EWM24715.1, cds5958 (CDS) Nannochloropsis gaditana

Overview
NameEWM24715.1
Unique Namecds5958
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:249484..249570 +
Alignment locationCM002467.1:250169..250282 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24715.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101966g1.8587.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:249484..249570 +
CM002467.1supercontigCM002467.1:250169..250282 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24715.1 vs. NCBI_GenBank
Match: gi|585106247|gb|EWM24715.1| (hypothetical protein Naga_101966g1 [Nannochloropsis gaditana])

HSP 1 Score: 137.117 bits (344), Expect = 4.236e-41
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 
Query:    1 MEEEGQIDFKIGFSSHPGAQVAKLDVRFQRPPPRCACASTCSQGACTPTPRTAVWRGRCRFIQTSV 66
            MEEEGQIDFKIGFSSHPGAQVAKLDVRFQRPPPRCACASTCSQGACTPTPRTAVWRGRCRFIQTSV
Sbjct:    1 MEEEGQIDFKIGFSSHPGAQVAKLDVRFQRPPPRCACASTCSQGACTPTPRTAVWRGRCRFIQTSV 66
The following BLAST results are available for this feature:
BLAST of EWM24715.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106247|gb|EWM24715.1|4.236e-41100.00hypothetical protein Naga_101966g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5973rna5973Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications