EWM24671.1, cds6037 (CDS) Nannochloropsis gaditana

Overview
NameEWM24671.1
Unique Namecds6037
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:449877..450230 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24671.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100055g2.7355.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:449877..450230 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24671.1 vs. NCBI_GenBank
Match: gi|585106193|gb|EWM24671.1| (hypothetical protein Naga_100055g2 [Nannochloropsis gaditana])

HSP 1 Score: 235.728 bits (600), Expect = 1.537e-78
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 
Query:    1 MEASPRRRGKKPNALQGSPLHPLPRNVTGSTGTSVAVGEEMFPGFDQGETGHHCSVAKTHGRARQDLRCLGGPRVSDGPMARRLRRYWRGEWRQRGEACKGCHRGRGGSKPKGRAGK 117
            MEASPRRRGKKPNALQGSPLHPLPRNVTGSTGTSVAVGEEMFPGFDQGETGHHCSVAKTHGRARQDLRCLGGPRVSDGPMARRLRRYWRGEWRQRGEACKGCHRGRGGSKPKGRAGK
Sbjct:    1 MEASPRRRGKKPNALQGSPLHPLPRNVTGSTGTSVAVGEEMFPGFDQGETGHHCSVAKTHGRARQDLRCLGGPRVSDGPMARRLRRYWRGEWRQRGEACKGCHRGRGGSKPKGRAGK 117
The following BLAST results are available for this feature:
BLAST of EWM24671.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106193|gb|EWM24671.1|1.537e-78100.00hypothetical protein Naga_100055g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6052rna6052Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications