIDGGTHLEGLKAVLTRTMNVIARKRKKRKDGESNMAGENIREGLTAVVSVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEALTEYLDFNPGVADAILEKAIQAFNAAEAAKKARDLVRRKSVLESSTLPGKLSDCSSRDPAESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNNEVQSLITALGLGIKGEEFDPANLRYHRICLMTDADVDGSHIRTLLLTFFYRYQRDLVDQGYIYIACPPLYKLERGKNHTYCYSERELQEGIAALPENAKYNIQRFKGLGEMMPQQLWDTTMNPESRTLKKIEIEDAAEADRIFTVLMGDRVAPRREFIETHGPRLNMTDLDI 645
BLAST of EWM24610.1 vs. NCBI_GenBank
Match: gi|493501824|ref|WP_006456327.1| (DNA gyrase subunit B [Synechococcus sp. PCC 7335] >gi|196191597|gb|EDX86561.1| DNA gyrase, B subunit [Synechococcus sp. PCC 7335]) HSP 1 Score: 858.596 bits (2217), Expect = 0.000e+0 Identity = 419/654 (64.07%), Postives = 512/654 (78.29%), Query Frame = 0 Query: 178 VGGSYGADKITVLEGLEPVRKRPGMYIGSTGVKGLHHLIFEVVDNSIDEALAGHCTAVEVTIGEDGSVTVSDDGRGIPCEVHSKTGRSALETVLTVLHAGGKFGGDASGYKVSGGLHGVGVSVVNALSESLTATVRRDGKVHIMRFARGKPLGEMEINPDPDAVTGSSASGTSVRFKPDAEIFKTSTTFEFDRVSGRLDELAYLNAGIRIVMTDER------GEGRRQEFFHEGGIREYVQLMCSSKEELHPDVAVIHAAGEKNGVAVEAALRWSKDQYDDLLIGFANGIRTGDGGTHLDGLKSVLTRTINSMARKAGKLKDGKDNLTGDFVREGLTAIVSVKVPDPEFEGQTKNRLGNPEVRGIVDTIVGESLVNTFEWNPRVLGAIVDKAMSAQQAAQAAKAARDMVRRKSLLQTTVLPGKLADCSSRDPGESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKAATEKIYQNTELQALISALGLGIKGNEFDPATLRYHRIMIMTDADVDGAHIRILLLTFLFRYQRALVERGYVYIACPPLYKVTQGKTVKYAYSQEELAEVQSSFKGKTALSLQRFKGLGEMMPVQLWETTMNPATRILKQVTIEDAAEADKMFMLLMGDAVGPRKDFINRNADALRLDDLDF 825 + +YGA +I VLEGLEPVRKRPGMYIGSTG +GLHHL++EVVDN++DEALAGHCT + + DGSVTV+DDGRGIP ++H TG+SALETVLTVLHAGGKFGGD SGYKVSGGLHGVGVSVVNALSE + TV R+GKVH RF +G P+G+++ + GS+ +GT V FKPDA IF + F++D ++ RL ELAYLNAG+ I TD R + + +F+EGGIREYV+ + + KE LHPDV I+ +KNGV VEAAL+W D + D L+GFAN IRT DGGTHL+GLK+VLTRT+N +ARK K KD + N+ G+ +REGLTA+VSVKVPDPEFEGQTK +LGN EVRGIVD++VGE+L ++NP V AI++KA+ A AA+AAK ARD+VRRKS+L+++ LPGKL+DCSSRDPGESEI+IVEGDSA GSAKQGRDRR QAILPLRGKILNIEK KIY+N E+Q+LI+ALGLGIKG +F P TLRYHRI +MTDADVDGAHIR LLLTF +RYQR LV++GY+YIACPPLYK+ +GK Y YS++EL + + ++QRFKGLGEMMP QLW+TTMNP TR LK+V IEDAAEAD++F +LMGD V PR+DFI L + DLD Sbjct: 1 MANNYGAQQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNAVDEALAGHCTHITAALNADGSVTVTDDGRGIPTDIHPTTGKSALETVLTVLHAGGKFGGD-SGYKVSGGLHGVGVSVVNALSEWVEVTVWREGKVHTQRFEQGNPIGKLKTS------KGSTKTGTQVTFKPDATIFTHTVEFDYDTIARRLRELAYLNAGVDITFTDYRLDLIKADKPQVSHYFYEGGIREYVEYINNEKEPLHPDV--IYVNSDKNGVQVEAALQWCGDAFSDNLMGFANNIRTVDGGTHLEGLKTVLTRTMNVIARKRKKRKDTESNMAGENIREGLTAVVSVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEALTEYLDFNPSVADAILEKAIQAFNAAEAAKKARDLVRRKSVLESSTLPGKLSDCSSRDPGESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNNEVQSLITALGLGIKGEDFAPDTLRYHRICLMTDADVDGAHIRTLLLTFFYRYQRDLVDQGYIYIACPPLYKLERGKNHTYCYSEKELQDGIDAMPTNAKYNIQRFKGLGEMMPQQLWDTTMNPETRTLKRVEIEDAAEADRIFTVLMGDRVAPRRDFIETYGPRLNMADLDI 645
BLAST of EWM24610.1 vs. NCBI_GenBank
Match: gi|1200600903|gb|OUX10311.1| (DNA topoisomerase (ATP-hydrolyzing) subunit B [Planctomycetaceae bacterium TMED241]) HSP 1 Score: 849.736 bits (2194), Expect = 0.000e+0 Identity = 418/658 (63.53%), Postives = 513/658 (77.96%), Query Frame = 0 Query: 175 STPVGGSYGADKITVLEGLEPVRKRPGMYIGSTGVKGLHHLIFEVVDNSIDEALAGHCTAVEVTIGEDGSVTVSDDGRGIPCEVHSKTGRSALETVLTVLHAGGKFGGDASGYKVSGGLHGVGVSVVNALSESLTATVRRDGKVHIMRFARGKPLGEMEINPDPDAVTGSSASGTSVRFKPDAEIFKTSTTFEFDRVSGRLDELAYLNAGIRIVMTDER-------GEGRRQEFFHEGGIREYVQLMCSSKEELHPDVAVIHAAGEKNGVAVEAALRWSKDQYDDLLIGFANGIRTGDGGTHLDGLKSVLTRTINSMARKAGKLKDGKDNLTGDFVREGLTAIVSVKVPDPEFEGQTKNRLGNPEVRGIVDTIVGESLVNTFEWNPRVLGAIVDKAMSAQQAAQAAKAARDMVRRKSLLQTTVLPGKLADCSSRDPGESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKAATEKIYQNTELQALISALGLGIKGNEFDPATLRYHRIMIMTDADVDGAHIRILLLTFLFRYQRALVERGYVYIACPPLYKVTQGKTVKYAYSQEELAEVQSSFKGKTALSLQRFKGLGEMMPVQLWETTMNPATRILKQVTIEDAAEADKMFMLLMGDAVGPRKDFINRNADALRLDDLDF 825 ++ V +YGA++I VLEGLEPVRKRPGMYIGSTG +GLHHL++EVVDNS+DEALAGHC + V +GEDGS ++SD+GRGIP +VH +TG+SALETVLTVLHAGGKFG + GYKVSGGLHGVGVSVVNALSE + TVRR G+VH RF RG P+G + P PD +GTSV FKPD EIF F++ +S RL ELAYLN G+RIV DER G + +F+EGGI+EYV M KE LHP++ I+ EK+GV VEAAL+W D Y D ++GFAN IRT DGGTH++GLK+VLTRT+N+ A+K GK K+ NL G+ +REGLTA++SVKVP+PEFEGQTK +LGN EVRGIVD +VGESL E+NP V+G I++KA+ A AA+AA+ AR++VRRKS+L+++ LPGKLADCSSRDPGESEIYIVEGDSA GSAKQGRDRR QAILPLRGKILNIEK KIY+NTE+QALI+ALGLGIKG +FD LRYHRI+IMTDADVDGAHIR L+LTF +RYQ+ALVE GY+YIACPPLYKV +GK Y Y++ +L + F K ++QRFKGLGEMMP QLWETTM+P+TR++K++ IEDA EAD++F +LMGD V PR++FI ++ L + LD Sbjct: 4 ASKVQNAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDQIVVVLGEDGSASISDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQGQVHRQRFERGAPIGSLASEPLPDE--EQDRTGTSVCFKPDQEIFTVGIIFDYATLSARLRELAYLNGGVRIVFRDERESAREADGSAHEEIYFYEGGIKEYVSYMNKEKEALHPEI--IYVNSEKDGVQVEAALQWCADAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNAFAKKLGKRKEADSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDNLVGESLSQFLEFNPSVIGLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPGESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFDEKNLRYHRIVIMTDADVDGAHIRTLILTFFYRYQKALVEGGYIYIACPPLYKVERGKNHTYCYNESDLQKTLKGFGEKANYTIQRFKGLGEMMPKQLWETTMDPSTRMMKRIEIEDALEADRIFTILMGDKVAPRREFIETHSAELDMAALDI 655
BLAST of EWM24610.1 vs. NCBI_GenBank
Match: gi|498000048|ref|WP_010314204.1| (DNA gyrase subunit B [Synechococcus sp. CB0205]) HSP 1 Score: 849.736 bits (2194), Expect = 0.000e+0 Identity = 422/658 (64.13%), Postives = 512/658 (77.81%), Query Frame = 0 Query: 175 STPVGGSYGADKITVLEGLEPVRKRPGMYIGSTGVKGLHHLIFEVVDNSIDEALAGHCTAVEVTIGEDGSVTVSDDGRGIPCEVHSKTGRSALETVLTVLHAGGKFGGDASGYKVSGGLHGVGVSVVNALSESLTATVRRDGKVHIMRFARGKPLGEMEINPDPDAVTGSSASGTSVRFKPDAEIFKTSTTFEFDRVSGRLDELAYLNAGIRIVMTDER-------GEGRRQEFFHEGGIREYVQLMCSSKEELHPDVAVIHAAGEKNGVAVEAALRWSKDQYDDLLIGFANGIRTGDGGTHLDGLKSVLTRTINSMARKAGKLKDGKDNLTGDFVREGLTAIVSVKVPDPEFEGQTKNRLGNPEVRGIVDTIVGESLVNTFEWNPRVLGAIVDKAMSAQQAAQAAKAARDMVRRKSLLQTTVLPGKLADCSSRDPGESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKAATEKIYQNTELQALISALGLGIKGNEFDPATLRYHRIMIMTDADVDGAHIRILLLTFLFRYQRALVERGYVYIACPPLYKVTQGKTVKYAYSQEELAEVQSSFKGKTALSLQRFKGLGEMMPVQLWETTMNPATRILKQVTIEDAAEADKMFMLLMGDAVGPRKDFINRNADALRLDDLDF 825 +T V +YGA++I VLEGLEPVRKRPGMYIGSTG +GLHHL++EVVDNS+DEALAGHC + V I EDGS +VSD+GRGIP +VH KTG+SALETVLTVLHAGGKFG A GYKVSGGLHGVGVSVVNALSE + V R GK H RF RG P+G + I P DA S +GT+VRFKPD EIF F+++ +S RL ELAYLN G++IV DER GE + + +EGGI+EYV M + K+ LHPD+ I+ EK+GV +EAAL+W D Y D + GFAN IRT DGGTH++GLK+VLTRT+N+ A+K GK K+ NL G+ +REGLTA++SVKVPDPEFEGQTK +LGN EVRGIVD++VGE+L E+NP V+ I++KA+ A AA+AA+ AR++VRRKS+L+++ LPGKLADCSSRDPGESEIYIVEGDSA GSAKQGRDRR QAILPLRGKILNIEK KIY+NTE+QALI+ALGLGIKG EFD LRYHRI+IMTDADVDGAHIR LLLTF +RYQ++LVE GY+YIACPPLYKV +GK Y Y++ +L F K ++QRFKGLGEMMP QLWETTM+P+TR++K+V I DAAEAD++F +LMGD V PR++FI ++ L L LD Sbjct: 4 ATKVQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCNEIRVAIEEDGSCSVSDNGRGIPTDVHPKTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVEVVVYRQGKEHRQRFERGAPIGTLAIEPAADA----SRTGTTVRFKPDLEIFTVGIEFDYNTLSARLRELAYLNGGVKIVFRDERPAARNAEGEAHEEIYHYEGGIKEYVAYMNAEKDALHPDI--IYVNSEKDGVQIEAALQWCVDAYSDNIFGFANNIRTVDGGTHIEGLKTVLTRTLNTFAKKRGKRKESDSNLAGENIREGLTAVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEALGEYLEFNPSVIDLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPGESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFDDKNLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQKSLVEGGYIYIACPPLYKVERGKNHTYCYNEADLKTTIEGFGEKANFTIQRFKGLGEMMPKQLWETTMDPSTRMMKRVEIADAAEADRIFTILMGDKVAPRREFIETHSAELDLAQLDI 653
BLAST of EWM24610.1 vs. NCBI_GenBank
Match: gi|760010881|ref|WP_043694188.1| (DNA gyrase subunit B [Synechococcus sp. KORDI-49] >gi|670930706|gb|AII46667.1| DNA gyrase subunit B [Synechococcus sp. KORDI-49] >gi|1200602151|gb|OUX11518.1| DNA gyrase subunit B [Planctomycetaceae bacterium TMED241]) HSP 1 Score: 849.351 bits (2193), Expect = 0.000e+0 Identity = 418/658 (63.53%), Postives = 513/658 (77.96%), Query Frame = 0 Query: 175 STPVGGSYGADKITVLEGLEPVRKRPGMYIGSTGVKGLHHLIFEVVDNSIDEALAGHCTAVEVTIGEDGSVTVSDDGRGIPCEVHSKTGRSALETVLTVLHAGGKFGGDASGYKVSGGLHGVGVSVVNALSESLTATVRRDGKVHIMRFARGKPLGEMEINPDPDAVTGSSASGTSVRFKPDAEIFKTSTTFEFDRVSGRLDELAYLNAGIRIVMTDER-------GEGRRQEFFHEGGIREYVQLMCSSKEELHPDVAVIHAAGEKNGVAVEAALRWSKDQYDDLLIGFANGIRTGDGGTHLDGLKSVLTRTINSMARKAGKLKDGKDNLTGDFVREGLTAIVSVKVPDPEFEGQTKNRLGNPEVRGIVDTIVGESLVNTFEWNPRVLGAIVDKAMSAQQAAQAAKAARDMVRRKSLLQTTVLPGKLADCSSRDPGESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKAATEKIYQNTELQALISALGLGIKGNEFDPATLRYHRIMIMTDADVDGAHIRILLLTFLFRYQRALVERGYVYIACPPLYKVTQGKTVKYAYSQEELAEVQSSFKGKTALSLQRFKGLGEMMPVQLWETTMNPATRILKQVTIEDAAEADKMFMLLMGDAVGPRKDFINRNADALRLDDLDF 825 ++ V +YGA++I VLEGLEPVRKRPGMYIGSTG +GLHHL++EVVDNS+DEALAGHC + V +GEDGS ++SD+GRGIP +VH +TG+SALETVLTVLHAGGKFG + GYKVSGGLHGVGVSVVNALSE + TVRR G+VH RF RG P+G + P PD +GTSV FKPD EIF F++ +S RL ELAYLN G+RIV DER G + +F+EGGI+EYV M KE LHP++ I+ EK+GV VEAAL+W D Y D ++GFAN IRT DGGTH++GLK+VLTRT+N+ A+K GK K+ NL G+ +REGLTA++SVKVP+PEFEGQTK +LGN EVRGIVD +VGESL E+NP V+G I++KA+ A AA+AA+ AR++VRRKS+L+++ LPGKLADCSSRDPGESEIYIVEGDSA GSAKQGRDRR QAILPLRGKILNIEK KIY+NTE+QALI+ALGLGIKG +FD LRYHRI+IMTDADVDGAHIR L+LTF +RYQ+ALVE GY+YIACPPLYKV +GK Y Y++ +L + F K ++QRFKGLGEMMP QLWETTM+P+TR++K++ IEDA EAD++F +LMGD V PR++FI ++ L + LD Sbjct: 4 ASKVQNAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDQIVVVLGEDGSASISDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQGQVHRQRFERGAPIGSLASEPLPDG--EQDRTGTSVCFKPDQEIFTVGIIFDYATLSARLRELAYLNGGVRIVFRDERESAREADGSAHEEIYFYEGGIKEYVSYMNKEKEALHPEI--IYVNSEKDGVQVEAALQWCADAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNAFAKKLGKRKEADSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDNLVGESLSQFLEFNPSVIGLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPGESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFDEKNLRYHRIVIMTDADVDGAHIRTLILTFFYRYQKALVEGGYIYIACPPLYKVERGKNHTYCYNESDLQKTLKGFGEKANYTIQRFKGLGEMMPKQLWETTMDPSTRMMKRIEIEDALEADRIFTILMGDKVAPRREFIETHSAELDMAALDI 655
BLAST of EWM24610.1 vs. NCBI_GenBank
Match: gi|500467676|ref|WP_011934510.1| (DNA gyrase subunit B [Synechococcus sp. RCC307] >gi|147849501|emb|CAK26995.1| DNA gyrase subunit B [Synechococcus sp. RCC307]) HSP 1 Score: 844.729 bits (2181), Expect = 0.000e+0 Identity = 420/666 (63.06%), Postives = 515/666 (77.33%), Query Frame = 0 Query: 167 LPSMSSPPSTPVGGSYGADKITVLEGLEPVRKRPGMYIGSTGVKGLHHLIFEVVDNSIDEALAGHCTAVEVTIGEDGSVTVSDDGRGIPCEVHSKTGRSALETVLTVLHAGGKFGGDASGYKVSGGLHGVGVSVVNALSESLTATVRRDGKVHIMRFARGKPLGEMEINPDPDAVTGSSASGTSVRFKPDAEIFKTSTTFEFDRVSGRLDELAYLNAGIRIVMTDER-------GEGRRQEFFHEGGIREYVQLMCSSKEELHPDVAVIHAAGEKNGVAVEAALRWSKDQYDDLLIGFANGIRTGDGGTHLDGLKSVLTRTINSMARKAGKLKDGKDNLTGDFVREGLTAIVSVKVPDPEFEGQTKNRLGNPEVRGIVDTIVGESLVNTFEWNPRVLGAIVDKAMSAQQAAQAAKAARDMVRRKSLLQTTVLPGKLADCSSRDPGESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKAATEKIYQNTELQALISALGLGIKGNEFDPATLRYHRIMIMTDADVDGAHIRILLLTFLFRYQRALVERGYVYIACPPLYKVTQGKTVKYAYSQEELAEVQSSFKGKTALSLQRFKGLGEMMPVQLWETTMNPATRILKQVTIEDAAEADKMFMLLMGDAVGPRKDFINRNADALRLDDLDF 825 + + P S+ V +YGA++I VLEGLEPVRKRPGMYIGSTG +GLHHL++EVVDNS+DEALAGHC ++V + DGS +V+D+GRGIP +VH +TG+SALETVLTVLHAGGKFG + GYKVSGGLHGVGVSVVNALSE + TV R KVH RF RG P+G + TG TSV FKPD EIF +F++ +SGRL ELAYLN G++IV DER G+ + +F+EGGIREYV M + K+ LHPD+ I+ EK+GV VEAAL+W D Y D ++GFAN IRT DGGTH++GLK+VLTRT+N+ ARK GK KD NL G+ +REGLTA++SVKVPDPEFEGQTK +LGN EVRGIVDT+VGE+L E++P+V+ I++KA+ A AA+AA+ AR++VRRKS+L+++ LPGKLADCSSRDP ESEIYIVEGDSA GSAKQGRDRR QAILPLRGKILNIEK KIY+NTE+QALI+ALGLGIKG EFD + LRYHRI+IMTDADVDGAHIR L+LTF +RYQR LVE GY+YIACPPLYKV +GK Y Y++++L + F K ++QRFKGLGEMMP QLWETTM+P TR +K+V IEDAA+AD++F +LMGD V PR++FI ++ L L DLD Sbjct: 1 MSEATRPSSSQVQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCNTIDVCLRADGSCSVADNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGVSVVNALSEWVEVTVHRQDKVHRQRFERGAPIGSLASEAGEKGRTG-----TSVCFKPDIEIFTGGISFDYATLSGRLRELAYLNGGVKIVFRDERPEAAGEDGQPHEEIYFYEGGIREYVNYMNAEKDPLHPDI--IYVNSEKDGVQVEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNTFARKRGKRKDSDGNLAGENIREGLTAVLSVKVPDPEFEGQTKTKLGNTEVRGIVDTVVGEALSEYLEFHPQVIDLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRNQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFDVSNLRYHRIVIMTDADVDGAHIRTLILTFFYRYQRELVEGGYIYIACPPLYKVERGKNHTYCYNEQDLKKTLDGFGEKANYTIQRFKGLGEMMPQQLWETTMDPTTRTMKRVEIEDAAQADRIFTILMGDKVAPRREFIETHSAELNLADLDI 657
BLAST of EWM24610.1 vs. NCBI_GenBank
Match: gi|492912174|ref|WP_006042580.1| (DNA gyrase subunit B [Synechococcus sp. WH 7805] >gi|88786108|gb|EAR17270.1| DNA topoisomerase IV subunit B [Synechococcus sp. WH 7805]) HSP 1 Score: 844.343 bits (2180), Expect = 0.000e+0 Identity = 416/655 (63.51%), Postives = 511/655 (78.02%), Query Frame = 0 Query: 178 VGGSYGADKITVLEGLEPVRKRPGMYIGSTGVKGLHHLIFEVVDNSIDEALAGHCTAVEVTIGEDGSVTVSDDGRGIPCEVHSKTGRSALETVLTVLHAGGKFGGDASGYKVSGGLHGVGVSVVNALSESLTATVRRDGKVHIMRFARGKPLGEMEINPDPDAVTGSSASGTSVRFKPDAEIFKTSTTFEFDRVSGRLDELAYLNAGIRIVMTDERGEGRRQE-------FFHEGGIREYVQLMCSSKEELHPDVAVIHAAGEKNGVAVEAALRWSKDQYDDLLIGFANGIRTGDGGTHLDGLKSVLTRTINSMARKAGKLKDGKDNLTGDFVREGLTAIVSVKVPDPEFEGQTKNRLGNPEVRGIVDTIVGESLVNTFEWNPRVLGAIVDKAMSAQQAAQAAKAARDMVRRKSLLQTTVLPGKLADCSSRDPGESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKAATEKIYQNTELQALISALGLGIKGNEFDPATLRYHRIMIMTDADVDGAHIRILLLTFLFRYQRALVERGYVYIACPPLYKVTQGKTVKYAYSQEELAEVQSSFKGKTALSLQRFKGLGEMMPVQLWETTMNPATRILKQVTIEDAAEADKMFMLLMGDAVGPRKDFINRNADALRLDDLDF 825 V +YGA++I VLEGLEPVRKRPGMYIG+TG +GLHHL++EVVDNS+DEALAGHCT ++V +GEDGS ++D+GRGIP +VH +TG+SALETVLTVLHAGGKFG A GYKVSGGLHGVGVSVVNALSE + TVRR +VH RF RG P+G + P P G + GTSVRFKPD EIF F++ +S RL ELAYLN G+RIV DER R E +F+EGGI+EYV M + K+ LHP++ ++A EK+GV+VEAAL+W D Y D ++GFAN IRT DGGTH++GLK+VLTRT+N+ A+K GK K+ NL G+ +REGLTA++SVKVP+PEFEGQTK +LGN EVRGIVD++VGESL E+NP V+ I++KA+ A AA+AA+ AR++VRRKS+L+++ LPGKLADCSSRDP ESEIYIVEGDSA GSAKQGRDRR QAILPLRGKILNIEK KIY+NTE+Q+LI+ALGLGIKG +FD LRYHR++IMTDADVDGAHIR LLLTF +RYQ+ LVE GY+YIACPPLYKV +GK Y Y++ EL + F K ++QRFKGLGEMMP QLWETTM+P TR +K+V IEDA EAD++F +LMGD V PR++FI ++ L + LD Sbjct: 7 VQAAYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCTEIQVVLGEDGSACITDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVDVTVRRQAQVHRQRFERGAPIGSLVSEPQPAEEEGRT--GTSVRFKPDIEIFTVGIVFDYATLSARLRELAYLNGGVRIVFRDERENARDAEGNPHEEIYFYEGGIKEYVAYMNAEKDALHPEIIYVNA--EKDGVSVEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNTFAKKRGKRKESDSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGESLSQYLEFNPGVIDMILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQSLITALGLGIKGEDFDVKNLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQKELVEGGYIYIACPPLYKVERGKNHTYCYNESELQKTLEGFGEKANYNIQRFKGLGEMMPKQLWETTMDPTTRTMKRVEIEDALEADRIFTILMGDKVAPRREFIETHSAELDMAALDI 655
BLAST of EWM24610.1 vs. NCBI_GenBank
Match: gi|1055233005|ref|WP_066911326.1| (MULTISPECIES: DNA gyrase subunit B [Synechococcus] >gi|1022154821|gb|KZR84326.1| DNA gyrase subunit B [Synechococcus sp. MIT S9504] >gi|1022159822|gb|KZR89213.1| DNA gyrase subunit B [Synechococcus sp. MIT S9509]) HSP 1 Score: 844.343 bits (2180), Expect = 0.000e+0 Identity = 412/658 (62.61%), Postives = 518/658 (78.72%), Query Frame = 0 Query: 175 STPVGGSYGADKITVLEGLEPVRKRPGMYIGSTGVKGLHHLIFEVVDNSIDEALAGHCTAVEVTIGEDGSVTVSDDGRGIPCEVHSKTGRSALETVLTVLHAGGKFGGDASGYKVSGGLHGVGVSVVNALSESLTATVRRDGKVHIMRFARGKPLGEMEINPDPDAVTGSSASGTSVRFKPDAEIFKTSTTFEFDRVSGRLDELAYLNAGIRIVMTDER-----GEGRRQE--FFHEGGIREYVQLMCSSKEELHPDVAVIHAAGEKNGVAVEAALRWSKDQYDDLLIGFANGIRTGDGGTHLDGLKSVLTRTINSMARKAGKLKDGKDNLTGDFVREGLTAIVSVKVPDPEFEGQTKNRLGNPEVRGIVDTIVGESLVNTFEWNPRVLGAIVDKAMSAQQAAQAAKAARDMVRRKSLLQTTVLPGKLADCSSRDPGESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKAATEKIYQNTELQALISALGLGIKGNEFDPATLRYHRIMIMTDADVDGAHIRILLLTFLFRYQRALVERGYVYIACPPLYKVTQGKTVKYAYSQEELAEVQSSFKGKTALSLQRFKGLGEMMPVQLWETTMNPATRILKQVTIEDAAEADKMFMLLMGDAVGPRKDFINRNADALRLDDLDF 825 + V +YGA++I VLEGLEPVRKRPGMYIG+TG +GLHHL++EVVDNS+DEALAGHCT ++V +GEDGS ++D+GRGIP +VH +TG+SALETVLTVLHAGGKFG A GYKVSGGLHGVGVSVVNALSE + TVRR GK+H RF RG P+G +E P + G +GTSVRFKPD EIF F++ +S RL ELAYLN G++IV DER EG+ E +F+EGGI+EYV M + K+ LHP++ ++A EK+GV++EAA++W D Y D ++GFAN IRT DGGTH++GLK+VLTRT+N+ ARK GK K+ NL G+ +REGLTA++SVKVP+PEFEGQTK +LGN EVRGIVD +VGE+L E+NP V+ I++KA+ A AA+AA+ AR++VRRKS+L+++ LPGKLADCSSRDP ESEIYIVEGDSA GSAKQGRDRR QAILPLRGKILNIEK KIY+NTE+QALI+ALGLGIKG +FD LRYHR++IMTDADVDGAHIR L+LTF +RYQ+ LVE GY+YIACPPLYKV +GK Y Y++++L + F K ++QRFKGLGEMMP QLWETTM+P+TR++K+V ++DA EAD++F +LMGD V PR++FI ++ L + LD Sbjct: 4 AAKVQAAYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCTEIQVLLGEDGSACITDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQGKLHRQRFERGAPIGSLESEDQPSSEKG--LTGTSVRFKPDIEIFTVGIEFDYATLSARLRELAYLNGGVKIVFRDERETARDAEGQPHEEIYFYEGGIKEYVAYMNAEKDALHPEIIYVNA--EKDGVSIEAAMQWCVDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNTFARKRGKRKEADSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDNLVGEALSQYLEFNPGVIDMILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPAESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFDAKNLRYHRVVIMTDADVDGAHIRTLILTFFYRYQKELVEGGYIYIACPPLYKVERGKKHSYCYNEQQLQKTLDGFGEKANYNIQRFKGLGEMMPQQLWETTMDPSTRMMKRVEVQDALEADRIFTILMGDKVAPRREFIETHSAELDMSALDI 655 The following BLAST results are available for this feature:
BLAST of EWM24610.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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