EWM24629.1, cds6040 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24629.1 vs. NCBI_GenBank
Match: gi|585106149|gb|EWM24629.1| (hypothetical protein Naga_100117g18 [Nannochloropsis gaditana]) HSP 1 Score: 1136.32 bits (2938), Expect = 0.000e+0 Identity = 556/556 (100.00%), Postives = 556/556 (100.00%), Query Frame = 0
Query: 1 MSKNPSIQDFQSRTFSIRQDSKQARNLESLRTSGSILSPVKPASIRRLRLVSKRAIQDRDDFHILLFGSFCLCFNASFVNLVTFSSYLKLATAHVTGLVARASQTIADGAWQLVYLPISVFLCFLVGSVVGGYTVSHETFYLGRSYGRALLTIALLQGSALVVNKVHVDEGHVQHYYIYVCAVAMGLQNSLTSKYSGNTLRTTHVTGATTDLGIAIGHLLKGRRGDLWKVKLHSTAILGFLVGGVMGRLAYLRFEETALLFNVTIMTVLGLSHLLWISRRKGLSLWKVFKSTTDLKVDMAPAHEPSPNETPTSPAEMREPTSHLASSGTKGTSASVEYSRTISLLALERTSSSRLGDRPISREISASFKAQSSISTSSSAKILSLQSFGDSQESCGVVHRPANRSTSLECISGQSPSPCPTAGTSDIKASYQLPRIPPSGSGGVDQAGAHRQLPSFPSTMSGSPPRVIQVEAEVHEEDEDASLDDSEDVDEYSVGDVAGEVSCDDYDLVRDPLDGRLVEVLVRVHEAAPDEPEPSQSSQQALDGWSQGTRHTHAPE 556
MSKNPSIQDFQSRTFSIRQDSKQARNLESLRTSGSILSPVKPASIRRLRLVSKRAIQDRDDFHILLFGSFCLCFNASFVNLVTFSSYLKLATAHVTGLVARASQTIADGAWQLVYLPISVFLCFLVGSVVGGYTVSHETFYLGRSYGRALLTIALLQGSALVVNKVHVDEGHVQHYYIYVCAVAMGLQNSLTSKYSGNTLRTTHVTGATTDLGIAIGHLLKGRRGDLWKVKLHSTAILGFLVGGVMGRLAYLRFEETALLFNVTIMTVLGLSHLLWISRRKGLSLWKVFKSTTDLKVDMAPAHEPSPNETPTSPAEMREPTSHLASSGTKGTSASVEYSRTISLLALERTSSSRLGDRPISREISASFKAQSSISTSSSAKILSLQSFGDSQESCGVVHRPANRSTSLECISGQSPSPCPTAGTSDIKASYQLPRIPPSGSGGVDQAGAHRQLPSFPSTMSGSPPRVIQVEAEVHEEDEDASLDDSEDVDEYSVGDVAGEVSCDDYDLVRDPLDGRLVEVLVRVHEAAPDEPEPSQSSQQALDGWSQGTRHTHAPE
Sbjct: 1 MSKNPSIQDFQSRTFSIRQDSKQARNLESLRTSGSILSPVKPASIRRLRLVSKRAIQDRDDFHILLFGSFCLCFNASFVNLVTFSSYLKLATAHVTGLVARASQTIADGAWQLVYLPISVFLCFLVGSVVGGYTVSHETFYLGRSYGRALLTIALLQGSALVVNKVHVDEGHVQHYYIYVCAVAMGLQNSLTSKYSGNTLRTTHVTGATTDLGIAIGHLLKGRRGDLWKVKLHSTAILGFLVGGVMGRLAYLRFEETALLFNVTIMTVLGLSHLLWISRRKGLSLWKVFKSTTDLKVDMAPAHEPSPNETPTSPAEMREPTSHLASSGTKGTSASVEYSRTISLLALERTSSSRLGDRPISREISASFKAQSSISTSSSAKILSLQSFGDSQESCGVVHRPANRSTSLECISGQSPSPCPTAGTSDIKASYQLPRIPPSGSGGVDQAGAHRQLPSFPSTMSGSPPRVIQVEAEVHEEDEDASLDDSEDVDEYSVGDVAGEVSCDDYDLVRDPLDGRLVEVLVRVHEAAPDEPEPSQSSQQALDGWSQGTRHTHAPE 556
BLAST of EWM24629.1 vs. NCBI_GenBank
Match: gi|585105203|gb|EWM23918.1| (Protein of unknown function DUF1275 [Nannochloropsis gaditana]) HSP 1 Score: 249.21 bits (635), Expect = 4.051e-72 Identity = 124/272 (45.59%), Postives = 180/272 (66.18%), Query Frame = 0
Query: 26 NLESLRTSGSILSPVKPASIRRLRLVSKRAIQDRDDFHILLFGSFCLCFNASFVNLVTFSSYLKLATAHVTGLVARASQTIADGAWQLVYLPISVFLCFLVGSVVGGYTVSHETFYLGRSYGRALLTIALLQGSALVVNKVHVDEGHVQHYYIYVCAVAMGLQNSLTSKYSGNTLRTTHVTGATTDLGIAIGHLLKGRRGDLWKVKLHSTAILGFLVGGVMGRLAYLRFEETALLFNVTIMTVLGLSHLLWISRRKGLSLWKVFKSTTDLKV 297
N+ + S ++P P ++R + S + +R F ++L SF L NA+F+N++T ++ +A+AHVTGLVARAS A G ++Y + F+ GS G V+ ETFYLGR+YGRAL IA ++G AL+ + D ++I++CA A GLQN LTSK+SGN +RTTH+TGA+TDLGIA+GH+LKGR+G+ WKVKLH A+LGF VGG++G Y RF +ALLFN+ I T L ++H L+I+ +G+S V +S TD+++
Sbjct: 66 NINDVPCPASKVNP--PQGLQRQK-SSYKNPGERPYFKVILTASFVLTINAAFINIITLNTVQAMASAHVTGLVARASYLAATGRMDVLYQYALTWASFVAGSCTSGVIVAQETFYLGRNYGRALFLIAAVEGIALLTEDSYPD----SIFFIWLCAYACGLQNGLTSKFSGNAVRTTHLTGASTDLGIAMGHILKGRQGEWWKVKLHGVAVLGFFVGGILGFFTYRRFRHSALLFNIGITTTLAVAHTLYIAYHEGISPITVLESKTDIRM 330
BLAST of EWM24629.1 vs. NCBI_GenBank
Match: gi|585105557|gb|EWM24177.1| (Protein of unknown function DUF1275 [Nannochloropsis gaditana]) HSP 1 Score: 134.42 bits (337), Expect = 1.548e-31 Identity = 66/135 (48.89%), Postives = 87/135 (64.44%), Query Frame = 0
Query: 65 LLFGSFCLCFNASFVNLVTFSSYLKLATAHVTGLVARASQTIADGAWQLVYLPISVFLCFLVGSVVGGYTVSHETFYLGRSYGRALLTIALLQGSALVVNKVHVDEGHVQH--YYIYVCAVAMGLQNSLTSKYSG 197
+LFGS L NA ++N +T + + +AHVTG+VARAS A+ W + L + + CF+ G+ +GG +SHETFYLGR+Y RAL A +QG ALV+ E H H Y+IY C +AMGLQNSLTSKY G
Sbjct: 186 VLFGSLTLTINAGYINSITLHNLHGIPSAHVTGIVARASNLFAEADWSRMSLYVVAYCCFVSGACMGGLLISHETFYLGRNYARALFLTAAIQGVALVI------ESHWDHSVYFIYACCLAMGLQNSLTSKYRG 314
BLAST of EWM24629.1 vs. NCBI_GenBank
Match: gi|1183424201|gb|ORY48517.1| (DUF1275-domain-containing protein [Rhizoclosmatium globosum]) HSP 1 Score: 127.487 bits (319), Expect = 6.630e-29 Identity = 71/217 (32.72%), Postives = 120/217 (55.30%), Query Frame = 0
Query: 59 RDDFHILLFGSFCLCFNASFVNLVTFSSYLKLATAHVTGLVARASQTIADGAWQLVYLPISVFLCFLVGSVVGGYTVSHETFYLGRSYGRALLTIALLQGSALVVNKVHVDEGHVQHYYIYVCAVAMGLQNSLTSKYSGNTLRTTHVTGATTDLGIAIGHLLK-GRRGDLWKVKLHSTAILGFLVGGVMGRLAYLRFEETALLFNVTIMTVLGLSHL 274
+ +F+ ++FG+ L NA F+N+VT + + +HVTG V+R + +I G L S+ F+ G+ + GY V F LGRSYG ALL +++ + + K + G + A A GLQN++ + YSG +RTTH+TG TD+G +G + ++W++ +H ++ ++VGGV G+LAY E +LLF + + +++L
Sbjct: 6 QKEFNTIVFGACILSANAGFINVVTLAGVFSVTVSHVTGNVSRVAISIFQGDLTTAALVTSILFSFMFGAFISGYMVGDHKFVLGRSYGYALLLESVMLFMSYISLKGELIVGE------WCAAFACGLQNAMATSYSGLVVRTTHMTGIATDIGNILGQACRQDSHAEVWRLYVHVPIMISYMVGGVFGQLAYYFLHEQSLLFPCFLTGITAVTYL 216
BLAST of EWM24629.1 vs. NCBI_GenBank
Match: gi|488861418|ref|WP_002773657.1| (DUF1275 domain-containing protein [Leptonema illini] >gi|373875624|gb|EHQ07618.1| protein of unknown function DUF1275 [Leptonema illini DSM 21528]) HSP 1 Score: 123.635 bits (309), Expect = 1.233e-28 Identity = 81/226 (35.84%), Postives = 122/226 (53.98%), Query Frame = 0
Query: 63 HILLFGSFCLCFNASFVNLVTFSSYLKLATAHVTGLVARASQTIADGAWQLVYLPISVFLCFLVGSVVGGYTVSHETFYLGRSYGRALLT---IALLQGSALVVNKVHVDEGHVQHYYIYVCAVAMGLQNSLTSKYSGNTLRTTHVTGATTDLGIAIGHLLKGRRGDLWKVKLHSTAILGFLVGGVMGRLAYLRFEETALLFNVTIMTVLGLSH-LLWISRRKGLS 284
ILL G+F L F A F+N+V+F A +H TG V R + ++A G + + + LCF++G+ V GY F GR YG L+ + S L+ N V+ + Y+ ++A GLQN++ + YSG +RTTH+TG TDLGI IG +L+ R+ L + L S +LGFL GG +G++ + R AL + + GL + LL I R K ++
Sbjct: 17 QILLPGAFFLSFTAGFINVVSFLGLFHQAISHTTGNVTRLAASVASGKYAEAQTFVLIVLCFMIGASVSGYITHDSQFKPGRRYGVLLMIESAFIIAAASLLLQNSVYGE---------YLLSMACGLQNAMATSYSGAVVRTTHMTGIITDLGILIGQMLRNRKVPLLRFSLFSILLLGFLSGGSIGQVFFQRMGFFALYAPALWLFIAGLIYFLLRIFRWKAIA 233
BLAST of EWM24629.1 vs. NCBI_GenBank
Match: gi|1149601934|gb|OON09143.1| (hypothetical protein BSLG_01749 [Batrachochytrium salamandrivorans]) HSP 1 Score: 120.553 bits (301), Expect = 1.287e-26 Identity = 70/201 (34.83%), Postives = 116/201 (57.71%), Query Frame = 0
Query: 61 DFHILLFGSFCLCFNASFVNLVTFSSYLKLATAHVTGLVARASQTIADGAWQLVYLPISVFLCFLVGSVVGGYTVSHETFYLGRSYGRALLTIALLQGSALVVNKVHVDEGHVQHYYIYVCAVAMGLQNSLTSKYSGNTLRTTHVTGATTDLGIAIGHLLKG-RRGDLWKVKLHSTAILGFLVGGVMGRLAYLRFEETALL 260
+F+ ++ G L NA F+N+V+ + +A +HVTG V+R + +I W+ L +S+ F G+ V G+ V F LG +YG L L+ +AL+V+ + + V + A A GLQN++ + YSG +RTTH+TG TD+G +G + + +LW++K+H+ +LGF++GGV G+ A+L E +LL
Sbjct: 8 EFYTIVAGGVALAANAGFINVVSMAG---VAVSHVTGSVSRVAISIVQHDWETFLLVVSIIASFTFGAFVSGFIVGDNRFKLGANYGLTL----CLESAALLVSFLFLRRELVLGE--WAAAFACGLQNAMVTSYSGLAVRTTHMTGIATDVGNILGQACRADTKAELWRLKVHAPIMLGFILGGVAGQFAWLNLHEYSLL 199
BLAST of EWM24629.1 vs. NCBI_GenBank
Match: gi|1183515385|gb|ORZ38606.1| (putative transmembrane protein, partial [Catenaria anguillulae PL171]) HSP 1 Score: 117.857 bits (294), Expect = 1.597e-26 Identity = 77/222 (34.68%), Postives = 117/222 (52.70%), Query Frame = 0
Query: 61 DFHILLFGSFCLCFNASFVNLVTFSSYLKLATAHVTGLVARASQTIADGAWQLVYLPISVFLCFLVGSVVGGYTVSHETFYLGRSYGRALLTIALLQGSALVVNKVHVDEGHVQHYYIYVCAVAMGLQNSLTSKYSGNTLRTTHVTGATTDLGIAIGHLL-KGRRGDLWKVKLHSTAILGFLVGGVMGRLAYLRFEETALLFNVTIMTVLGLSHLLWISRRK 281
+F+ ++ G L A F+N + +A HVTG + R ++A W + LCF +GS G T+ F LGRSYG AL L++ + LV+ V + GH + A A GLQN+ + YSG LRTTH+TG TTDLGI G ++ + R + WK+K+ +G+LVGG++G L + + A+L I+ + G+ +L W R+
Sbjct: 8 EFYTVVIGGSLLSTLAGFINAAVLTGSFHVAVTHVTGSLTRLGSSLATANWPSAGQVSGLTLCFFLGSATAGATIDSTRFQLGRSYGIAL----LVEAAILVLAWVFFNVGH-PAFGSAAAAYACGLQNAFCTGYSGAVLRTTHMTGITTDLGILFGQIIARNPRVESWKIKVFGPLWIGYLVGGILGTWGTLAWGDNAILVPAVILCMAGVFYLTWGPARE 224
BLAST of EWM24629.1 vs. NCBI_GenBank
Match: gi|740329845|ref|WP_038166665.1| (DUF1275 family protein [Verrucomicrobium sp. BvORR106]) HSP 1 Score: 116.316 bits (290), Expect = 4.636e-26 Identity = 76/214 (35.51%), Postives = 118/214 (55.14%), Query Frame = 0
Query: 68 GSFCLCFNASFVNLVTFSSYLKLATAHVTGLVARASQTIADGAWQLVYLPISVFLCFLVGSVVGGYTVSHETFYLGRSYGRALLTIALLQGSALVVNKVHVDEGHVQHYYIYVCAVAMGLQNSLTSKYSGNTLRTTHVTGATTDLGIAIGHLLKGRRGDLWKVKLHSTAILGFLVGGVMGRLAYLRFEETALLFNVTIMTVLGLSHLLWISRRK 281
G++ L A VN+V F S+ A H+TG + + IA+G +V FL+G+V+ G + T LGR YG AL+ AL+ +A+ + + H D G Y+ + A GLQN++ + YSG+ +RTTH++G TDLGI +GH ++G D ++++ I GF GG+ G LA+ R+ AL F T+ GL + L+ RR+
Sbjct: 12 GAWALAMVAGMVNVVGFLSFEHQAVTHLTGTTSMLAAAIAEGNTSGALHLAAVAGSFLLGAVLSGMIIQDSTLKLGRRYGVALVLEALMLAAAVPLLQAHRDAG------AYLASCACGLQNAMATTYSGSVIRTTHLSGMFTDLGIFLGHAVRGLPVDGRRLRIALLIITGFFCGGIAGALAFHRWSYPALYFPATVTGAAGLGYGLYKLRRE 219
BLAST of EWM24629.1 vs. NCBI_GenBank
Match: gi|655476644|ref|WP_028859454.1| (DUF1275 family protein [Psychrobacter phenylpyruvicus]) HSP 1 Score: 115.546 bits (288), Expect = 7.412e-26 Identity = 74/204 (36.27%), Postives = 109/204 (53.43%), Query Frame = 0
Query: 65 LLFGSFCLCFNASFVNLVTFSSYLKLATAHVTGLVARASQTIADGAWQLVYLPISVFLCFLVGSVVGGYTVSHETFYLGRSYGRALLTIALLQGSALVVNKVHVDEGHVQHYYIYVCAVAMGLQNSLTSKYSGNTLRTTHVTGATTDLGIAIGHLLKGRRGDLWKVKLHSTAILGFLVGGVMGRLAYLRFEETALLFNVTIMTV 268
+L G L F+A VN++ S + L+ +HVTG V+ S IA W ++ + L FL GS++ GY + + LGRSYG AL A L + ++ HV G + + A+A GLQNS+ + YSG +RTTH+TG T+D+G AIG+ L GR + + + F GGV+G Y TA+L V I+ +
Sbjct: 9 ILIGGAVLAFSAGCVNIIALSGFTNLSVSHVTGNVSLFSSAIARFDWSAIFFIGASLLSFLAGSILSGYLIGQRSLKLGRSYGLALFIEASLLFCSFLLFFQHVYWGQL------LAAMACGLQNSMVATYSGAVIRTTHLTGLTSDMGAAIGNWLAGRPVNKMMLGFQTIIWYSFCGGGVVGAFGYFALGYTAMLIPVGIVLI 206
BLAST of EWM24629.1 vs. NCBI_GenBank
Match: gi|656243716|ref|WP_029190346.1| (DUF1275 family protein [Verrucomicrobium spinosum]) HSP 1 Score: 114.775 bits (286), Expect = 1.827e-25 Identity = 76/213 (35.68%), Postives = 117/213 (54.93%), Query Frame = 0
Query: 68 GSFCLCFNASFVNLVTFSSYLKLATAHVTGLVARASQTIADGAWQLVYLPISVFLCFLVGSVVGGYTVSHETFYLGRSYGRALLTIALLQGSALVVNKVHVDEGHVQHYYIYVCAVAMGLQNSLTSKYSGNTLRTTHVTGATTDLGIAIGHLLKGRRGDLWKVKLHSTAILGFLVGGVMGRLAYLRFEETALLFNVTIMTVLGLSHLLWISRR 280
G++ L A VN+V F S+ A H+TG + + IA+G +V FL+G+V+ G + T LGR YG AL+ AL+ +A+ + + H D G Y+ + A GLQN++ + YSG+ +RTTH++G TDLGI +GH ++G D ++++ I GF GG+ G LA+ R+ AL F T+ GL + L+ RR
Sbjct: 12 GAWALAMVAGMVNVVGFLSFEHQAVTHLTGTTSMLAAAIAEGRLSGALHLAAVAGSFLLGAVLSGMIIQDSTLKLGRRYGVALVMEALMLAAAVPLLQAHHDAG------AYLASCACGLQNAMATTYSGSVIRTTHLSGMFTDLGIFLGHAVRGLPVDGRRLRIALLIITGFFCGGITGALAFHRWSYPALYFPATMTGAAGLGYGLYKLRR 218 The following BLAST results are available for this feature:
BLAST of EWM24629.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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