EWM24706.1, cds5975 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24706.1 vs. NCBI_GenBank
Match: gi|585106234|gb|EWM24706.1| (hypothetical protein Naga_100076g8 [Nannochloropsis gaditana]) HSP 1 Score: 641.343 bits (1653), Expect = 0.000e+0 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0
Query: 1 MVSRLFLLSITLAAVTACQAFVIRNLPSHGQVRDSKFGASSSKRGGHGRLSMQSSSFSIMQSSPEYALLKESNVLSAKTGRSVALGDVFPTGGKMTIVAFLTHWGDFNSFEYAQKLLHYLPELERANVNVVAVGIGTVAAAQKFASLVGGFPLDRLYADESAASYGKFGFSRGFAADLPVNPYLKLLPMLAGIGSPGTLQAVLAGYVGDKKADASWTGDYLKKEGQGLVDKSAFDVLGREGARPFEVATVRLQNMMAILPNWEALVPPNKQLITQQGGSLVFEGRKLVRVYRDRGILTYTDVEDLLRTVGMARRR 315
MVSRLFLLSITLAAVTACQAFVIRNLPSHGQVRDSKFGASSSKRGGHGRLSMQSSSFSIMQSSPEYALLKESNVLSAKTGRSVALGDVFPTGGKMTIVAFLTHWGDFNSFEYAQKLLHYLPELERANVNVVAVGIGTVAAAQKFASLVGGFPLDRLYADESAASYGKFGFSRGFAADLPVNPYLKLLPMLAGIGSPGTLQAVLAGYVGDKKADASWTGDYLKKEGQGLVDKSAFDVLGREGARPFEVATVRLQNMMAILPNWEALVPPNKQLITQQGGSLVFEGRKLVRVYRDRGILTYTDVEDLLRTVGMARRR
Sbjct: 1 MVSRLFLLSITLAAVTACQAFVIRNLPSHGQVRDSKFGASSSKRGGHGRLSMQSSSFSIMQSSPEYALLKESNVLSAKTGRSVALGDVFPTGGKMTIVAFLTHWGDFNSFEYAQKLLHYLPELERANVNVVAVGIGTVAAAQKFASLVGGFPLDRLYADESAASYGKFGFSRGFAADLPVNPYLKLLPMLAGIGSPGTLQAVLAGYVGDKKADASWTGDYLKKEGQGLVDKSAFDVLGREGARPFEVATVRLQNMMAILPNWEALVPPNKQLITQQGGSLVFEGRKLVRVYRDRGILTYTDVEDLLRTVGMARRR 315
BLAST of EWM24706.1 vs. NCBI_GenBank
Match: gi|298713055|emb|CBJ48830.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 259.225 bits (661), Expect = 1.781e-82 Identity = 135/252 (53.57%), Postives = 173/252 (68.65%), Query Frame = 0
Query: 65 EYALLKESNVLSAKTGRSVALGDVF-PTGGKMTIVAFLTHWGDFNSFEYAQKLLHYLPELERANVNVVAVGIGTVAAAQKFASLVGGFPLDRLYADESAASYGKFGFSRGFAADLP----VNPYLKLLPMLAGIGSPGTLQAVLAGYVGDKKADASWTGDYLKKEGQGLVDKSAFDVLGREGARPFEVATVRLQNMMAILPNWEALVPPNKQLITQQGGSLVFEGRKLVRVYRDRGILTYTDVEDLLRTVGM 311
EY LL+ +V SA +G+ + L + P GK TIVAF TH DFNS+EYAQKL HYLP+++ A V VV V +GTV AA+ F + G FPLD ++ D + +Y GFS GF LP +NPYL+LLPMLAGIGSPGT+QAVL GYVGD ++A W L +VD FD LG G+RP EVAT+RLQNM I+ W L PP+K+LITQQGG++VFEGR + Y+D+GIL YTDV ++L+T+G+
Sbjct: 21 EYELLRGVSVKSASSGKEMDLLSAWEPAPGKKTIVAFFTHTADFNSWEYAQKLRHYLPQIDDAGVGVVGVSLGTVDAARDFCAETG-FPLDNMFMDATGQAYSALGFSNGFEPRLPGDRKINPYLRLLPMLAGIGSPGTIQAVLKGYVGDPNSNADWVSSAL-----SMVDNKEFDFLGTRGSRPLEVATLRLQNMRQIVTKWNKLAPPDKELITQQGGTVVFEGRDKIYNYKDKGILVYTDVLEMLKTIGV 266
BLAST of EWM24706.1 vs. NCBI_GenBank
Match: gi|302834892|ref|XP_002949008.1| (hypothetical protein VOLCADRAFT_89241 [Volvox carteri f. nagariensis] >gi|300265753|gb|EFJ49943.1| hypothetical protein VOLCADRAFT_89241 [Volvox carteri f. nagariensis]) HSP 1 Score: 216.853 bits (551), Expect = 1.490e-65 Identity = 119/251 (47.41%), Postives = 159/251 (63.35%), Query Frame = 0
Query: 59 IMQSSPEYALLKESNVLSAKTGRSVALGDVF-PTGGKMTIVAFLTHWGDFNSFEYAQKLLHYLPELERANVNVVAVGIGTVAAAQKFASLVGGFPLDRLYA-DESAASYGKFGFSRGFAADLPVNPYLKLLPMLAGIGSPGTLQAVLAGYVGDKKADASWTGDYLKKEGQGLVDKSAFDVLGREGARPFEVATVRLQNMMAILPNWEALVPPNKQLITQQGGSLVFEGRKLVRVYRDRGILTYTDVEDLLR 307
+++S EY L+ A +G V L ++ P +++FLTH+ D +S+E+AQKL+ +P LE + V +AVG+G+V AQ+FA + FPLDRLYA E Y + GFS GFA DL VNPYLKL+PMLAG+GSPGT+Q VL GYVGDK A + + FDVLG RPFE+AT+RL NMM ILP W L P + L+TQQGG +VF G ++V + D GIL YTDV+++L+
Sbjct: 30 CVRASAEYEALRGKVAYKASSGDPVELLSLWEPAPTSKAVISFLTHFADLSSWEFAQKLVKVIPTLEGSGVRFLAVGLGSVGNAQEFARTLN-FPLDRLYAMPEGGELYRQLGFSAGFAPDLNVNPYLKLVPMLAGVGSPGTVQEVLRGYVGDKTAKPVFD------------SPTPFDVLGPGYQRPFELATLRLFNMMGILPKWSELCPADPSLLTQQGGCVVFAGEQVVFKHVDSGILRYTDVDEILK 267
BLAST of EWM24706.1 vs. NCBI_GenBank
Match: gi|552834313|ref|XP_005848699.1| (hypothetical protein CHLNCDRAFT_144332 [Chlorella variabilis] >gi|307108357|gb|EFN56597.1| hypothetical protein CHLNCDRAFT_144332 [Chlorella variabilis]) HSP 1 Score: 211.075 bits (536), Expect = 2.043e-63 Identity = 118/242 (48.76%), Postives = 156/242 (64.46%), Query Frame = 0
Query: 65 EYALLKESNVLSAKTGRSVALGDVFPTG-GKMTIVAFLTHWGDFNSFEYAQKLLHYLPELERANVNVVAVGIGTVAAAQKFASLVGGFPLDRLYADESAASYGKFGFSRGFAADLPVNPYLKLLPMLAGIGSPGTLQAVLAGYVGDKKADASWTGDYLKKEGQGLVDKSAFDVLGREGARPFEVATVRLQNMMAILPNWEALVPPNKQLITQQGGSLVFEGRKLVRVYRDRGILTYTDVEDL 305
+Y +L++ VLSA +G VAL ++ G +VA LTH+GD +S E AQKLL LPEL + V V+AVG+G A+KFA L+G FPLD LYAD + A Y FS GFA + ++ Y KLL MLAG+GSPGT+Q VL GYVGD+ A +T G G + FDVLGR RPFE+AT+RL NM +L +W L P +++L+TQQGG L F+GR+ + + D GIL Y D++ L
Sbjct: 23 DYDVLQQHTVLSAASGEEVALTSLWQAQPGTRCVVACLTHFGDLSSTECAQKLLAVLPELRASGVGVLAVGLGEPEKARKFAELLG-FPLDLLYADPTGALYSALAFSPGFAPETRISAYAKLLVMLAGVGSPGTIQEVLRGYVGDRSAKPVFT-SGGGGGGGGGGGGNLFDVLGRGYQRPFELATLRLYNMNLVLSHWNELAPADERLLTQQGGCLAFDGRQTIFRHTDTGILKYADIDAL 262
BLAST of EWM24706.1 vs. NCBI_GenBank
Match: gi|551649662|ref|XP_005827615.1| (hypothetical protein GUITHDRAFT_88647 [Guillardia theta CCMP2712] >gi|428171721|gb|EKX40635.1| hypothetical protein GUITHDRAFT_88647 [Guillardia theta CCMP2712]) HSP 1 Score: 206.068 bits (523), Expect = 4.791e-61 Identity = 119/274 (43.43%), Postives = 159/274 (58.03%), Query Frame = 0
Query: 36 KFGASSSKRGGHGRLSMQSSSFSIMQSSPEYALLKESNVLSAKTGRSVALGDVFPTGGKMTIVAFLTHWGDFNSFEYAQKLLHYLPELERANVNVVAVGIGTVAAAQKFASLVGGFPLDRLYADESAASYGKFGFSRGF-------AADLPVNPYLKLLPMLAGIGSPGTLQAVLAGYVGDKKADASWTGDYLKKEGQG---LVDKSAFDVLGREGARPFEVATVRLQNMMAILPNWEALVPPNKQLITQQGGSLVFEGRKLVRVYRDRGILTY 299
K ASS K R +S S EY LK V + KT + V P+G ++ + FLTH+GD +S+EYA++LLHY+P L V V+A+GIG+ A +KFA + FP + L+ D A+ + GFS GF A P++PYL+LLPML GIGSPGTL V+ GY GD+ D WT +L+ G V+ FD LG RPFE+ATVRLQNM+ IL W L+P N+ L+ QQGG++V EG + + + DRGIL Y
Sbjct: 20 KLTASSPKLTASPRFPRATSHRLCEMSVSEYETLKGLRVKNVKTCEGADI--VSPSGRRLLV--FLTHFGDLSSWEYARQLLHYMPLLHSRGVKVMAIGIGSQEAGKKFADQLK-FPEELLFFDPDASCAAELGFSAGFGRSSARDAQSNPLSPYLRLLPMLLGIGSPGTLGQVIYGYFGDRGYDPKWTVSHLRDFATGSFPFVEPELFDRLGSGYLRPFELATVRLQNMIGILEQWNELIPENQDLVVQQGGTIVMEGDQTIYRFDDRGILVY 288
BLAST of EWM24706.1 vs. NCBI_GenBank
Match: gi|159467230|ref|XP_001691801.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158279147|gb|EDP04909.1| predicted protein [Chlamydomonas reinhardtii]) HSP 1 Score: 205.297 bits (521), Expect = 6.869e-61 Identity = 112/249 (44.98%), Postives = 152/249 (61.04%), Query Frame = 0
Query: 60 MQSSPEYALLKESNVLSAKTGRSVALGDVF-PTGGKMTIVAFLTHWGDFNSFEYAQKLLHYLPELERANVNVVAVGIGTVAAAQKFASLVGGFPLDRLYADESAASYGKFGFSRGFAADLPVNPYLKLLPMLAGIGSPGTLQAVLAGYVGDKKADASWTGDYLKKEGQGLVDKSAFDVLGREGARPFEVATVRLQNMMAILPNWEALVPPNKQLITQQGGSLVFEGRKLVRVYRDRGILTYTDVEDLLR 307
+ +S EY L+ A +G V + ++ P G +V LTH+ D S+E AQKL+ +P LE + V VV +G+G V AQ+FA ++ FP+DRL+A +A Y GF+ GFA L V+PY+KLLPMLAG+GSPGT+Q V+ GYVGD A + + FDVLG RPFE+AT+RL NMM ILP W+ L PP+ L+TQQGG LVF G +V + D GIL YT+ + +L+
Sbjct: 36 VHASAEYEALRGKVAYKASSGDPVEITSMWEPVLGSKAVVVCLTHFADLTSWELAQKLVKIIPTLEGSGVKVVVLGLGNVNNAQEFARILK-FPMDRLFAYPAADLYLDLGFNPGFAPQLQVSPYVKLLPMLAGVGSPGTIQEVVRGYVGDSAAPPVFD------------SPTPFDVLGSGYQRPFELATLRLFNMMGILPKWQELCPPDTGLLTQQGGCLVFSGSSVVFKHVDSGILRYTEPDSILQ 271
BLAST of EWM24706.1 vs. NCBI_GenBank
Match: gi|971511807|dbj|GAQ86414.1| (hypothetical protein KFL_002870180 [Klebsormidium nitens]) HSP 1 Score: 206.068 bits (523), Expect = 1.258e-60 Identity = 121/286 (42.31%), Postives = 168/286 (58.74%), Query Frame = 0
Query: 25 NLPSHGQV---RDSKFGASSSKRGGHGRLSMQSSSFSIMQSSPEYALLKESNVLSAKTGRSVALGDVFPTG-GKMTIVAFLTHWGDFNSFEYAQKLLHYLPELERANVNVVAVGIGTVAAAQKFASLVGGFPLDRLYADESAASYGKFGFSRGFAADLPVNPYLKLLPMLAGIGSPGTLQAVLAGYVGDKKADASWTGDYLKKEGQGLVDKSAFDVLGREGARPFEVATVRLQNMMAILPNWEALVPPNKQLITQQGGSLVFEGRKLVRVYRDRGILTYTDVEDLL 306
+LP Q+ D + G+ + HG +S + +SS +Y LK VL A +G+ V L ++ G ++ F+TH+ D +S+E+AQKL LPEL+ V +VAVG+G+ A++FA VG FPL LYAD + A Y FS GFA + V+PYLKLLPML GIGSPGT+Q V GY GD+ + + G + FD+LG+ RP E+AT+RL NM IL W + PP +L+TQQGGS+VF+G +V + D GIL YTDV+ L+
Sbjct: 68 HLPRKSQLCLGTDLRLGSKRRRSLSHGVSKARSGA---ARSSLDYDALKGVQVLEAASGQPVELLSLWAAKPGVRVVIPFMTHFADLSSWEFAQKLAKKLPELQANGVRIVAVGLGSPDNARRFAETVG-FPLQLLYADPTGACYRALNFSPGFAPEAGVSPYLKLLPMLMGIGSPGTIQEVARGYFGDRGSKPVFEGS------------TPFDILGKGYQRPMELATLRLFNMFGILQKWGEMSPPETRLLTQQGGSIVFDGEDVVFKHVDSGILKYTDVDALV 337
BLAST of EWM24706.1 vs. NCBI_GenBank
Match: gi|545354500|ref|XP_005643084.1| (hypothetical protein COCSUDRAFT_60209 [Coccomyxa subellipsoidea C-169] >gi|384245044|gb|EIE18540.1| hypothetical protein COCSUDRAFT_60209 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 201.06 bits (510), Expect = 1.761e-60 Identity = 107/213 (50.23%), Postives = 138/213 (64.79%), Query Frame = 0
Query: 101 LTHWGDFNSFEYAQKLLHYLPELE----RANVNVVAVGIGTVAAAQKFASLVGGFPLDRLYADESAASYGKFGFSRGFAADLPVNPYLKLLPMLAGIGSPGTLQAVLAGYVGDKKADASWTGDYLKKEGQGLVDKSAFDVLGREGARPFEVATVRLQNMMAILPNWEALVPPNKQLITQQGGSLVFEGRKLVRVYRDRGILTYTDVEDLLRTV 309
+TH+GD +S+E AQKL LP+L+ + V+AVG+G+ A+ FA + FPLD LYAD + A Y GFS GFA D V+PYLKLLPML GIGSPGT+Q VL GY+GD+ A + G + F+VLG RP E+AT+RL NMM ILP W L PP++ L+TQQGGSLVF+G K++ + D GIL YTD++ LL V
Sbjct: 1 MTHFGDLSSWELAQKLKKKLPDLQARQAKLGKKVIAVGLGSTENARAFARALD-FPLDLLYADSTGAVYRALGFSPGFAPDADVSPYLKLLPMLMGIGSPGTIQEVLRGYIGDRSAKPVFEG------------ATPFNVLGGGYQRPLELATLRLSNMMGILPKWSELCPPDESLLTQQGGSLVFQGEKVIFSHTDSGILKYTDLDALLDAV 200
BLAST of EWM24706.1 vs. NCBI_GenBank
Match: gi|926784954|ref|XP_013900951.1| (hypothetical protein MNEG_6027 [Monoraphidium neglectum] >gi|761971321|gb|KIZ01932.1| hypothetical protein MNEG_6027 [Monoraphidium neglectum]) HSP 1 Score: 188.348 bits (477), Expect = 3.511e-54 Identity = 104/225 (46.22%), Postives = 144/225 (64.00%), Query Frame = 0
Query: 93 GKMTIVAFLTHWGDFNSFEYAQKLLHY-LPELERANVNVVAVGIGTVAAAQKFASLVGGFPLDRLYADESAASYGKFGFSRGFAADLP-VNPYLKLLPMLAGIGSPGTLQAVLAGYVGDKKADASWTGDYLKKEGQGLVDKSAFDVLGREGARPFEVATVRLQNMMAILPNWEALVPPNKQLITQQGGSLVFEGRKLVRVYRDRGILTYTDVEDLLRTVGMARRR 315
G +V FLTH+GD S+E+AQKL L L+ A V V++VG+G+ +A+ FA+ + +PL+ LYAD + A GFS GFA + V+PYLKLLPML GIGSPGT+Q VL GYVGD++A + G + AFD+LG+ RP E+AT+RLQNM+ +L W L P K+L+TQQGG +VF+G +V + D GIL Y DV+ +++ A R+
Sbjct: 85 GNRVVVPFLTHFGDLTSWEFAQKLQKKALGPLQEAGVKVISVGLGSPESARTFAAALD-YPLEGLYADPTGACCKALGFSPGFADSVEGVDPYLKLLPMLMGIGSPGTVQEVLRGYVGDREAPPVFDGTLGR----------AFDILGKGYQRPLELATLRLQNMVGVLSKWGDLAPSEKRLLTQQGGCIVFDGCDVVYRHADPGILKYADVDAVVQAATQAPRK 298
BLAST of EWM24706.1 vs. NCBI_GenBank
Match: gi|255075367|ref|XP_002501358.1| (predicted protein, partial [Micromonas commoda] >gi|226516622|gb|ACO62616.1| predicted protein, partial [Micromonas commoda]) HSP 1 Score: 176.792 bits (447), Expect = 4.930e-50 Identity = 111/246 (45.12%), Postives = 146/246 (59.35%), Query Frame = 0
Query: 67 ALLKESNVLSAKTGRSVALGDVFPTGGKMTIVAFLTHWGDFNSFEYAQKLLHYLPELERANVNVVAVGIGTVAAAQKFASLVGGFPLDRLYADESAASYGKFGFSRGFA----------ADLP-VNPYLKLLPMLAGIGSPGTLQAVLAGYVGDKKADASWT--GDYLKKEGQGLVDKSAFDVLGREGARPFEVATVRLQNMMAILPNWEALVPPNKQLITQQGGSLVFEGRKLVRVYRDRGILTY 299
A LK + A G++V + P+ G++ +V FLT + DF+S+E AQKL+ +PEL+ V +VAVGIG+V AA++F+ FPLDRLYADE+AA+Y F+ GF LP VN Y KLL M AGIGSPGTL AV GY+G K D + +Y + L+D + LG RPFE+AT+RL NM IL NWE L P + L+ Q+GGSLVF+ V + D GIL Y
Sbjct: 50 AKLKGVELKRATDGQTVDAASIVPSSGRV-VVPFLTQFADFDSWELAQKLVDDIPELDANGVTLVAVGIGSVEAAKEFSRRTN-FPLDRLYADETAAAYQALDFAPGFGRAGGELGWIGEKLPFVNGYAKLLVMCAGIGSPGTLGAVFGGYIGSKYRDPIFREGSNYDNPTIRKLMDAT----LGGGYQRPFELATLRLTNMTEILSNWEDLAPVDDNLLVQRGGSLVFQDGACVFRHNDAGILGY 289 The following BLAST results are available for this feature:
BLAST of EWM24706.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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