EWM24691.1, cds5960 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24691.1 vs. NCBI_GenBank
Match: gi|585106219|gb|EWM24691.1| (ubiquitin conjugation factor e4 b isoform 2 [Nannochloropsis gaditana]) HSP 1 Score: 1036.56 bits (2679), Expect = 0.000e+0 Identity = 508/508 (100.00%), Postives = 508/508 (100.00%), Query Frame = 0
Query: 1 MTRILFPSPAFPFPSPQEISLLEPDLLDKAMVFVGGAAAWFSSQAFDAAATPDLAAALAFCSRCPEHLLEDLLVLVKFVGRAHPQSLLTAPLAPFFDLCIQALTRPQLVHSPHLRAKIGDLLYLVFLPPEERLDHSSTSAAATRGHSVYTSFLLNNPLAQASLAPALLLLYGDVEHTGFYDKLEHRFHIAAVLKFLWRSPEHRRTFRRISSDTSQFTSFANGLMNETNALVASVMEKLPEIRSVQLQMKDSPAWAAMPEESRNEIMERHNDNERSVSSSLLLCNETIHMLMYLTSDEAVRKPFLAPALSPRLANTLLSIVDKLVGTKGLEIKVENPDALNFKPKEMLREVALTILHFAGEPAFHTALSESGYYHEGMLGKVQQTMKRVGGMSEAQLEACTALETAVASAAEKAEAEDLGVEVPDEFLDPLLCTLMKDPVRLPTSGYAMERAAIEQHLLNQPTDPFNRQPLSLTDLEPLPELKAKIETWVEEQRLSKRKEKEEKEAHGV 508
MTRILFPSPAFPFPSPQEISLLEPDLLDKAMVFVGGAAAWFSSQAFDAAATPDLAAALAFCSRCPEHLLEDLLVLVKFVGRAHPQSLLTAPLAPFFDLCIQALTRPQLVHSPHLRAKIGDLLYLVFLPPEERLDHSSTSAAATRGHSVYTSFLLNNPLAQASLAPALLLLYGDVEHTGFYDKLEHRFHIAAVLKFLWRSPEHRRTFRRISSDTSQFTSFANGLMNETNALVASVMEKLPEIRSVQLQMKDSPAWAAMPEESRNEIMERHNDNERSVSSSLLLCNETIHMLMYLTSDEAVRKPFLAPALSPRLANTLLSIVDKLVGTKGLEIKVENPDALNFKPKEMLREVALTILHFAGEPAFHTALSESGYYHEGMLGKVQQTMKRVGGMSEAQLEACTALETAVASAAEKAEAEDLGVEVPDEFLDPLLCTLMKDPVRLPTSGYAMERAAIEQHLLNQPTDPFNRQPLSLTDLEPLPELKAKIETWVEEQRLSKRKEKEEKEAHGV
Sbjct: 1 MTRILFPSPAFPFPSPQEISLLEPDLLDKAMVFVGGAAAWFSSQAFDAAATPDLAAALAFCSRCPEHLLEDLLVLVKFVGRAHPQSLLTAPLAPFFDLCIQALTRPQLVHSPHLRAKIGDLLYLVFLPPEERLDHSSTSAAATRGHSVYTSFLLNNPLAQASLAPALLLLYGDVEHTGFYDKLEHRFHIAAVLKFLWRSPEHRRTFRRISSDTSQFTSFANGLMNETNALVASVMEKLPEIRSVQLQMKDSPAWAAMPEESRNEIMERHNDNERSVSSSLLLCNETIHMLMYLTSDEAVRKPFLAPALSPRLANTLLSIVDKLVGTKGLEIKVENPDALNFKPKEMLREVALTILHFAGEPAFHTALSESGYYHEGMLGKVQQTMKRVGGMSEAQLEACTALETAVASAAEKAEAEDLGVEVPDEFLDPLLCTLMKDPVRLPTSGYAMERAAIEQHLLNQPTDPFNRQPLSLTDLEPLPELKAKIETWVEEQRLSKRKEKEEKEAHGV 508
BLAST of EWM24691.1 vs. NCBI_GenBank
Match: gi|553182543|ref|XP_005853746.1| (ubiquitin conjugation factor E4 B [Nannochloropsis gaditana CCMP526] >gi|422295316|gb|EKU22615.1| ubiquitin conjugation factor E4 B [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1003.82 bits (2594), Expect = 0.000e+0 Identity = 491/492 (99.80%), Postives = 491/492 (99.80%), Query Frame = 0
Query: 17 QEISLLEPDLLDKAMVFVGGAAAWFSSQAFDAAATPDLAAALAFCSRCPEHLLEDLLVLVKFVGRAHPQSLLTAPLAPFFDLCIQALTRPQLVHSPHLRAKIGDLLYLVFLPPEERLDHSSTSAAATRGHSVYTSFLLNNPLAQASLAPALLLLYGDVEHTGFYDKLEHRFHIAAVLKFLWRSPEHRRTFRRISSDTSQFTSFANGLMNETNALVASVMEKLPEIRSVQLQMKDSPAWAAMPEESRNEIMERHNDNERSVSSSLLLCNETIHMLMYLTSDEAVRKPFLAPALSPRLANTLLSIVDKLVGTKGLEIKVENPDALNFKPKEMLREVALTILHFAGEPAFHTALSESGYYHEGMLGKVQQTMKRVGGMSEAQLEACTALETAVASAAEKAEAEDLGVEVPDEFLDPLLCTLMKDPVRLPTSGYAMERAAIEQHLLNQPTDPFNRQPLSLTDLEPLPELKAKIETWVEEQRLSKRKEKEEKEAHGV 508
QEISLLEPDLLDKAMVFVGGAAAWFSSQAFDAAATPDLAAALAFCSRCPEHLLEDLLVLVKFVGRAHPQSLLTAPLAPFFDLCIQALTRPQLVHSPHLRAKIGDLLYLVFLPPEERLDHSSTSAAATRGHSVYTSFLLNNPLAQASLAPALLLLYGDVEHTGFYDKLEHRFHIAAVLKFLWRSPEHRRTFRRISSDTSQFTSFANGLMNETNALVASVMEKLPEIRSVQLQMKDSPAWAAMPEESRNEIMERHNDNERSVSSSLLLCNETIHMLMYLTSDEAVRKPFLAPALSPRLANTLLSIVDKLVGTKGLEIKVENPDALNFKPKEMLREVALTILHFAGEPAFHTALSESGYYHEGMLGKVQQTMKRVGGMSE QLEACTALETAVASAAEKAEAEDLGVEVPDEFLDPLLCTLMKDPVRLPTSGYAMERAAIEQHLLNQPTDPFNRQPLSLTDLEPLPELKAKIETWVEEQRLSKRKEKEEKEAHGV
Sbjct: 522 QEISLLEPDLLDKAMVFVGGAAAWFSSQAFDAAATPDLAAALAFCSRCPEHLLEDLLVLVKFVGRAHPQSLLTAPLAPFFDLCIQALTRPQLVHSPHLRAKIGDLLYLVFLPPEERLDHSSTSAAATRGHSVYTSFLLNNPLAQASLAPALLLLYGDVEHTGFYDKLEHRFHIAAVLKFLWRSPEHRRTFRRISSDTSQFTSFANGLMNETNALVASVMEKLPEIRSVQLQMKDSPAWAAMPEESRNEIMERHNDNERSVSSSLLLCNETIHMLMYLTSDEAVRKPFLAPALSPRLANTLLSIVDKLVGTKGLEIKVENPDALNFKPKEMLREVALTILHFAGEPAFHTALSESGYYHEGMLGKVQQTMKRVGGMSETQLEACTALETAVASAAEKAEAEDLGVEVPDEFLDPLLCTLMKDPVRLPTSGYAMERAAIEQHLLNQPTDPFNRQPLSLTDLEPLPELKAKIETWVEEQRLSKRKEKEEKEAHGV 1013
BLAST of EWM24691.1 vs. NCBI_GenBank
Match: gi|553182546|ref|XP_005853747.1| (ubiquitin conjugation factor E4 B [Nannochloropsis gaditana CCMP526] >gi|422295317|gb|EKU22616.1| ubiquitin conjugation factor E4 B [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 557.37 bits (1435), Expect = 0.000e+0 Identity = 273/274 (99.64%), Postives = 273/274 (99.64%), Query Frame = 0
Query: 235 MEKLPEIRSVQLQMKDSPAWAAMPEESRNEIMERHNDNERSVSSSLLLCNETIHMLMYLTSDEAVRKPFLAPALSPRLANTLLSIVDKLVGTKGLEIKVENPDALNFKPKEMLREVALTILHFAGEPAFHTALSESGYYHEGMLGKVQQTMKRVGGMSEAQLEACTALETAVASAAEKAEAEDLGVEVPDEFLDPLLCTLMKDPVRLPTSGYAMERAAIEQHLLNQPTDPFNRQPLSLTDLEPLPELKAKIETWVEEQRLSKRKEKEEKEAHGV 508
MEKLPEIRSVQLQMKDSPAWAAMPEESRNEIMERHNDNERSVSSSLLLCNETIHMLMYLTSDEAVRKPFLAPALSPRLANTLLSIVDKLVGTKGLEIKVENPDALNFKPKEMLREVALTILHFAGEPAFHTALSESGYYHEGMLGKVQQTMKRVGGMSE QLEACTALETAVASAAEKAEAEDLGVEVPDEFLDPLLCTLMKDPVRLPTSGYAMERAAIEQHLLNQPTDPFNRQPLSLTDLEPLPELKAKIETWVEEQRLSKRKEKEEKEAHGV
Sbjct: 1 MEKLPEIRSVQLQMKDSPAWAAMPEESRNEIMERHNDNERSVSSSLLLCNETIHMLMYLTSDEAVRKPFLAPALSPRLANTLLSIVDKLVGTKGLEIKVENPDALNFKPKEMLREVALTILHFAGEPAFHTALSESGYYHEGMLGKVQQTMKRVGGMSETQLEACTALETAVASAAEKAEAEDLGVEVPDEFLDPLLCTLMKDPVRLPTSGYAMERAAIEQHLLNQPTDPFNRQPLSLTDLEPLPELKAKIETWVEEQRLSKRKEKEEKEAHGV 274
BLAST of EWM24691.1 vs. NCBI_GenBank
Match: gi|299473683|emb|CBN78076.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 473.011 bits (1216), Expect = 4.473e-154 Identity = 252/511 (49.32%), Postives = 331/511 (64.77%), Query Frame = 0
Query: 9 PAFPFPSPQ---------------EISLLEPDLLDKAMVFVGGAAAWFSSQAFDAAATPDLAAALAFCSR--------------CPEHLLEDLLVLVKFVGRAHPQSLLTAPLAPFFDLCIQALTRPQLVHSPHLRAKIGDLLYLVFLPPEERLDHSSTSAAATRGHSVYTSFLLNNPLAQASLAPALLLLYGDVEHTGFYDKLEHRFHIAAVLKFLWRSPEHRRTFRRISSDTSQFTSFANGLMNETNALVASVMEKLPEIRSVQLQMKDSPAWAAMPEESRNEIMERHNDNERSVSSSLLLCNETIHMLMYLTSDEAVRKPFLAPALSPRLANTLLSIVDKLVGTKGLEIKVENPDALNFKPKEMLREVALTILHFAGEPAFHTALSESGYYHEGMLGKVQQTMKRVGGMSEAQLEACTALETAVASAAEKAEAEDLGV-EVPDEFLDPLLCTLMKDPVRLPTSGYAMERAAIEQHLLNQPTDPFNRQPLSLTDLEPLPELKAKIETWV 489
P P P PQ E+ + +PD+L +++F+ A +W + A ++ SR PEHL+ED+L L+ F+ HPQ+L T+ L P + + L P LV SPHLRA +GD+LY FLP ER + A G +T L ++PLAQ LAP+LLLLYGDVEHTGFY+KL HRF+IAAVLK+LWRS EHR TFRRIS DT +F FANGLMNE+N+LVASVMEKLPE+R+VQLQM+D W AM E RNEI ERH++NERS+ S+L LCNET+HM+ YLTSD ++KPFL L RLA LL ++ +L+G+KGLEIKV+NP++ NF+PKEMLRE+ TI F+ +P FH L+ SGYY E +L K TM+R+ + + + +L +AV A EA + + EVPDEFLDP+LC +M+DPV LPTSG ++R+ I QHLLN DPFNRQPL+ +EP EL+ +IE ++
Sbjct: 444 PGSPNPDPQMDMHFNMFVQRKLVAEVVISDPDVLADSLMFMVKAGSWLTEFVSKEAGVAIDSSEHEISSRGSLAGLSEDSLVWQLPEHLIEDILELILFLTNHHPQTLGTSQLYPLMTMVVFFLAHPSLVKSPHLRASLGDVLYKTFLPRSERGNEDPYGAPL--GGDAHTGLLYSHPLAQKHLAPSLLLLYGDVEHTGFYEKLTHRFYIAAVLKYLWRSKEHRSTFRRISQDTGKFVRFANGLMNESNSLVASVMEKLPEVRAVQLQMRDPAQWGAMTETQRNEIAERHDENERSLKSNLSLCNETLHMVAYLTSDPDIQKPFLREELLLRLAEMLLCVLKQLIGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQEDLLPKATSTMRRLQLLPASSMADMDSLCSAVIEARASYEASEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDRSTIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFL 952
BLAST of EWM24691.1 vs. NCBI_GenBank
Match: gi|224003717|ref|XP_002291530.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973306|gb|EED91637.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 375.17 bits (962), Expect = 5.071e-122 Identity = 192/439 (43.74%), Postives = 274/439 (62.41%), Query Frame = 0
Query: 65 PEHLLEDLLVLVKFVGRAHPQSLLTAPLAPFFDLCIQALTR--PQLVHSPHLRAKIGDLLYLVFLP--PEERLDHSSTSAAATRGHSVYTSFLLNNPLAQASLAPALLLLYGDVEHTGFYDKLEHRFHIAAVLKFLWRSPEHRRTFRRISSDTSQFTSFANGLMNETNALVASVMEKLPEIRSVQLQMKDSPAWAAMPEESRNEIMERHNDNERSVSSSLLLCNETIHMLMYLTSDEAVRKPFLAPALSPRLANTLLSIVDKLVGTKGLEIKVENPDALNFKPKEMLREVALTILHFAGEPAFHTALSESGYYHEGMLGKVQQTMKRVGGMSEAQLEACTALETAVASAAE-KAEAEDLGVEVPDEFLDPLLCTLMKDPVRLPTSGYAMERAAIEQHLLNQPTDPFNRQPLSLTDLEPLPELKAKIETWVEEQRLSKRK 498
PEH++ D ++ + P+ L A F L ++ L+R LV + +LRAK+GDL++ +FLP ++R D + A +L ++ LAQ +LAP+LLLLYG+VEHTGFY+K HR IA +LK+LW SPEH+ F+RI+ D F FANG++NE N+ ASVME+LP IR+VQLQM + WAA+ EE R I RH +NERS+ L LCN + ML +L +D+ +R FL P + PRLAN LL ++ KLVG++GL++KV NP+ NF+PKEML+++ + FA F ++SGYY ++ K +T +++G + +E L + V A++ EDL + PDEF+DPLL M DPV LPTSG ++R I QHLLN DPFNR+ L L D+ P ELKAK++ W+ +R ++ K
Sbjct: 41 PEHIVTDFCAVLNYASEFTPKLLSGIDFADIFRLTVKLLSREYAHLVRNYNLRAKLGDLIHDIFLPGTSDDRSDVPDSVACDPLAGG--QPYLTSDKLAQETLAPSLLLLYGEVEHTGFYEKNGHRTKIAKMLKYLWGSPEHKAAFKRITEDKESFRKFANGIVNEMNSQFASVMERLPAIRTVQLQMANPQEWAALSEEDRETITSRHEENERSIKQVLPLCNSVMKMLGFLNTDKDIRDMFLLPDMCPRLANMLLHVLTKLVGSRGLDLKVNNPETYNFRPKEMLQDLCVVFSSFAAADEFQVECAKSGYYTPDLMNKSVKTCRKLGLLVGESMELFAELASKVEEASKIMTSDEDLYEDAPDEFMDPLLSEFMNDPVLLPTSGNIVDRKTITQHLLNDSMDPFNRKELKLEDVVPAVELKAKMDAWLAAKRKARAK 477
BLAST of EWM24691.1 vs. NCBI_GenBank
Match: gi|635364254|emb|CCI47272.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 385.185 bits (988), Expect = 2.050e-119 Identity = 195/432 (45.14%), Postives = 278/432 (64.35%), Query Frame = 0
Query: 65 PEHLLEDLLVLVKFVGRAHPQSLLTAPLAPFFDLCIQALTRPQLVHSPHLRAKIGDLLYLVFLPPEERLDHSSTSAAATRGHSVYTSFLLNNPLAQASLAPALLLLYGDVEHTGFYDKLEHRFHIAAVLKFLWRSPEHRRTFRRISSDTSQFTSFANGLMNETNALVASVMEKLPEIRSVQLQMKDSPAWAAMPEESRNEIMERHNDNERSVSSSLLLCNETIHMLMYLTSDEAVRKPFL-APALSPRLANTLLSIVDKLVGTKGLEIKVENPDALNFKPKEMLREVALTILHFAGEPAFHTALSESGYYHEGMLGKVQQTMKRVGGMSEAQLEACTALETAVASAAEKAEAED--LGVEVPDEFLDPLLCTLMKDPVRLPTSGYAMERAAIEQHLLNQPTDPFNRQPLSLTDLEPLPELKAKIETWVEEQR 493
P H +ED+ ++ F+ R P+SL T L P D+ + L+ P +HSPHLRAK+ ++LY VFLP +E +H S AA+T + +++ PLAQ LAP LL LYGDVE TGFY+KLEHR+HIA +L++LW+ P H+ F RIS+D +F FA+GLMN N+LV + LPEI+ +Q +M+D W A+ E R + D ER+V+SSL L NETIHM+ YLT++ +++PFL P L RL + L ++ KL G +GLE+KV NP+ F+PKEML+EV T++HFA +F A++ +G+Y E + K ++R + + + VA A + + ++ LG E+PDEF+DPL+CT+MKDPV LPTSGY M+RA I QHLLN +DPF R L++ L P ELKA+++ W+ R
Sbjct: 639 PAHFIEDICAVLIFISRVSPKSLSTFALDPLLDMILIFLSSPSYIHSPHLRAKMSEVLYHVFLPSDEAEEHQS--AASTLAIDLLSTY----PLAQEHLAPCLLALYGDVEQTGFYEKLEHRYHIACLLRYLWKVPGHKSAFVRISADEDKFVKFAHGLMNHINSLVTDALIALPEIKQLQEEMQDEARWMALDETVREQKQNLLADKERTVTSSLQLANETIHMMSYLTTE--IQEPFLRKPELEERLVSMLNCVLVKLAGPRGLELKVNNPEQYRFRPKEMLKEVVETLMHFAEFTSFQEAVALNGFYEEKIFSKCSNILRRTQLLPDQVITKFDVFLNNVAHRASQLKDDEAMLG-EIPDEFMDPLVCTIMKDPVILPTSGYTMDRATITQHLLNDQSDPFTRASLTIEQLVPNIELKAQVDAWIASAR 1061
BLAST of EWM24691.1 vs. NCBI_GenBank
Match: gi|325193562|emb|CCA27857.1| (ubiquitin conjugation factor E4 putative [Albugo laibachii Nc14]) HSP 1 Score: 382.874 bits (982), Expect = 1.859e-118 Identity = 194/427 (45.43%), Postives = 272/427 (63.70%), Query Frame = 0
Query: 65 PEHLLEDLLVLVKFVGRAHPQSLLTAPLAPFFDLCIQALTRPQLVHSPHLRAKIGDLLYLVFLPPEERLDHSSTSAAATRGHSVYTSFLLNNPLAQASLAPALLLLYGDVEHTGFYDKLEHRFHIAAVLKFLWRSPEHRRTFRRISSDTSQFTSFANGLMNETNALVASVMEKLPEIRSVQLQMKDSPAWAAMPEESRNEIMERHNDNERSVSSSLLLCNETIHMLMYLTSDEAVRKPFL-APALSPRLANTLLSIVDKLVGTKGLEIKVENPDALNFKPKEMLREVALTILHFAGEPAFHTALSESGYYHEGMLGKVQQTMKRVGGMSEAQLEACTALETAVAS-AAEKAEAEDLGVEVPDEFLDPLLCTLMKDPVRLPTSGYAMERAAIEQHLLNQPTDPFNRQPLSLTDLEPLPELKAKIETWV 489
P HL+ED+ ++ F+ R P+SL L P D+ + L+ P +HSPHLRAK+ ++LY VFLP +E +H S ++ + L PLAQ LAP LL LYGDVE TGFY+KLEHR+HIA +L++LW+ P H+ F RIS D +F FA+GLMN N LV + LPEI+ +Q +M+D W A+ E R + D ER+V+SSL L NETIHM+ YLT++ +++PFL P L R+ + L S++ KL G +GLE+KV NP+ F+PKEML+EV T+LHFA +F A++ +G+Y E + K ++R + E + VA A++ + E + E+PDEF+DPL+CTLMKDPV LPTSGY M+RA I QHLLN +DPF R PL++ L P +LKA+++ W+
Sbjct: 640 PAHLVEDICAVLIFIARVSPKSLTNFALDPLLDMILIFLSSPSYIHSPHLRAKMSEVLYHVFLPLDEAEEHQSAASP------LAIDLLSTYPLAQEHLAPCLLALYGDVEQTGFYEKLEHRYHIACLLRYLWKVPGHKSAFVRISEDEDKFVKFAHGLMNHINTLVTDALIALPEIKQLQEEMQDIAGWMALEEAVREQKQNLLADKERTVTSSLQLANETIHMMSYLTTE--IQEPFLRKPELEERVVSMLNSVLVKLAGPRGLELKVNNPEQYRFRPKEMLKEVVETLLHFAEFTSFQGAVAVNGFYEEKIFSKCSNILRRTQLLPEQVIAKFDVFLRNVAQRASQLVKDEAMLGEIPDEFMDPLVCTLMKDPVILPTSGYTMDRATITQHLLNDQSDPFTRAPLTIDQLVPNVQLKAQVDAWM 1058
BLAST of EWM24691.1 vs. NCBI_GenBank
Match: gi|301120045|ref|XP_002907750.1| (ubiquitin conjugation factor E4, putative [Phytophthora infestans T30-4] >gi|262106262|gb|EEY64314.1| ubiquitin conjugation factor E4, putative [Phytophthora infestans T30-4]) HSP 1 Score: 368.237 bits (944), Expect = 4.545e-113 Identity = 209/487 (42.92%), Postives = 290/487 (59.55%), Query Frame = 0
Query: 21 LLEPDLLDKAMVF---VGGAAAWF--SSQAFDAAA------TPDLAAALAFCSRCPEHLLEDLLVLVKFVGRAHPQSLLTAPLAPFFDLCIQALTRPQLVHSPHLRAKIGDLLYLVFLPPEERLDHSSTSAAATRGHSVYTSFLLNNPLAQASLAPALLLLYGDVEHTGFYDKLEHRFHIAAVLKFLWRSPEHRRTFRRISSDTSQFTSFANGLMNETNALVASVMEKLPEIRSVQLQMKDSPAWAAMPEESRNEIMERHNDNERSVSSSLLLCNETIHMLMYLTSDEAVRKPFLA-PALSPRLANTLLSIVDKLVGTKGLEIKVENPDALNFKPKEMLREVALTILHFAGEPAFHTALSESGYYHEGMLGKVQQTMKRVGGMSEAQLEACTALETAVASAAEKAE--AEDLGVEVPDEFLDPLLCTLMKDPVRLPTSGYAMERAAIEQHLLNQPTDPFNRQPLSLTDLEPLPELKAKIETWVEEQR 493
LL PDLL + + F G + S AFD ++ PD A PEHL++DL ++KF+ R P++L L + + L+ P VHSPHLRAK+ ++L+ +FLP EE + T G + L + LAQ LAP LL LYGDVEHTGFY+KLEHR++IA +LK+LW+ H+ F RIS D F FA+GLMN N+LV + LPEI+ +Q +M+D W A+ E R + +D ER+V+SSL L NETIHM+ YLTS+ +++PF+ P L RL L S++ KL G +G+E+KV NP+ F+PK ML+E+ T+LHFA P+F A++ +G+Y + K + R + + + V AAE A E LG E+P+EFLDPL+ TLMKDPV LP SGY M+R+ I QHL+N +DPF R PL++ L+P +LK KIE WV+EQ+
Sbjct: 570 LLHPDLLHEMIRFSLLTCGVVSSICTGSTAFDQSSLDLPLPAPDTETN-ALLKYIPEHLVDDLSSVLKFIARLQPKALAAFELKKLLRMILVFLSSPGYVHSPHLRAKMSEVLFHIFLPSEE------SEERETAGTAFGVELLRTDALAQRHLAPCLLALYGDVEHTGFYEKLEHRYNIACLLKYLWKLEGHKPAFLRISEDRENFVKFAHGLMNHINSLVTDALIALPEIKVLQEEMQDVARWMALDESVREQKQSLLSDKERTVTSSLQLANETIHMMSYLTSE--IQEPFVKMPELEDRLVGMLNSVIVKLTGPRGVELKVNNPEQYKFRPKVMLKEIVETLLHFAQYPSFLEAVATNGFYDGPVFRKCAHIVARTQLLEPSDIPKFETFVVEVEKAAEGAANLEETLG-EIPEEFLDPLVFTLMKDPVLLP-SGYTMDRSCITQHLMNDQSDPFTRVPLTVDQLQPNTDLKTKIEQWVQEQQ 1045
BLAST of EWM24691.1 vs. NCBI_GenBank
Match: gi|1214690002|gb|OWZ05377.1| (Ubiquitin conjugation factor E4 [Phytophthora megakarya]) HSP 1 Score: 366.696 bits (940), Expect = 2.269e-112 Identity = 197/447 (44.07%), Postives = 277/447 (61.97%), Query Frame = 0
Query: 50 ATPDLAAALAFCSRCPEHLLEDLLVLVKFVGRAHPQSLLTAPLAPFFDLCIQALTRPQLVHSPHLRAKIGDLLYLVFLPPEERLDHSSTSAAATRGHSVYTSFLLNNPLAQASLAPALLLLYGDVEHTGFYDKLEHRFHIAAVLKFLWRSPEHRRTFRRISSDTSQFTSFANGLMNETNALVASVMEKLPEIRSVQLQMKDSPAWAAMPEESRNEIMERHNDNERSVSSSLLLCNETIHMLMYLTSDEAVRKPFLA-PALSPRLANTLLSIVDKLVGTKGLEIKVENPDALNFKPKEMLREVALTILHFAGEPAFHTALSESGYYHEGMLGKVQQTMKRVGGMSEAQLEACTALETAVASAAEKAEA--EDLGVEVPDEFLDPLLCTLMKDPVRLPTSGYAMERAAIEQHLLNQPTDPFNRQPLSLTDLEPLPELKAKIETWVEEQR 493
A PD + A PEHL++DL +KFV R P++L L + I L+ P VHSPHLRAK+ ++L+ +FLP EE + T G + L+ +PLAQ +AP LL LYGDVEHTGFY+KLEHR++IA +LK+LW+ H+ F IS D F FA+GLMN N+LV + LPEI+ +Q +M+D W A+ E R + +D ER+V+SSL L NETIHM+ YLTS+ +++PF+ P L RL + L S++ KL G +G+E+KV NP+ F+PK ML+E+ T+LHFA P+F A++ +G+Y + K + R + + ++ V AAE A E LG ++P+EFLDPL+ TLMKDPV LP SGY M+R+ I QHL+N +DPF R PL++ L+P +LK KIE WV++Q+
Sbjct: 620 AAPDTESN-AVLKYIPEHLIDDLCTALKFVARLQPKALSAFELKELLRMIIIFLSSPSYVHSPHLRAKMSEVLFHIFLPSEE------SEERETAGTAFGVELLMTDPLAQRHIAPCLLALYGDVEHTGFYEKLEHRYNIACLLKYLWKLDGHKPAFLMISEDRENFVKFAHGLMNHINSLVTDALIALPEIKVLQEEMQDVARWMALDETVREQKQSLLSDKERTVTSSLQLANETIHMMSYLTSE--IQEPFVKMPELEDRLVSMLNSVIVKLAGPRGVELKVNNPEQYKFRPKVMLKEIVETLLHFAHYPSFLEAVATNGFYDGQVFRKCAHIVARTHLLEPSDVQKFEVFVVDVEKAAEGAANLEEALG-DIPEEFLDPLVFTLMKDPVLLP-SGYTMDRSCITQHLMNDQSDPFTRVPLTMDQLQPNTDLKTKIERWVQDQQ 1055
BLAST of EWM24691.1 vs. NCBI_GenBank
Match: gi|953502290|emb|CEG36476.1| (ubiquitin conjugation factor [Plasmopara halstedii]) HSP 1 Score: 364.385 bits (934), Expect = 1.780e-111 Identity = 203/486 (41.77%), Postives = 291/486 (59.88%), Query Frame = 0
Query: 21 LLEPDLLDKAMVFVGGAAAWFSS-----QAFDAAA------TPDLAAALAFCSRCPEHLLEDLLVLVKFVGRAHPQSLLTAPLAPFFDLCIQALTRPQLVHSPHLRAKIGDLLYLVFLPPEERLDHSSTSAAATRGHSVYTSFLLNNPLAQASLAPALLLLYGDVEHTGFYDKLEHRFHIAAVLKFLWRSPEHRRTFRRISSDTSQFTSFANGLMNETNALVASVMEKLPEIRSVQLQMKDSPAWAAMPEESRNEIMERHNDNERSVSSSLLLCNETIHMLMYLTSDEAVRKPFLA-PALSPRLANTLLSIVDKLVGTKGLEIKVENPDALNFKPKEMLREVALTILHFAGEPAFHTALSESGYYHEGMLGKVQQTMKRVGGMSEAQLEACTALETAVASAAEKAEA-EDLGVEVPDEFLDPLLCTLMKDPVRLPTSGYAMERAAIEQHLLNQPTDPFNRQPLSLTDLEPLPELKAKIETWVEEQR 493
LL PD L + + F +A SS FD + +PD+ PEHL++DL ++KFV R P++L L + + L+ P VHSPHLRAK+ ++L+ +FLP + ++ T G + L +N LAQ LAP LL LYGDVE TGFY+KLEHR++IA +LK+LW+ H+ F I+ D F FA+GLMN N+LV + LPEI+ +Q +M++ W A+ E R + +D ER+V SSL L NETIHM+ YLTS+ ++ PF+ P L RL + L S++ KL G +G+E+KV NP+ F+PK ML+E+ T+LHFA P+F A++ +GYY + K Q + R + ++ +A AAE A + E++ ++PDEFLDPL+ TLMKDPV LP SGY M+R+ I QHL+N +DPF R PL++ L+ ELKAKIE+W++EQ+
Sbjct: 584 LLHPDFLHEIIRFALLTSAVVSSICTGLNVFDLNSISLPLPSPDVETNRVL-KYVPEHLVDDLCSVLKFVARLQPKALNLFELDGLLKMILIFLSSPSYVHSPHLRAKMSEVLFYIFLPSD------ASDERETAGTAFGMELLRSNVLAQRHLAPCLLALYGDVEQTGFYEKLEHRYNIACLLKYLWKIDGHKSAFFTIAEDRENFVKFAHGLMNHINSLVTDALIALPEIKLLQEEMQNIAQWMALDESVREQKQSLLSDKERTVISSLQLANETIHMMSYLTSE--IQAPFVQMPELEDRLVSMLTSVIVKLAGPRGIELKVNNPEQYKFRPKVMLKEIVETLLHFAHYPSFLQAVATNGYYDGPVFRKCAQIVARTQLLEPNDVQKFETFVGDLAKAAEGAASLEEVLGDIPDEFLDPLVFTLMKDPVLLP-SGYTMDRSCITQHLMNDQSDPFTRVPLTMDQLQSNTELKAKIESWIQEQQ 1059 The following BLAST results are available for this feature:
BLAST of EWM24691.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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