EWM24692.1, cds5976 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24692.1 vs. NCBI_GenBank
Match: gi|585106220|gb|EWM24692.1| (hypothetical protein Naga_100076g6 [Nannochloropsis gaditana]) HSP 1 Score: 537.339 bits (1383), Expect = 0.000e+0 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0 Query: 1 MPPQRNGSNSLLLLSLLLLALSALSYTPPLFPQRRHAWRTVSVRVPHVARVNGVHSLPPPTSSSCFPLTRRQPVQLASVAEPCCRQLSALRAVEIVDDTSSEDRPEEAPEGTGTFIWFRRWWKKTAKIDRKKLAALGASALCSYGLVSNINYCGTLCASYIIFTKKYNISPFAAGQWKNFLAVYGTLWAAMNFLRPLRVWIALGVTPYFEKIVETIRTKLNVKKSVALGITIFLVNVCGTFSFLGAGLYLSSLYTGVPLIPPRT 264 MPPQRNGSNSLLLLSLLLLALSALSYTPPLFPQRRHAWRTVSVRVPHVARVNGVHSLPPPTSSSCFPLTRRQPVQLASVAEPCCRQLSALRAVEIVDDTSSEDRPEEAPEGTGTFIWFRRWWKKTAKIDRKKLAALGASALCSYGLVSNINYCGTLCASYIIFTKKYNISPFAAGQWKNFLAVYGTLWAAMNFLRPLRVWIALGVTPYFEKIVETIRTKLNVKKSVALGITIFLVNVCGTFSFLGAGLYLSSLYTGVPLIPPRT Sbjct: 1 MPPQRNGSNSLLLLSLLLLALSALSYTPPLFPQRRHAWRTVSVRVPHVARVNGVHSLPPPTSSSCFPLTRRQPVQLASVAEPCCRQLSALRAVEIVDDTSSEDRPEEAPEGTGTFIWFRRWWKKTAKIDRKKLAALGASALCSYGLVSNINYCGTLCASYIIFTKKYNISPFAAGQWKNFLAVYGTLWAAMNFLRPLRVWIALGVTPYFEKIVETIRTKLNVKKSVALGITIFLVNVCGTFSFLGAGLYLSSLYTGVPLIPPRT 264
BLAST of EWM24692.1 vs. NCBI_GenBank
Match: gi|397589951|gb|EJK54857.1| (hypothetical protein THAOC_25476 [Thalassiosira oceanica]) HSP 1 Score: 130.568 bits (327), Expect = 5.012e-33 Identity = 61/132 (46.21%), Postives = 90/132 (68.18%), Query Frame = 0 Query: 130 RKKLAALGASALCSYGLVSNINYCGTLCASYIIFTKKYNISPFAAGQWKNFLAVYGTLWAAMNFLRPLRVWIALGVTPYFEKIVETIRTKLNVKKSVALGITIFLVNVCGTFSFLGAGLYLSSLYTGVPLIP 261 R++L+ LG SAL SYG VSN++Y TL S+ I +K+ +SP A GQWK FLAVYG + N +RPLR ++ V YFE+ V+ I+ K ++ + A+G+ +FL NVCGTF+ +G G++++S GVP+ P Sbjct: 131 RERLSKLGLSALLSYGFVSNMSYAVTLSLSWFIHSKRTGLSPLAEGQWKPFLAVYGGFYVFNNIIRPLRFGASVLVAKYFEQFVKFIQRKSHLSRKWAIGVVVFLANVCGTFAAMGLGVFIASTAAGVPIFP 262
BLAST of EWM24692.1 vs. NCBI_GenBank
Match: gi|1210514058|dbj|GAX26840.1| (hypothetical protein FisN_9Lh115 [Fistulifera solaris]) HSP 1 Score: 122.865 bits (307), Expect = 7.883e-31 Identity = 59/130 (45.38%), Postives = 90/130 (69.23%), Query Frame = 0 Query: 130 RKKLAALGASALCSYGLVSNINYCGTLCASYIIFTKKYNISPFAAGQWKNFLAVYGTLWAAMNFLRPLRVWIALGVTPYFEKIVETIRTKLNVKKSVALGITIFLVNVCGTFSFLGAGLYLSSLYTGVPL 259 R++L LG +A+ SYG VSN++YC ++ ++ IF+K+ SP A GQWK FLAVY + N +RPLR+ +A+GV+P F+ V+ ++ KL V K +A+ IT+ L NV GT SF+ G++L+S+ GVP+ Sbjct: 62 RERLGKLGLAAVLSYGWVSNMSYCVSVSLAWFIFSKQTGKSPLAPGQWKGFLAVYAGFFVFNNIVRPLRLAVAVGVSPKFDAFVKRVQDKLQVGKPLAVTITVILANVVGTISFMCLGIFLASILAGVPV 191
BLAST of EWM24692.1 vs. NCBI_GenBank
Match: gi|1210520833|dbj|GAX20396.1| (hypothetical protein FisN_9Hh115 [Fistulifera solaris]) HSP 1 Score: 121.324 bits (303), Expect = 9.522e-31 Identity = 58/130 (44.62%), Postives = 90/130 (69.23%), Query Frame = 0 Query: 130 RKKLAALGASALCSYGLVSNINYCGTLCASYIIFTKKYNISPFAAGQWKNFLAVYGTLWAAMNFLRPLRVWIALGVTPYFEKIVETIRTKLNVKKSVALGITIFLVNVCGTFSFLGAGLYLSSLYTGVPL 259 R++L +G +A+ SYG VSN++YC ++ ++ IF+K+ SP A GQWK FLAVY + N +RPLR+ +A+GV+P F+ V+ ++ KL V K +A+ IT+ L NV GT SF+ G++L+S+ GVP+ Sbjct: 24 RERLGKMGLAAVLSYGWVSNMSYCVSVSLAWFIFSKQTGKSPLAPGQWKGFLAVYAGFFVFNNIVRPLRLAVAVGVSPKFDAFVKRVQDKLQVGKPLAVTITVILANVVGTISFMCFGIFLASILAGVPI 153
BLAST of EWM24692.1 vs. NCBI_GenBank
Match: gi|1072237744|gb|OEU22471.1| (hypothetical protein FRACYDRAFT_162049, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 119.013 bits (297), Expect = 2.484e-30 Identity = 56/115 (48.70%), Postives = 81/115 (70.43%), Query Frame = 0 Query: 130 RKKLAALGASALCSYGLVSNINYCGTLCASYIIFTKKYNISPFAAGQWKNFLAVYGTLWAAMNFLRPLRVWIALGVTPYFEKIVETIRTKLNVKKSVALGITIFLVNVCGTFSFL 244 R+KLA +G SAL SYG VSN++YC ++ ++ F+KK +SP A GQW FLAVY + N +RP+R+ I++GVTPYF+K V TI+ K K++++GI +FL N+CGT S + Sbjct: 1 RQKLAKMGLSALLSYGFVSNMSYCVSVGLAWFGFSKKTGLSPLAPGQWPKFLAVYAGFYVFNNIVRPIRLAISIGVTPYFDKAVATIQRKTGFNKTLSIGIVVFLANICGTTSLM 115
BLAST of EWM24692.1 vs. NCBI_GenBank
Match: gi|551677122|ref|XP_005841314.1| (hypothetical protein GUITHDRAFT_63464 [Guillardia theta CCMP2712] >gi|428185482|gb|EKX54334.1| hypothetical protein GUITHDRAFT_63464 [Guillardia theta CCMP2712]) HSP 1 Score: 118.242 bits (295), Expect = 1.213e-29 Identity = 56/137 (40.88%), Postives = 88/137 (64.23%), Query Frame = 0 Query: 127 KIDRKKLAALGASALCSYGLVSNINYCGTLCASYIIFTKKYNISPFAAGQWKNFLAVYGTLWAAMNFLRPLRVWIALGVTPYFEKIVETIRTKLNVKKSVALGITIFLVNVCGTFSFLGAGLYLSSLYTGVPLIPPR 263 K++++KL A+G SA +YG VSN+N + S++ F K +SP GQW +FLAVY W A NFLRP R+ +A+ V+P F+K++ + ++L + + A + IFLVNV GT + L GL++++ TG L+P + Sbjct: 3 KVNKEKLTAIGISAALAYGWVSNVNMSLCVILSWVTFGKSCGLSPLDQGQWPSFLAVYAGFWLACNFLRPFRIALAVAVSPAFDKLIHFLESRLGISQQKATFLLIFLVNVVGTLTLLFGGLFVATRLTGTALLPTK 139
BLAST of EWM24692.1 vs. NCBI_GenBank
Match: gi|308810154|ref|XP_003082386.1| (unnamed protein product [Ostreococcus tauri] >gi|116060854|emb|CAL57332.1| unnamed product [Ostreococcus tauri]) HSP 1 Score: 111.694 bits (278), Expect = 5.206e-26 Identity = 76/202 (37.62%), Postives = 102/202 (50.50%), Query Frame = 0 Query: 63 SSCFPLTRRQPVQLASVAEPCCRQLSALRAVEIVDDTSSEDRPEEAPEGTGTFIWFRR---WWKKTAKIDRKKLAALGASALCSYGLVSNINYCGTLCASYIIFTKKYNISPFAAG-QWKNFLAVYGTLWAAMNFLRPLRVWIALGVTPYFEKIVETIRTKL-NVKKSVALGITIFLVNVCGTFSFLGAGLYLSSLYTGVPL 259 +S F T R A A C R+ A RA +T SE EE RR WW+ KID+KK+A+LG++AL SYG VSN+ Y +L + K SP + K F + Y W NFLRP R+ +++ ++P +KIVE R N K A IT+F +NV GTF+++ AG L TGVPL Sbjct: 40 ASSFARTTRD----ARDAFGCHRRPVAARASADASETPSESPSEE--------TLARRVAAWWRAATKIDKKKIASLGSAALLSYGFVSNVFYVSSLMLATYTAVKTTGASPLTSSLSMKTFASSYFGFWMIQNFLRPARMALSVAISPGTDKIVEFFRKYAPNNDKKWAFAITVFCINVVGTFAYMFAGFGLIVALTGVPL 229
BLAST of EWM24692.1 vs. NCBI_GenBank
Match: gi|1199291540|gb|OUS46632.1| (hypothetical protein BE221DRAFT_73989 [Ostreococcus tauri]) HSP 1 Score: 111.309 bits (277), Expect = 5.783e-26 Identity = 70/182 (38.46%), Postives = 95/182 (52.20%), Query Frame = 0 Query: 83 CCRQLSALRAVEIVDDTSSEDRPEEAPEGTGTFIWFRR---WWKKTAKIDRKKLAALGASALCSYGLVSNINYCGTLCASYIIFTKKYNISPFAAG-QWKNFLAVYGTLWAAMNFLRPLRVWIALGVTPYFEKIVETIRTKL-NVKKSVALGITIFLVNVCGTFSFLGAGLYLSSLYTGVPL 259 C R+ A RA +T SE EE RR WW+ KID+KK+A+LG++AL SYG VSN+ Y +L + K SP + K F + Y W NFLRP R+ +++ ++P +KIVE R N K A IT+F +NV GTF+++ AG L TGVPL Sbjct: 56 CHRRPVAARASADASETPSESPSEE--------TLARRVAAWWRAATKIDKKKIASLGSAALLSYGFVSNVFYVSSLMLATYTAVKTTGASPLTSSLSMKTFASSYFGFWMIQNFLRPARMALSVAISPGTDKIVEFFRKYAPNNDKKWAFAITVFCINVVGTFAYMFAGFGLIVALTGVPL 229
BLAST of EWM24692.1 vs. NCBI_GenBank
Match: gi|255089699|ref|XP_002506771.1| (predicted protein [Micromonas commoda] >gi|226522044|gb|ACO68029.1| predicted protein [Micromonas commoda]) HSP 1 Score: 112.079 bits (279), Expect = 8.610e-26 Identity = 60/151 (39.74%), Postives = 88/151 (58.28%), Query Frame = 0 Query: 111 GTGTFIWFRRWWKKTAKIDRKKLAALGASALCSYGLVSNINYCGTLCASYIIFTKKYNISPFA-AGQWKNFLAVYGTLWAAMNFLRPLRVWIALGVTPYFEKIVETIRTKL-NVKKSVALGITIFLVNVCGTFSFLGAGLYLSSLYTGVPL 259 GTG + WW K KID+ +AALG +AL SYGL+SN+ Y +L + K + +SP + F+ Y LW NFLRP R+ +++ ++P+ +KIVE R + KK A +T+F VNV GTF+++ G +L + TGVPL Sbjct: 123 GTGGL---KEWWAKAGKIDKSTIAALGGAALLSYGLISNVFYVSSLLGAMYTSCKVHALSPLVDKAAMQTFVTTYFGLWMIQNFLRPARMGLSVAISPFTDKIVEFFRRYVPGNKKPAAFALTVFCVNVLGTFAYMFGGFFLITWLTGVPL 270
BLAST of EWM24692.1 vs. NCBI_GenBank
Match: gi|397647948|gb|EJK77922.1| (hypothetical protein THAOC_00212 [Thalassiosira oceanica]) HSP 1 Score: 108.612 bits (270), Expect = 8.874e-24 Identity = 50/142 (35.21%), Postives = 88/142 (61.97%), Query Frame = 0 Query: 118 FRRWWKKTAKIDRKKLAALGASALCSYGLVSNINYCGTLCASYIIFTKKYNISPFAAGQWKNFLAVYGTLWAAMNFLRPLRVWIALGVTPYFEKIVETIRTKLNVKKSVALGITIFLVNVCGTFSFLGAGLYLSSLYTGVPL 259 R+++ K +K+DR+ L+ LG SAL +YG VSN++ + +++ IF+K+ +SP GQ F +Y A+N +RP R +++ ++P F+KI + I+ +L V A + I +N+ GT S + AG+ L+S+ +GVP+ Sbjct: 250 LRKFFSKNSKLDREFLSKLGLSALLAYGFVSNVSGVVAVSSAWFIFSKRTGLSPLHPGQKAAFFTMYAGFTLALNVIRPARFALSMAISPTFDKIRKGIQVRLGVGPKTAATLMIIFINLMGTTSLMCAGIGLASMLSGVPI 391 The following BLAST results are available for this feature:
BLAST of EWM24692.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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