EWM24621.1, cds6044 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24621.1 vs. NCBI_GenBank
Match: gi|585106141|gb|EWM24621.1| (Peptidyl-prolyl cis-trans isomerase, FKBP-type [Nannochloropsis gaditana]) HSP 1 Score: 756.903 bits (1953), Expect = 0.000e+0 Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 0 Query: 1 MQPLQAYCLLGALLTSFGASRAFLIIPRSRLSSSTFARRCNIAIRMSTKDEVDTTSKSSTPLPSAPLGGMPPAPPASVGRRRPDPEKGASYFDFEDETAPSVPQQLEGDLLRDGGVMKTIITAGEGPLVTPGAEVAVKYEGRTADGQVLCRGEDFRFLQGDGTMIGGFETAVGSMRVGEVARVQIQPWYAYGSAGVSPVVGPDMPLDFDIEVLEASGNFLNPKSFRDVDPKKLRDAKSIARDYAQRSELRMRNEEGLSNAEKASRWFKSLYFFGFFEGETGERPPWYLTPTITFPIIETWCWRTVWTWGRLSWIKSLLNYPCLHADVPYRQRVFPIVAGPLGARACIQKMFPGSKVADNTLAGHPDLSLP 370 MQPLQAYCLLGALLTSFGASRAFLIIPRSRLSSSTFARRCNIAIRMSTKDEVDTTSKSSTPLPSAPLGGMPPAPPASVGRRRPDPEKGASYFDFEDETAPSVPQQLEGDLLRDGGVMKTIITAGEGPLVTPGAEVAVKYEGRTADGQVLCRGEDFRFLQGDGTMIGGFETAVGSMRVGEVARVQIQPWYAYGSAGVSPVVGPDMPLDFDIEVLEASGNFLNPKSFRDVDPKKLRDAKSIARDYAQRSELRMRNEEGLSNAEKASRWFKSLYFFGFFEGETGERPPWYLTPTITFPIIETWCWRTVWTWGRLSWIKSLLNYPCLHADVPYRQRVFPIVAGPLGARACIQKMFPGSKVADNTLAGHPDLSLP Sbjct: 1 MQPLQAYCLLGALLTSFGASRAFLIIPRSRLSSSTFARRCNIAIRMSTKDEVDTTSKSSTPLPSAPLGGMPPAPPASVGRRRPDPEKGASYFDFEDETAPSVPQQLEGDLLRDGGVMKTIITAGEGPLVTPGAEVAVKYEGRTADGQVLCRGEDFRFLQGDGTMIGGFETAVGSMRVGEVARVQIQPWYAYGSAGVSPVVGPDMPLDFDIEVLEASGNFLNPKSFRDVDPKKLRDAKSIARDYAQRSELRMRNEEGLSNAEKASRWFKSLYFFGFFEGETGERPPWYLTPTITFPIIETWCWRTVWTWGRLSWIKSLLNYPCLHADVPYRQRVFPIVAGPLGARACIQKMFPGSKVADNTLAGHPDLSLP 370
BLAST of EWM24621.1 vs. NCBI_GenBank
Match: gi|299117363|emb|CBN75319.1| (FKBP-type peptidyl-prolyl cis-trans isomerase 7 [Ectocarpus siliculosus]) HSP 1 Score: 132.88 bits (333), Expect = 1.618e-33 Identity = 64/158 (40.51%), Postives = 95/158 (60.13%), Query Frame = 0 Query: 147 QVLCRGEDFRFLQGDGTMIGGFETAVGSMRVGEVARVQIQPWYAYGSAGVSPVVGPDMPLDFDIEVLEASGNFLNPKSFRDVDPKKLRDAKSIARDY---AQRSELRMRNEEGLSNAEKASRWFKSLYFFGFFEGETGERPPWYLTPTITFPIIETWC 301 +V +G+++ DGTMI G++T + +R G+ A ++ Y YG+ GV+P+V P+ L FD+E+LE GN +NP +F D +P R +IA + ++R L + + L +K W K++Y FG FEGETGE PWYL P ITFPI+ T C Sbjct: 4 KVFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAAADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITIC 161
BLAST of EWM24621.1 vs. NCBI_GenBank
Match: gi|873239217|emb|CEL94530.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 130.568 bits (327), Expect = 2.632e-31 Identity = 74/197 (37.56%), Postives = 109/197 (55.33%), Query Frame = 0 Query: 107 EGDLLRDGGVMKTIITAGEGPLVTPGAEVAVKYEGRTAD-GQVLCRGEDFRFLQGDGTMIGGFETAVGSMRVGEVARVQIQPWYAYGSAGVSPVVGPDMPLDFDIEVLEASGNFLNPKSFRDVDPKKLRDAKSIARDYAQRSELRMRNEEGLSNAEKASRWFKSLYFFGFFEGETGERPPWYLTPTITFPIIETWCW 302 E D+ RDGGV+K ++ G G L G V ++Y G+ A+ G+V RG+DFR + DG+MI G++ A+ +M+ GEVA V I P YAYG GV PV+ P+ PL F+IE+ E G + K ++D I D ++ + + + E L++ EK W SL FFG PWY+ P + +P TW + Sbjct: 91 EEDVSRDGGVVKRVVREGYGKLAQGGGFVKLRYTGKLAETGRVFARGDDFRCMVADGSMIKGWDLALRTMKEGEVAEVVIAPKYAYGVKGVPPVIPPNAPLLFEIELTEYEGTPYDLKLGLNID--------KIETDTEKKRKDKEKAEAALTDMEKFKNWLNSLQFFGVVTAGYRRGVPWYVNPLVLYP---TWFF 276
BLAST of EWM24621.1 vs. NCBI_GenBank
Match: gi|546312697|ref|XP_005715051.1| (unnamed protein product [Chondrus crispus] >gi|507111513|emb|CDF35232.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 124.79 bits (312), Expect = 1.163e-28 Identity = 73/198 (36.87%), Postives = 106/198 (53.54%), Query Frame = 0 Query: 109 DLLRDGGVMKTIITAGEGPLVTPGAEVAVKYEGRTADGQVL----CRGEDFRFLQGDGTMIGGFETAVGSMRVGEVARVQIQPWYAYGSAGVSPVVGPDMPLDFDIEVLE-ASGNFLNPKSFRDVDPKKLRDAKSIARDYAQRSELRMRNEEGLSNAEKASRWFKSLYFFGFFEGETGERPPWYLTPTITFPIIETWC 301 D+ DGGV K ++ GEG +V GA+V+V+Y G DG + +F F G G +I G+E V +MR GEVA +I P YAYG G+ PV+ + L F+IE+++ G + K+ D +P+ R + IA+DY R E + +G+S Y F +TGERPPW++ P ITF I +C Sbjct: 184 DVTGDGGVEKKLVVPGEGDVVYQGAQVSVQYTGTLEDGTTFDSTRSKSGNFSFELGAGQVIKGWEAGVSTMRKGEVAAFEISPQYAYGRRGMPPVIPGNSTLTFEIELVDFKGGEKEDIKTVADYNPEVARTPEDIAKDYDARLETQEERRKGMS-------LLDRFYIISPFASQTGERPPWWINPNITFVGILAFC 374
BLAST of EWM24621.1 vs. NCBI_GenBank
Match: gi|551583209|ref|XP_005777041.1| (FKBP-type peptidyl-prolyl cis-trans isomerase [Emiliania huxleyi CCMP1516] >gi|485629232|gb|EOD24612.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 117.472 bits (293), Expect = 1.580e-27 Identity = 73/186 (39.25%), Postives = 95/186 (51.08%), Query Frame = 0 Query: 117 MKTIITAGEGPLVTPGAEVAVKYEGRTAD-----GQVLCRGEDFRFLQGDGTMIGGFETAVGSMRVGEVARVQIQPWYAYGSAGVSPVVGPDMPLDFDIEVLEASGNFLNPKSFRDVDPKKLRDAKSIARDYAQRSELRMRNEEGLSNAEKASRWFKSLYFFGFFEGETGERPPWYLTPTITFPII 297 M + G G GA V V YEGR A RG+ F+F GDG +IGG+E V +M GE A + P YAYG+ G+ P++ PD L FD+E+L + +F + R I R Y +R + +EGL+ A W K +Y FGFF G+ ERPPWYL P ITFP I Sbjct: 1 MLETVQPGLGAAPLKGATVEVHYEGRLAATGAPFDSSRSRGKPFKFTLGDGRVIGGWEVGVAAMAPGERATLTCSPQYAYGAKGIPPLIPPDSTLLFDVELLSVEQPAASGGTFAADNAGVPRTPADIQRAYEERMAAKPAAKEGLA---AAVEWLKGVYIFGFFSGKE-ERPPWYLNPLITFPGI 182
BLAST of EWM24621.1 vs. NCBI_GenBank
Match: gi|922858622|gb|KOO26736.1| (peptidyl-prolyl cis-trans isomerase fkbp1a-like protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 110.538 bits (275), Expect = 4.966e-25 Identity = 66/168 (39.29%), Postives = 90/168 (53.57%), Query Frame = 0 Query: 135 VAVKYEGRTAD-GQVL----CRGEDFRFLQGDGTMIGGFETAVGSMRVGEVARVQIQPWYAYGSAGVSPVVGPDMPLDFDIEVLEASGNFLNPKSFRDVDPKKLRDAKSIARDYAQRSELRMRNEEGLSNAEKASRWFKSLYFFGFFEGETGERPPWYLTPTITFPII 297 V V Y GR + G V RG+ F+F G+G +IGG+E V SM+VGE++ + P YAYG+ G+ P++ P L F++E+L + +SF D R +I+ Y + + EGL E W KS+Y FG F T ERPPWYL P ITFP I Sbjct: 2 VEVHYVGRLVETGAVFDSSRARGKTFKFSLGEGKVIGGWEVGVSSMQVGELSEITCSPQYAYGAKGIPPMIPPSATLRFEVELLAIEQSDEEGRSFADDYVDTARTPGAISAAYKSKMATKPTKAEGL---EGLLDWAKSIYIFGLFS-PTAERPPWYLNPLITFPSI 165
BLAST of EWM24621.1 vs. NCBI_GenBank
Match: gi|1210524527|dbj|GAX16785.1| (hypothetical protein FisN_21Hh233 [Fistulifera solaris]) HSP 1 Score: 110.923 bits (276), Expect = 2.408e-24 Identity = 75/195 (38.46%), Postives = 105/195 (53.85%), Query Frame = 0 Query: 110 LLRDGGVMKTIITAGEGPLVTPGAEVAVKYEGRTADGQVLCRGEDFRFLQGDGTMIGGFETAVGSMRVGEVARVQI-QPWYAYGSAGVSPVVGPDMPLDFDIEVLEA---SGNF-LNPKSFRDVDPKKLRDAKSIARDYAQRSELRMRN--EEGLSN-AEKASRWFKSLYFFGFFEGETGERPPWYLTPTITFPI 296 L D ++K +IT G G + G V+Y A+ +V+ R + + GD MI ++ A+ SM +GE A +Q+ P YG+AGV+ VV P+ L+ D+ V A + N + + D P R A I +A R LR + +EG EKA K+ YFFG FEGETGERPPW+L P+ITFPI Sbjct: 43 LTEDSKLLKKVITPGTGEKLNLGDIATVQYTCY-ANSKVIARSPKQKMVVGDTAMIPAWDKALRSMSIGERAVIQVTDPALGYGAAGVTDVVPPNAVLELDLYVTSAQPATANIDFDSLAMADNTP---RTASEIQAAFAARQALRANDVPKEGFEGFLEKA----KNFYFFGLFEGETGERPPWFLRPSITFPI 229
BLAST of EWM24621.1 vs. NCBI_GenBank
Match: gi|1210530986|dbj|GAX10526.1| (hypothetical protein FisN_21Lh233 [Fistulifera solaris]) HSP 1 Score: 110.153 bits (274), Expect = 3.768e-24 Identity = 75/195 (38.46%), Postives = 105/195 (53.85%), Query Frame = 0 Query: 110 LLRDGGVMKTIITAGEGPLVTPGAEVAVKYEGRTADGQVLCRGEDFRFLQGDGTMIGGFETAVGSMRVGEVARVQI-QPWYAYGSAGVSPVVGPDMPLDFDIEVLEA---SGNF-LNPKSFRDVDPKKLRDAKSIARDYAQRSELRMRN--EEGLSN-AEKASRWFKSLYFFGFFEGETGERPPWYLTPTITFPI 296 L D ++K +I G G + G V+Y A+ +V+ R + + GD MI ++ A+ SM +GE A +Q+ P YG+AGV+ VV P+ L+ D+ VL A + N + + D P R A I +A R LR + +EG EKA K+ YFFG FEGETGERPPW+L P+ITFPI Sbjct: 43 LTEDSKLLKKVIAPGTGEKLNLGDIATVQYTCY-ANSKVIARSPKQKMVVGDTAMIPAWDKALRSMSIGERAVIQVTDPALGYGAAGVTDVVPPNALLELDLCVLSAQPATANIDFDSLAMADNTP---RTASEIQAAFAARQALRANDVPKEGFEGFLEKA----KNFYFFGLFEGETGERPPWFLRPSITFPI 229
BLAST of EWM24621.1 vs. NCBI_GenBank
Match: gi|397647634|gb|EJK77789.1| (hypothetical protein THAOC_00357 [Thalassiosira oceanica]) HSP 1 Score: 108.227 bits (269), Expect = 3.046e-23 Identity = 75/204 (36.76%), Postives = 103/204 (50.49%), Query Frame = 0 Query: 115 GVMKTIITAGEGPLVTPGAEVAVKYEGRTADGQV-LCRGEDFRFLQGDGTMIGGFETAVGSMRVGEVARVQIQ-PWYAYGSAGVSPVVGPDMPLDFDIEVLE----------ASGNFLNPKSF-RDVDPKKLRDAKSIARDYAQRSELRMRN----EEGLSNAEKASRWFKSLYFFGFFEGETGERPPWYLTPTITFPIIETWC 301 G+ KTI+T G G V G + +KY A R E R + GDGT + GF+ A+ SMR GE A V I P Y YG AGV P V P+ ++ D+E+L+ +G+ + D + R +IA Y QR + + + +EGL E ++ YFFG FEGETG+ PWYL P++TFPI C Sbjct: 62 GITKTIVTEGTGRSVRVGDVLILKYFCNAAGSDTAFARSERQRVMVGDGTFVPGFDAALRSMREGERAAVTISDPRYGYGEAGVPPFVLPNSQIEMDLEILDVEDAVGLSAAGTGDLAGLEGMGMDGPVSRPRTPAAIAAAYEQRMKQKAIDAPPEKEGL---EWVVDKIRTSYFFGLFEGETGQEAPWYLKPSVTFPIAFLIC 262
BLAST of EWM24621.1 vs. NCBI_GenBank
Match: gi|544211355|ref|XP_005536077.1| (similar to FKBP-type peptidyl-prolyl cis-trans isomerase [Cyanidioschyzon merolae strain 10D] >gi|449016389|dbj|BAM79791.1| similar to FKBP-type peptidyl-prolyl cis-trans isomerase [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 107.842 bits (268), Expect = 1.781e-22 Identity = 77/210 (36.67%), Postives = 112/210 (53.33%), Query Frame = 0 Query: 109 DLLRDGGVMKTIITAG--------EGPL-VTPGAEVAVKYEGRTAD-GQVLC----RGEDFRFLQGDGTMIGGFETAVGSMRVGEVARVQIQPWYAYGSAGVSPVVGPDMPLDFDIEVLE----ASGN--FLNPKSFRDVDPKKL-RDAKSIARDYAQRSELRMRNEEGLSNAEKASRWFKSLYFFGFFEGETGERPPWYLTPTITFPII 297 DL DGGV++ +++ G + P+ T G+ + V Y G+ A+ GQ+ R E F F+ G+G++I G+E + + G+V R+ P YAYG GV PV+ P L+F++EVLE A GN + S R +D + R + I+R Y +R E R +N +K S+WF F TGERPPW+L P ITF II Sbjct: 189 DLTGDGGVLRELLSRGAPEKAANKQTPVQSTSGSRLRVHYVGKLAETGQIFDASRERQEPFEFILGEGSVIKGWEAGLVGLAAGDVVRLVCAPAYAYGLRGVPPVIPPRAKLEFEVEVLEVLPAAPGNSEAQSKSSLRALDEDDVPRTPEDISRAYIKRLEERA------ANPKKESKWF----IISPFASATGERPPWWLNPNITFLII 388 The following BLAST results are available for this feature:
BLAST of EWM24621.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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