EWM30069.1, cds601 (CDS) Nannochloropsis gaditana

Overview
NameEWM30069.1
Unique Namecds601
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1501071..1501165 +
Alignment locationCM002455.1:1501208..1501315 +
Alignment locationCM002455.1:1501412..1501499 +
Alignment locationCM002455.1:1501654..1501719 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30069.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100173g8.4675.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1501071..1501165 +
CM002455.1supercontigCM002455.1:1501208..1501315 +
CM002455.1supercontigCM002455.1:1501412..1501499 +
CM002455.1supercontigCM002455.1:1501654..1501719 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM30069.1 vs. NCBI_GenBank
Match: gi|585112702|gb|EWM30069.1| (hypothetical protein Naga_100173g8 [Nannochloropsis gaditana])

HSP 1 Score: 248.44 bits (633), Expect = 1.632e-83
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 
Query:    1 MTGLSQQVSFDHETPRSWRKMEAIVSQASDAARTTYCSILHNLLSVSVHHKLCGGGGFQPLHKSIHALYLDAYARGKSQSDVDKSILAHLTCHTCREKLMIEFTYLHEITDTWTNSSN 118
            MTGLSQQVSFDHETPRSWRKMEAIVSQASDAARTTYCSILHNLLSVSVHHKLCGGGGFQPLHKSIHALYLDAYARGKSQSDVDKSILAHLTCHTCREKLMIEFTYLHEITDTWTNSSN
Sbjct:    1 MTGLSQQVSFDHETPRSWRKMEAIVSQASDAARTTYCSILHNLLSVSVHHKLCGGGGFQPLHKSIHALYLDAYARGKSQSDVDKSILAHLTCHTCREKLMIEFTYLHEITDTWTNSSN 118
The following BLAST results are available for this feature:
BLAST of EWM30069.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112702|gb|EWM30069.1|1.632e-83100.00hypothetical protein Naga_100173g8 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna601rna601Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications