EWM24676.1, cds5993 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24676.1 vs. NCBI_GenBank
Match: gi|585112192|gb|EWM29620.1| (histone h4 [Nannochloropsis gaditana]) HSP 1 Score: 200.675 bits (509), Expect = 7.783e-65 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
Query: 1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTALDVVYALKRQGRTLYGFGG 103
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTALDVVYALKRQGRTLYGFGG
Sbjct: 23 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTALDVVYALKRQGRTLYGFGG 125
BLAST of EWM24676.1 vs. NCBI_GenBank
Match: gi|298712420|emb|CBJ33198.1| (histone H4 [Ectocarpus siliculosus]) HSP 1 Score: 199.519 bits (506), Expect = 1.252e-64 Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0
Query: 1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTALDVVYALKRQGRTLYGFGG 103
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTA+DVVYALKRQGRTLYGFGG
Sbjct: 4 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 106
BLAST of EWM24676.1 vs. NCBI_GenBank
Match: gi|585106200|gb|EWM24676.1| (histone h4 [Nannochloropsis gaditana]) HSP 1 Score: 199.134 bits (505), Expect = 1.327e-64 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
Query: 1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTALDVVYALKRQGRTLYGFGG 103
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTALDVVYALKRQGRTLYGFGG
Sbjct: 1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTALDVVYALKRQGRTLYGFGG 103
BLAST of EWM24676.1 vs. NCBI_GenBank
Match: gi|901814723|gb|KMZ69092.1| (Histone H4 [Zostera marina]) HSP 1 Score: 199.904 bits (507), Expect = 1.470e-64 Identity = 101/103 (98.06%), Postives = 103/103 (100.00%), Query Frame = 0
Query: 1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTALDVVYALKRQGRTLYGFGG 103
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDSVTYTEHARRKTVTA+DVVYALKRQGRTLYGFGG
Sbjct: 24 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 126
BLAST of EWM24676.1 vs. NCBI_GenBank
Match: gi|301115051|ref|XP_002999295.1| (histone H4 [Phytophthora infestans T30-4] >gi|301116579|ref|XP_002906018.1| histone H4 [Phytophthora infestans T30-4] >gi|301117770|ref|XP_002906613.1| histone H4 [Phytophthora infestans T30-4] >gi|673019324|ref|XP_008863623.1| histone H4 [Aphanomyces invadans] >gi|673021864|ref|XP_008864893.1| histone H4 [Aphanomyces invadans] >gi|673029806|ref|XP_008868864.1| histone H4 [Aphanomyces invadans] >gi|673039681|ref|XP_008873801.1| histone H4 [Aphanomyces invadans] >gi|675167001|ref|XP_008892385.1| histone H4 [Phytophthora parasitica INRA-310] >gi|675189505|ref|XP_008903637.1| histone H4 [Phytophthora parasitica INRA-310] >gi|676378821|ref|XP_009032689.1| hypothetical protein AURANDRAFT_19438 [Aureococcus anophagefferens] >gi|676381833|ref|XP_009034195.1| hypothetical protein AURANDRAFT_59898 [Aureococcus anophagefferens] >gi|676382303|ref|XP_009034430.1| hypothetical protein AURANDRAFT_21960 [Aureococcus anophagefferens] >gi|676382613|ref|XP_009034585.1| hypothetical protein AURANDRAFT_59915 [Aureococcus anophagefferens] >gi|676385705|ref|XP_009036131.1| hypothetical protein AURANDRAFT_60044 [Aureococcus anophagefferens] >gi|676395753|ref|XP_009041154.1| hypothetical protein AURANDRAFT_60329 [Aureococcus anophagefferens] >gi|676396661|ref|XP_009041608.1| hypothetical protein AURANDRAFT_60352 [Aureococcus anophagefferens] >gi|676397607|ref|XP_009042081.1| hypothetical protein AURANDRAFT_60370 [Aureococcus anophagefferens] >gi|695375990|ref|XP_009515675.1| hypothetical protein PHYSODRAFT_284259 [Phytophthora sojae] >gi|695394750|ref|XP_009520978.1| hypothetical protein PHYSODRAFT_285108 [Phytophthora sojae] >gi|698785787|ref|XP_009825937.1| histone H4 [Aphanomyces astaci] >gi|698788186|ref|XP_009827125.1| histone H4 [Aphanomyces astaci] >gi|698803632|ref|XP_009834845.1| histone H4 [Aphanomyces astaci] >gi|698825697|ref|XP_009845877.1| histone H4 [Aphanomyces astaci] >gi|262107962|gb|EEY66014.1| histone H4 [Phytophthora infestans T30-4] >gi|262109318|gb|EEY67370.1| histone H4 [Phytophthora infestans T30-4] >gi|262111389|gb|EEY69441.1| histone H4 [Phytophthora infestans T30-4] >gi|298710646|emb|CBJ32073.1| histone H4 [Ectocarpus siliculosus] >gi|298710654|emb|CBJ32081.1| histone H4 [Ectocarpus siliculosus] >gi|298713698|emb|CBJ48889.1| histone H4 [Ectocarpus siliculosus] >gi|298713699|emb|CBJ48890.1| histone H4 [Ectocarpus siliculosus] >gi|299473058|emb|CBN77451.1| histone H4 [Ectocarpus siliculosus] >gi|299473063|emb|CBN77456.1| histone H4 [Ectocarpus siliculosus] >gi|299473066|emb|CBN77459.1| histone H4 [Ectocarpus siliculosus] >gi|323447300|gb|EGB03228.1| hypothetical protein AURANDRAFT_60370 [Aureococcus anophagefferens] >gi|323447769|gb|EGB03679.1| hypothetical protein AURANDRAFT_60352 [Aureococcus anophagefferens] >gi|323448267|gb|EGB04168.1| hypothetical protein AURANDRAFT_60329 [Aureococcus anophagefferens] >gi|323453130|gb|EGB09002.1| hypothetical protein AURANDRAFT_60044 [Aureococcus anophagefferens] >gi|323454716|gb|EGB10585.1| hypothetical protein AURANDRAFT_59898 [Aureococcus anophagefferens] >gi|323454982|gb|EGB10851.1| hypothetical protein AURANDRAFT_21960 [Aureococcus anophagefferens] >gi|323455157|gb|EGB11026.1| hypothetical protein AURANDRAFT_59915 [Aureococcus anophagefferens] >gi|323457222|gb|EGB13088.1| hypothetical protein AURANDRAFT_19438 [Aureococcus anophagefferens] >gi|348685875|gb|EGZ25690.1| hypothetical protein PHYSODRAFT_285108 [Phytophthora sojae] >gi|348688586|gb|EGZ28400.1| hypothetical protein PHYSODRAFT_284259 [Phytophthora sojae] >gi|566026128|gb|ETI49039.1| histone H4 [Phytophthora parasitica P1569] >gi|566026523|gb|ETI49434.1| histone H4 [Phytophthora parasitica P1569] >gi|567963408|gb|ETK88907.1| histone H4 [Phytophthora parasitica] >gi|567963819|gb|ETK89312.1| histone H4 [Phytophthora parasitica] >gi|567992106|gb|ETL42305.1| histone H4 [Phytophthora parasitica] >gi|567992576|gb|ETL42766.1| histone H4 [Phytophthora parasitica] >gi|568021389|gb|ETL95479.1| histone H4 [Phytophthora parasitica] >gi|568021832|gb|ETL95915.1| histone H4 [Phytophthora parasitica] >gi|568051779|gb|ETM48678.1| histone H4 [Phytophthora parasitica] >gi|568052197|gb|ETM49079.1| histone H4 [Phytophthora parasitica] >gi|568096404|gb|ETN11155.1| histone H4 [Phytophthora parasitica INRA-310] >gi|568108565|gb|ETN23189.1| histone H4 [Phytophthora parasitica INRA-310] >gi|570329829|gb|ETO77777.1| histone H4 [Phytophthora parasitica P1976] >gi|570330221|gb|ETO78169.1| histone H4 [Phytophthora parasitica P1976] >gi|570953549|gb|ETP18806.1| histone H4 [Phytophthora parasitica CJ01A1] >gi|570953950|gb|ETP19207.1| histone H4 [Phytophthora parasitica CJ01A1] >gi|570988260|gb|ETP46727.1| histone H4 [Phytophthora parasitica P10297] >gi|570988831|gb|ETP47136.1| histone H4 [Phytophthora parasitica P10297] >gi|574099000|gb|ETV64644.1| histone H4 [Aphanomyces astaci] >gi|574110214|gb|ETV75714.1| histone H4 [Aphanomyces astaci] >gi|574118214|gb|ETV83695.1| histone H4 [Aphanomyces astaci] >gi|574118765|gb|ETV84245.1| histone H4 [Aphanomyces astaci] >gi|574470582|gb|ETV97592.1| histone H4 [Aphanomyces invadans] >gi|574475259|gb|ETW02259.1| histone H4 [Aphanomyces invadans] >gi|574479824|gb|ETW06818.1| histone H4 [Aphanomyces invadans] >gi|574480537|gb|ETW07530.1| histone H4 [Aphanomyces invadans] >gi|635367176|emb|CCI44586.1| unnamed protein product [Albugo candida] >gi|635371604|emb|CCI40314.1| unnamed protein product [Albugo candida] >gi|953499224|emb|CEG39536.1| histone [Plasmopara halstedii] >gi|970628031|gb|KUF75792.1| Histone H4 [Phytophthora nicotianae] >gi|970630403|gb|KUF77363.1| Histone H4 [Phytophthora nicotianae] >gi|970661797|gb|KUF99234.1| hypothetical protein AM588_10011316 [Phytophthora nicotianae] >gi|970664205|gb|KUG01184.1| Histone H4 [Phytophthora nicotianae] >gi|1214707300|gb|OWZ18723.1| Histone H4.3 [Phytophthora megakarya] >gi|1214709934|gb|OWZ21070.1| Histone H4.3 [Phytophthora megakarya] >gi|1214713856|gb|OWZ24735.1| Histone H4 [Phytophthora megakarya]) HSP 1 Score: 198.749 bits (504), Expect = 2.223e-64 Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0
Query: 1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTALDVVYALKRQGRTLYGFGG 103
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTA+DVVYALKRQGRTLYGFGG
Sbjct: 1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
BLAST of EWM24676.1 vs. NCBI_GenBank
Match: gi|1021027134|gb|KZM84921.1| (hypothetical protein DCAR_027657 [Daucus carota subsp. sativus]) HSP 1 Score: 199.519 bits (506), Expect = 2.800e-64 Identity = 100/103 (97.09%), Postives = 103/103 (100.00%), Query Frame = 0
Query: 1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTALDVVYALKRQGRTLYGFGG 103
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTA+DVVYALKRQGRTLYGFGG
Sbjct: 1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
BLAST of EWM24676.1 vs. NCBI_GenBank
Match: gi|944261369|gb|KQL25626.1| (hypothetical protein SETIT_032292mg, partial [Setaria italica]) HSP 1 Score: 199.519 bits (506), Expect = 2.961e-64 Identity = 100/103 (97.09%), Postives = 103/103 (100.00%), Query Frame = 0
Query: 1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTALDVVYALKRQGRTLYGFGG 103
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTA+DVVYALKRQGRTLYGFGG
Sbjct: 28 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 130
BLAST of EWM24676.1 vs. NCBI_GenBank
Match: gi|350539093|ref|NP_001234118.1| (histone H4 [Solanum lycopersicum] >gi|350539145|ref|NP_001234121.1| histone H4 [Solanum lycopersicum] >gi|460388245|ref|XP_004239779.1| PREDICTED: histone H4 [Solanum lycopersicum] >gi|460391742|ref|XP_004241478.1| PREDICTED: histone H4 [Solanum lycopersicum] >gi|460411797|ref|XP_004251292.1| PREDICTED: histone H4 [Solanum lycopersicum] >gi|565346063|ref|XP_006340089.1| PREDICTED: histone H4 [Solanum tuberosum] >gi|565395431|ref|XP_006363342.1| PREDICTED: histone H4 [Solanum tuberosum] >gi|565400386|ref|XP_006365711.1| PREDICTED: histone H4 [Solanum tuberosum] >gi|970020842|ref|XP_015071667.1| PREDICTED: histone H4 [Solanum pennellii] >gi|970026921|ref|XP_015074774.1| PREDICTED: histone H4 [Solanum pennellii] >gi|970031503|ref|XP_015077040.1| PREDICTED: histone H4 [Solanum pennellii] >gi|970037056|ref|XP_015079880.1| PREDICTED: histone H4 [Solanum pennellii] >gi|970037058|ref|XP_015079881.1| PREDICTED: histone H4 [Solanum pennellii] >gi|970059917|ref|XP_015056708.1| PREDICTED: histone H4 [Solanum pennellii] >gi|970060227|ref|XP_015056872.1| PREDICTED: histone H4 [Solanum pennellii] >gi|970060229|ref|XP_015056873.1| PREDICTED: histone H4 [Solanum pennellii] >gi|971579146|ref|XP_015158892.1| PREDICTED: histone H4 [Solanum tuberosum] >gi|1026017722|ref|XP_016537714.1| PREDICTED: histone H4 [Capsicum annuum] >gi|1026055248|ref|XP_016572155.1| PREDICTED: histone H4 [Capsicum annuum] >gi|1026063005|ref|XP_016575869.1| PREDICTED: histone H4 [Capsicum annuum] >gi|1026063007|ref|XP_016575870.1| PREDICTED: histone H4 [Capsicum annuum] >gi|1026063009|ref|XP_016575871.1| PREDICTED: histone H4 [Capsicum annuum] >gi|1026066744|ref|XP_016577791.1| PREDICTED: histone H4 [Capsicum annuum] >gi|1026066746|ref|XP_016577792.1| PREDICTED: histone H4 [Capsicum annuum] >gi|1026066748|ref|XP_016577793.1| PREDICTED: histone H4 [Capsicum annuum] >gi|1026098691|ref|XP_016548436.1| PREDICTED: histone H4 [Capsicum annuum] >gi|462243|sp|P35057.2|H4_SOLLC RecName: Full=Histone H4 >gi|51315706|sp|Q6V9I2.3|H4_SOLCH RecName: Full=Histone H4 >gi|51315714|sp|Q71V09.3|H4_CAPAN RecName: Full=Histone H4; AltName: Full=CaH4 >gi|297150|emb|CAA48923.1| histone H4 [Solanum lycopersicum] >gi|297152|emb|CAA48924.1| histone H4 [Solanum lycopersicum] >gi|2746721|gb|AAB94924.1| histone H4 [Capsicum annuum] >gi|33667914|gb|AAQ24536.1| histone H4 [Solanum chacoense] >gi|901796605|gb|KMZ59303.1| Histone H4 [Zostera marina] >gi|901800354|gb|KMZ60562.1| Histone H4 [Zostera marina] >gi|901800359|gb|KMZ60567.1| Histone H4 [Zostera marina] >gi|901801316|gb|KMZ61305.1| Histone H4 [Zostera marina]) HSP 1 Score: 198.364 bits (503), Expect = 3.264e-64 Identity = 101/103 (98.06%), Postives = 103/103 (100.00%), Query Frame = 0
Query: 1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTALDVVYALKRQGRTLYGFGG 103
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDSVTYTEHARRKTVTA+DVVYALKRQGRTLYGFGG
Sbjct: 1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
BLAST of EWM24676.1 vs. NCBI_GenBank
Match: gi|397636964|gb|EJK72475.1| (hypothetical protein THAOC_05990 [Thalassiosira oceanica]) HSP 1 Score: 198.749 bits (504), Expect = 3.293e-64 Identity = 101/103 (98.06%), Postives = 103/103 (100.00%), Query Frame = 0
Query: 1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTALDVVYALKRQGRTLYGFGG 103
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTA+DVVYALKRQG+TLYGFGG
Sbjct: 15 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGKTLYGFGG 117
BLAST of EWM24676.1 vs. NCBI_GenBank
Match: gi|1098756155|ref|XP_018841715.1| (PREDICTED: histone H4-like [Juglans regia]) HSP 1 Score: 198.749 bits (504), Expect = 4.549e-64 Identity = 100/103 (97.09%), Postives = 103/103 (100.00%), Query Frame = 0
Query: 1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTALDVVYALKRQGRTLYGFGG 103
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTA+DVVYALKRQGRTLYGFGG
Sbjct: 25 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 127 The following BLAST results are available for this feature:
BLAST of EWM24676.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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