EWM24665.1, cds6013 (CDS) Nannochloropsis gaditana

Overview
NameEWM24665.1
Unique Namecds6013
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:403441..403649 +
Alignment locationCM002467.1:404097..404104 +
Alignment locationCM002467.1:404246..404490 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24665.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100055g26.7349.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:403441..403649 +
CM002467.1supercontigCM002467.1:404097..404104 +
CM002467.1supercontigCM002467.1:404246..404490 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24665.1 vs. NCBI_GenBank
Match: gi|585106187|gb|EWM24665.1| (hypothetical protein Naga_100055g26 [Nannochloropsis gaditana])

HSP 1 Score: 318.931 bits (816), Expect = 2.625e-110
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0 
Query:    1 MLLEGAASSFKESRGSVFCANYCLAIEKKTLHLPALEVPWAARIERGRRASNSQPARVVVKQHLELGEVSCYELVGFPLSYNHDRKAEIESDLTSPVSLPGRGGGSRQDGTQNLERCHWSSLIFEQCARRSYLSASEFTTCHYKEGCNFNSTQ 153
            MLLEGAASSFKESRGSVFCANYCLAIEKKTLHLPALEVPWAARIERGRRASNSQPARVVVKQHLELGEVSCYELVGFPLSYNHDRKAEIESDLTSPVSLPGRGGGSRQDGTQNLERCHWSSLIFEQCARRSYLSASEFTTCHYKEGCNFNSTQ
Sbjct:    1 MLLEGAASSFKESRGSVFCANYCLAIEKKTLHLPALEVPWAARIERGRRASNSQPARVVVKQHLELGEVSCYELVGFPLSYNHDRKAEIESDLTSPVSLPGRGGGSRQDGTQNLERCHWSSLIFEQCARRSYLSASEFTTCHYKEGCNFNSTQ 153
The following BLAST results are available for this feature:
BLAST of EWM24665.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106187|gb|EWM24665.1|2.625e-110100.00hypothetical protein Naga_100055g26 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6028rna6028Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications