EWM24655.1, cds6038 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24655.1 vs. NCBI_GenBank
Match: gi|585106177|gb|EWM24655.1| (gag-pol polyprotein [Nannochloropsis gaditana]) HSP 1 Score: 954.51 bits (2466), Expect = 0.000e+0 Identity = 458/458 (100.00%), Postives = 458/458 (100.00%), Query Frame = 0
Query: 1 MKNGTWELTPLPKGERCISSGWVETDKRDQNGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASITTIRLVLALACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEILVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYAFTLSHGEIVNTIDWRAKQQEVVALSSAESELISACSATQSALYIRQLLMDLGLKQDEPTLIMEDNQACIAMGNNPITHKRTKHIDVRKTTGLASTSVFGCL 458
MKNGTWELTPLPKGERCISSGWVETDKRDQNGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASITTIRLVLALACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEILVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYAFTLSHGEIVNTIDWRAKQQEVVALSSAESELISACSATQSALYIRQLLMDLGLKQDEPTLIMEDNQACIAMGNNPITHKRTKHIDVRKTTGLASTSVFGCL
Sbjct: 1 MKNGTWELTPLPKGERCISSGWVETDKRDQNGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASITTIRLVLALACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEILVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYAFTLSHGEIVNTIDWRAKQQEVVALSSAESELISACSATQSALYIRQLLMDLGLKQDEPTLIMEDNQACIAMGNNPITHKRTKHIDVRKTTGLASTSVFGCL 458
BLAST of EWM24655.1 vs. NCBI_GenBank
Match: gi|585100661|gb|EWM20779.1| (gag-pol polyprotein [Nannochloropsis gaditana]) HSP 1 Score: 865.529 bits (2235), Expect = 0.000e+0 Identity = 411/444 (92.57%), Postives = 431/444 (97.07%), Query Frame = 0
Query: 1 MKNGTWELTPLPKGERCISSGWVETDKRDQNGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASITTIRLVLALACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEILVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYAFTLSHGEIVNTIDWRAKQQEVVALSSAESELISACSATQSALYIRQLLMDLGLKQDEPTLIMEDNQACIAMGNNPITHKRTKHIDVR 444
MKNGTWELT LPKGERCISSGWV++DKRDQNGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASITTIRL+LA+ACILDLELDNMDVE AYLQSDLEEKVYVKQP GYEQYG NGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGE+LVIVLYVDDLIITSNSREMV KFK AISREFSMKDLKELDWILGMAIKR+R KRVMEISQTAYIDM+L KF MADC+PVLTPMEGTLTKMDGKD KPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTR+VG++YTGN+TGSFTLVG+ADADYAGDKDNRRSTSGYAFTLSHG+ +NTIDW+AKQQEVVALSSAESELISACSATQSA+YIRQLL DLG KQDEPT+I+EDNQACIAMGNNPITHK+TKHIDVR
Sbjct: 230 MKNGTWELTTLPKGERCISSGWVDSDKRDQNGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASITTIRLILAIACILDLELDNMDVETAYLQSDLEEKVYVKQPIGYEQYGLNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEMLVIVLYVDDLIITSNSREMVDKFKQAISREFSMKDLKELDWILGMAIKRNREKRVMEISQTAYIDMVLNKFGMADCRPVLTPMEGTLTKMDGKDAKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTRDVGIRYTGNTTGSFTLVGFADADYAGDKDNRRSTSGYAFTLSHGDDINTIDWKAKQQEVVALSSAESELISACSATQSAVYIRQLLTDLGFKQDEPTVIVEDNQACIAMGNNPITHKKTKHIDVR 673
BLAST of EWM24655.1 vs. NCBI_GenBank
Match: gi|585099624|gb|EWM20200.1| (gag-pol polyprotein [Nannochloropsis gaditana]) HSP 1 Score: 865.529 bits (2235), Expect = 0.000e+0 Identity = 410/444 (92.34%), Postives = 425/444 (95.72%), Query Frame = 0
Query: 1 MKNGTWELTPLPKGERCISSGWVETDKRDQNGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASITTIRLVLALACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEILVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYAFTLSHGEIVNTIDWRAKQQEVVALSSAESELISACSATQSALYIRQLLMDLGLKQDEPTLIMEDNQACIAMGNNPITHKRTKHIDVR 444
MKNGTWELT LPKGERCISSGWVETDKRDQNG+IVRRKARFIAKGYSQE GYDYLHTYAPVASITTIRL+LA+ACILDLELDNMDVE AYLQSDLEEKVYVKQPPGYEQYGS+GEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSS EILVIVLYVDDLIITSNSR M KFK ISREFSMKDLKELDWILGMAIKR+R KR+MEISQT YIDMML KF M DCKPVLTPMEGTLTKMDGKDVKPD+EYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGY FTLSHG+ +NTIDW+AKQQ+VVALSSAESELISACSATQ+A+YIRQLLMDLG KQDE T+IMEDNQACIA+ NNPITHKRTKHIDVR
Sbjct: 190 MKNGTWELTTLPKGERCISSGWVETDKRDQNGIIVRRKARFIAKGYSQELGYDYLHTYAPVASITTIRLILAIACILDLELDNMDVETAYLQSDLEEKVYVKQPPGYEQYGSDGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSSEILVIVLYVDDLIITSNSRAMTDKFKQDISREFSMKDLKELDWILGMAIKRNREKRIMEISQTGYIDMMLNKFGMTDCKPVLTPMEGTLTKMDGKDVKPDDEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYTFTLSHGDDINTIDWKAKQQDVVALSSAESELISACSATQNAVYIRQLLMDLGFKQDEATVIMEDNQACIALSNNPITHKRTKHIDVR 633
BLAST of EWM24655.1 vs. NCBI_GenBank
Match: gi|585100770|gb|EWM20840.1| (gag-pol polyprotein [Nannochloropsis gaditana]) HSP 1 Score: 855.514 bits (2209), Expect = 0.000e+0 Identity = 406/444 (91.44%), Postives = 426/444 (95.95%), Query Frame = 0
Query: 1 MKNGTWELTPLPKGERCISSGWVETDKRDQNGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASITTIRLVLALACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEILVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYAFTLSHGEIVNTIDWRAKQQEVVALSSAESELISACSATQSALYIRQLLMDLGLKQDEPTLIMEDNQACIAMGNNPITHKRTKHIDVR 444
MKNGTWELTPLPKGERCISSGWVETDKRDQNGVIVRRKARFIAKGYSQE+GYDYL TYAPVAS+TTIRLVLALACILDLELDNMDV+ AYLQSDLEEKVY+KQP GYE+YG NG ELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGE+LV+VLYVDDLII SNSR M KFK AISREFSMKDLKELDWILGMAIKR+R KR+MEISQT YIDMML KF M DCKPVLTPMEGTLTKMDGKDVKPD+EYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTR+VG++YTGN+TGSFTLVG+ADADYAGDKDNRRSTSGYAFTLSHG+ +NTIDW+AKQQEVVALSSAESELISACSATQSA+YIRQLL DLG KQDEPT+IMEDNQACIAMGNNPITHKRTKHIDVR
Sbjct: 519 MKNGTWELTPLPKGERCISSGWVETDKRDQNGVIVRRKARFIAKGYSQEYGYDYLQTYAPVASMTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPHGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEMLVVVLYVDDLIIASNSRTMADKFKQAISREFSMKDLKELDWILGMAIKRNREKRIMEISQTGYIDMMLNKFGMTDCKPVLTPMEGTLTKMDGKDVKPDSEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTRDVGIRYTGNTTGSFTLVGFADADYAGDKDNRRSTSGYAFTLSHGDDINTIDWKAKQQEVVALSSAESELISACSATQSAVYIRQLLTDLGFKQDEPTVIMEDNQACIAMGNNPITHKRTKHIDVR 962
BLAST of EWM24655.1 vs. NCBI_GenBank
Match: gi|585099867|gb|EWM20346.1| (gag-pol polyprotein [Nannochloropsis gaditana]) HSP 1 Score: 850.507 bits (2196), Expect = 0.000e+0 Identity = 406/444 (91.44%), Postives = 419/444 (94.37%), Query Frame = 0
Query: 1 MKNGTWELTPLPKGERCISSGWVETDKRDQNGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASITTIRLVLALACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEILVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYAFTLSHGEIVNTIDWRAKQQEVVALSSAESELISACSATQSALYIRQLLMDLGLKQDEPTLIMEDNQACIAMGNNPITHKRTKHIDVR 444
MKNGTWELTPLPKGERCISSGWVETDKRDQ GVIVRRKARFIAKGYSQEFGYDYLHTYAPVAS+TTIRLVLALACILDLELDNMDV+ AYLQSDLEEKVY+KQPPGYE+YG NG ELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYG HPS ADPCLYVKF SSGEILVIVLYVDDLII SNSR M KFK ISREFSMKDLKELDWILGM IKR+R R MEISQT YI MML KF MADCK VLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSN+EHWIAAKRVLRYLKGTR+VGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGY FTLSHG+ VNTIDW+AKQQ+VVALSSAESELISACSATQ+A+YIRQLLMDLG KQDEPT+IMEDNQACIAMGNNPITHKRTKHIDVR
Sbjct: 221 MKNGTWELTPLPKGERCISSGWVETDKRDQKGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASMTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEILVIVLYVDDLIIGSNSRTMTDKFKQDISREFSMKDLKELDWILGMGIKRNRENRTMEISQTGYIGMMLNKFGMADCKSVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNKEHWIAAKRVLRYLKGTRDVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYTFTLSHGDDVNTIDWKAKQQDVVALSSAESELISACSATQNAVYIRQLLMDLGFKQDEPTVIMEDNQACIAMGNNPITHKRTKHIDVR 664
BLAST of EWM24655.1 vs. NCBI_GenBank
Match: gi|585108508|gb|EWM26459.1| (gag-pol polyprotein [Nannochloropsis gaditana]) HSP 1 Score: 836.254 bits (2159), Expect = 0.000e+0 Identity = 400/444 (90.09%), Postives = 418/444 (94.14%), Query Frame = 0
Query: 1 MKNGTWELTPLPKGERCISSGWVETDKRDQNGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASITTIRLVLALACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEILVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYAFTLSHGEIVNTIDWRAKQQEVVALSSAESELISACSATQSALYIRQLLMDLGLKQDEPTLIMEDNQACIAMGNNPITHKRTKHIDVR 444
MKNGTWELTPLPKGERCISSGWV++DKRDQNG+IVRRKARFIAKGYSQEFGYDYLHTYAPVASITTIRL+LALACILDLELDNMDVE AYLQSDLEEKVYVKQP GYEQ+G +GEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEILVIVLYVDDLIITSNSREMV KFK AISREFSMKDLKELDWILGMAIKRDR KR MEISQTAYIDM+L KF MADC+PVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTR+VG++YTGNSTGSFTLVG+ADADYAGDKDNRRSTSGY FTLSHG+ VNTIDW+AKQQ+VVALSSAES+ A+YIRQLL DLG KQDEPT+IMEDNQACIAM NNPIT RTKHIDVR
Sbjct: 337 MKNGTWELTPLPKGERCISSGWVDSDKRDQNGIIVRRKARFIAKGYSQEFGYDYLHTYAPVASITTIRLILALACILDLELDNMDVETAYLQSDLEEKVYVKQPTGYEQHGPDGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEILVIVLYVDDLIITSNSREMVDKFKQAISREFSMKDLKELDWILGMAIKRDREKRAMEISQTAYIDMVLNKFGMADCRPVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTRDVGIRYTGNSTGSFTLVGFADADYAGDKDNRRSTSGYTFTLSHGDDVNTIDWKAKQQDVVALSSAESD----------AVYIRQLLTDLGFKQDEPTIIMEDNQACIAMSNNPITQSRTKHIDVR 770
BLAST of EWM24655.1 vs. NCBI_GenBank
Match: gi|585100512|gb|EWM20690.1| (gag-pol polyprotein [Nannochloropsis gaditana]) HSP 1 Score: 829.321 bits (2141), Expect = 0.000e+0 Identity = 402/444 (90.54%), Postives = 413/444 (93.02%), Query Frame = 0
Query: 1 MKNGTWELTPLPKGERCISSGWVETDKRDQNGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASITTIRLVLALACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEILVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYAFTLSHGEIVNTIDWRAKQQEVVALSSAESELISACSATQSALYIRQLLMDLGLKQDEPTLIMEDNQACIAMGNNPITHKRTKHIDVR 444
MKNGTWELTPLPKGERCISSGWV++DKRDQNGVIVRRKARFIAKGYSQEFGYDYL+TYAPVASITTIRL+LA+ACILDLELDNMDVE AYLQSDLEEKVYVKQP GYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEILVIVLYVDDLIITSNSREMV KFKHAISREFSMKDLKELDWILGMAIKRDR KRVMEISQTAYIDMMLAKF MADCKPVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRY K VG+ADADYAGDKDNRRSTSGY FTLSHG+ VNTIDW+AKQQEVVALSSAESELISACSATQSA+YIRQLL DLG KQDE T+IME+NQACIAM NNPITHKRTKHIDVR
Sbjct: 441 MKNGTWELTPLPKGERCISSGWVDSDKRDQNGVIVRRKARFIAKGYSQEFGYDYLYTYAPVASITTIRLILAIACILDLELDNMDVETAYLQSDLEEKVYVKQPIGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEILVIVLYVDDLIITSNSREMVNKFKHAISREFSMKDLKELDWILGMAIKRDREKRVMEISQTAYIDMMLAKFGMADCKPVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYQK-------------------VGFADADYAGDKDNRRSTSGYTFTLSHGDDVNTIDWKAKQQEVVALSSAESELISACSATQSAVYIRQLLTDLGFKQDEATVIMENNQACIAMSNNPITHKRTKHIDVR 865
BLAST of EWM24655.1 vs. NCBI_GenBank
Match: gi|585099602|gb|EWM20187.1| (gag-pol polyprotein [Nannochloropsis gaditana]) HSP 1 Score: 789.645 bits (2038), Expect = 0.000e+0 Identity = 384/444 (86.49%), Postives = 393/444 (88.51%), Query Frame = 0
Query: 1 MKNGTWELTPLPKGERCISSGWVETDKRDQNGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASITTIRLVLALACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEILVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYAFTLSHGEIVNTIDWRAKQQEVVALSSAESELISACSATQSALYIRQLLMDLGLKQDEPTLIMEDNQACIAMGNNPITHKRTKHIDVR 444
MKNGTWELTPLPKGERCISSGWVE DKRDQNGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASITTIRLVLALACILDLELDNMDV+ AYLQSDLEEKVY+KQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFH SS DPCLYVKFGSSGE+ EMV FKHAISREFSMKDLKEL WILGMAIKRDR KRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFA RVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGY FTLSHG+ +NTIDW+AKQQ+VVALSSAESELISACSATQSA+YIRQLLMDLG KQDEPT+IMEDNQACIAM NNPI KRTKHIDVR
Sbjct: 259 MKNGTWELTPLPKGERCISSGWVEADKRDQNGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASITTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHSSSTDPCLYVKFGSSGEM-----------------EMVNSFKHAISREFSMKDLKELHWILGMAIKRDREKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFA--------------------RVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYTFTLSHGDDINTIDWKAKQQDVVALSSAESELISACSATQSAVYIRQLLMDLGFKQDEPTVIMEDNQACIAMSNNPIIQKRTKHIDVR 665
BLAST of EWM24655.1 vs. NCBI_GenBank
Match: gi|585100658|gb|EWM20777.1| (gag-pol polyprotein [Nannochloropsis gaditana]) HSP 1 Score: 615.92 bits (1587), Expect = 0.000e+0 Identity = 300/361 (83.10%), Postives = 314/361 (86.98%), Query Frame = 0
Query: 84 MDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEILVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYAFTLSHGEIVNTIDWRAKQQEVVALSSAESELISACSATQSALYIRQLLMDLGLKQDEPTLIMEDNQACIAMGNNPITHKRTKHIDVR 444
MDV+ AYLQSDLEEK+YVKQPPGYEQYG NGEELVC L KSLYGLKQSGRNWHKKI GWFRGYGFH SSADPCLYVKF SSGEILVIVLYVDDLII NSR M+ FK AIS+EFSMKDLKELDWILGMAIKR+R KR+ME+S TAY+DMMLAKFRMADCKPVLTPMEGTLTKM+GK +KPD+EYM LVGSLLYAAL TRPD AFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTR YADADYAGDKDNRRSTSGY FTLSHG VNTIDW+AKQQ VVALSSAESELISACSATQSA+YIRQLLMDLG KQ EPT+IMEDNQACIAM NN I KRTKHIDVR
Sbjct: 1 MDVDTAYLQSDLEEKIYVKQPPGYEQYGPNGEELVCLLHKSLYGLKQSGRNWHKKIGGWFRGYGFHSSSADPCLYVKFESSGEILVIVLYVDDLIIAGNSRNMINDFKLAISKEFSMKDLKELDWILGMAIKRNREKRIMEVSHTAYVDMMLAKFRMADCKPVLTPMEGTLTKMNGKGIKPDSEYMTLVGSLLYAALATRPDDAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTR------------------YADADYAGDKDNRRSTSGYTFTLSHGNDVNTIDWKAKQQYVVALSSAESELISACSATQSAVYIRQLLMDLGFKQGEPTVIMEDNQACIAMSNNQIIQKRTKHIDVR 343
BLAST of EWM24655.1 vs. NCBI_GenBank
Match: gi|585099374|gb|EWM20071.1| (gag-pol polyprotein [Nannochloropsis gaditana]) HSP 1 Score: 549.28 bits (1414), Expect = 0.000e+0 Identity = 260/293 (88.74%), Postives = 277/293 (94.54%), Query Frame = 0
Query: 1 MKNGTWELTPLPKGERCISSGWVETDKRDQNGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASITTIRLVLALACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEILVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSL 293
M+NGTW+LTPLPKGERCISSGWVETDKRDQNG+IVRRKARFIAKGYSQE+GYDYL+TYAPVASITTIRL+LA+ACILDLELDNMDV+ AYLQSDLEEK+YVKQPPGYEQ G NGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFH SSADPCLYVKFGSSGE+LVIVLYVDDLII NSR+MV FK AIS+E SMKDLKELDWILGMAIKR+R KR MEISQTAYIDMMLAKF+MADCKPVLTPMEG LTKM+G+ KPD EYMKLVGSLLYAALVTRPDIAFAVQS+
Sbjct: 1 MRNGTWKLTPLPKGERCISSGWVETDKRDQNGIIVRRKARFIAKGYSQEYGYDYLNTYAPVASITTIRLILAIACILDLELDNMDVDTAYLQSDLEEKIYVKQPPGYEQCGPNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHSSSADPCLYVKFGSSGEMLVIVLYVDDLIIAGNSRDMVDDFKQAISKEISMKDLKELDWILGMAIKRNREKRFMEISQTAYIDMMLAKFKMADCKPVLTPMEGILTKMNGEGDKPDREYMKLVGSLLYAALVTRPDIAFAVQSV 293 The following BLAST results are available for this feature:
BLAST of EWM24655.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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