EWM24716.1, cds5956 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24716.1 vs. NCBI_GenBank
Match: gi|585106250|gb|EWM24716.1| (yippee-like protein [Nannochloropsis gaditana]) HSP 1 Score: 253.832 bits (647), Expect = 1.397e-85 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
Query: 1 MLQLCLSFLASSASRYLDGPQIWCCSQCWTHLSTNDQIISKQFTGRGGRAFLYDKVINVTTGQHEKRMLITGLHTVADIFCLDCQALLGWKYEEAFEESQKYKEGKYILEKTCITKDPDGE 121
MLQLCLSFLASSASRYLDGPQIWCCSQCWTHLSTNDQIISKQFTGRGGRAFLYDKVINVTTGQHEKRMLITGLHTVADIFCLDCQALLGWKYEEAFEESQKYKEGKYILEKTCITKDPDGE
Sbjct: 1 MLQLCLSFLASSASRYLDGPQIWCCSQCWTHLSTNDQIISKQFTGRGGRAFLYDKVINVTTGQHEKRMLITGLHTVADIFCLDCQALLGWKYEEAFEESQKYKEGKYILEKTCITKDPDGE 121
BLAST of EWM24716.1 vs. NCBI_GenBank
Match: gi|470530408|ref|XP_004368245.1| (Protein yippeelike 1, putative [Acanthamoeba castellanii str. Neff] >gi|440804613|gb|ELR25490.1| Protein yippeelike 1, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 147.517 bits (371), Expect = 1.335e-43 Identity = 67/101 (66.34%), Postives = 80/101 (79.21%), Query Frame = 0
Query: 16 YLDGPQIWCCSQCWTHLSTNDQIISKQFTGRGGRAFLYDKVINVTTGQHEKRMLITGLHTVADIFCLDCQALLGWKYEEAFEESQKYKEGKYILEKTCITK 116
YL GP ++ C C THL+ + IISK F R G+A+L+DKV+NVT+G E R+LITGLHTVAD+FC DCQA +GWKYEEAFEESQKYKEGK+ILEK I K
Sbjct: 8 YLSGPGVYKCHSCDTHLAKHGDIISKAFQSRSGKAYLFDKVVNVTSGPKEDRILITGLHTVADVFCSDCQAYVGWKYEEAFEESQKYKEGKFILEKAKIVK 108
BLAST of EWM24716.1 vs. NCBI_GenBank
Match: gi|302784428|ref|XP_002973986.1| (hypothetical protein SELMODRAFT_100523 [Selaginella moellendorffii] >gi|302803514|ref|XP_002983510.1| hypothetical protein SELMODRAFT_445590 [Selaginella moellendorffii] >gi|300148753|gb|EFJ15411.1| hypothetical protein SELMODRAFT_445590 [Selaginella moellendorffii] >gi|300158318|gb|EFJ24941.1| hypothetical protein SELMODRAFT_100523 [Selaginella moellendorffii]) HSP 1 Score: 139.813 bits (351), Expect = 1.630e-40 Identity = 62/101 (61.39%), Postives = 78/101 (77.23%), Query Frame = 0
Query: 17 LDGPQIWCCSQCWTHLSTNDQIISKQFTGRGGRAFLYDKVINVTTGQHEKRMLITGLHTVADIFCLDCQALLGWKYEEAFEESQKYKEGKYILEKTCITKD 117
L GP+I+ CS C +H++ +D IISK F GR GRA+L+ V+N + GQ E R L+TGLHTVADIFC CQ +LGWKYE A+EESQKYKEGK+ILEK + K+
Sbjct: 16 LTGPRIYSCSNCRSHIADHDDIISKAFQGRNGRAYLFSHVVNTSVGQKEDRHLMTGLHTVADIFCQQCQEILGWKYERAYEESQKYKEGKFILEKAKVMKE 116
BLAST of EWM24716.1 vs. NCBI_GenBank
Match: gi|551664177|ref|XP_005834852.1| (hypothetical protein GUITHDRAFT_106421 [Guillardia theta CCMP2712] >gi|428178999|gb|EKX47872.1| hypothetical protein GUITHDRAFT_106421 [Guillardia theta CCMP2712]) HSP 1 Score: 139.428 bits (350), Expect = 2.393e-40 Identity = 65/104 (62.50%), Postives = 81/104 (77.88%), Query Frame = 0
Query: 16 YLDGPQIWCCSQCWTHLSTNDQIISKQFTGRGGRAFLYDKVINVTTGQHEKRMLITGLHTVADIFCLDCQALLGWKYEEAFEESQKYKEGKYILEKTCITKDPD 119
YL G +I+ CS C THL+ +DQI+SK F GR GRAFL+ V+N+T G E R+LITGLHTVAD++C CQA+LGWKY EAFEESQKYKEGK I+EK + +P+
Sbjct: 8 YLCGDRIYSCSGCRTHLAKHDQIVSKAFQGRHGRAFLFSNVVNITLGPKEDRILITGLHTVADVYCNCCQAVLGWKYVEAFEESQKYKEGKCIIEKAKMAMEPN 111
BLAST of EWM24716.1 vs. NCBI_GenBank
Match: gi|302842771|ref|XP_002952928.1| (hypothetical protein VOLCADRAFT_82034 [Volvox carteri f. nagariensis] >gi|300261639|gb|EFJ45850.1| hypothetical protein VOLCADRAFT_82034 [Volvox carteri f. nagariensis]) HSP 1 Score: 138.272 bits (347), Expect = 4.380e-40 Identity = 61/105 (58.10%), Postives = 79/105 (75.24%), Query Frame = 0
Query: 15 RYLDGPQIWCCSQCWTHLSTNDQIISKQFTGRGGRAFLYDKVINVTTGQHEKRMLITGLHTVADIFCLDCQALLGWKYEEAFEESQKYKEGKYILEKTCITKDPD 119
+YL GP+I+ C+ C H + +D IISK F GR GRA+L + +NV+ G E+R+LITGLHTVADI+C C +LGWKYE AFEESQKYKEGKYI+EK + K+ +
Sbjct: 7 QYLSGPRIYSCATCRAHAADHDDIISKAFQGRHGRAYLINNAVNVSLGPREERVLITGLHTVADIYCTSCNTVLGWKYEHAFEESQKYKEGKYIIEKAKVMKEGN 111
BLAST of EWM24716.1 vs. NCBI_GenBank
Match: gi|1004135860|gb|KXZ43909.1| (hypothetical protein GPECTOR_78g97 [Gonium pectorale]) HSP 1 Score: 138.272 bits (347), Expect = 5.895e-40 Identity = 61/102 (59.80%), Postives = 80/102 (78.43%), Query Frame = 0
Query: 15 RYLDGPQIWCCSQCWTHLSTNDQIISKQFTGRGGRAFLYDKVINVTTGQHEKRMLITGLHTVADIFCLDCQALLGWKYEEAFEESQKYKEGKYILEKTCITK 116
+YL+GP+I+ C+ C H + +D IISK+F GR GRA+L + +NV+ G E+R+LITGLHTVADIFC C ++LGWKYE AFEESQKYKEGK+I+EK + K
Sbjct: 7 QYLNGPRIYSCATCRAHAADHDDIISKEFQGRHGRAYLINNAVNVSLGPREERVLITGLHTVADIFCTCCNSVLGWKYEHAFEESQKYKEGKFIIEKAKVMK 108
BLAST of EWM24716.1 vs. NCBI_GenBank
Match: gi|971506255|dbj|GAQ91951.1| (hypothetical protein KFL_008890030 [Klebsormidium nitens]) HSP 1 Score: 139.043 bits (349), Expect = 6.213e-40 Identity = 63/103 (61.17%), Postives = 82/103 (79.61%), Query Frame = 0
Query: 15 RYLDGPQIWCCSQCWTHLSTNDQIISKQFTGRGGRAFLYDKVINVTTGQHEKRMLITGLHTVADIFCLDCQALLGWKYEEAFEESQKYKEGKYILEKTCITKD 117
+YL+GP+I+ CS C H + +D+IISKQF GR GRA+L++ V+NVT G E R L TGLHTVADI+C CQ +LGWKYE+A++ESQKYKEGKYI+EK + K+
Sbjct: 40 QYLNGPRIYSCSNCRCHSADHDEIISKQFQGRYGRAYLFNSVVNVTLGPKEDRHLTTGLHTVADIYCSCCQQILGWKYEQAYDESQKYKEGKYIIEKARMMKE 142
BLAST of EWM24716.1 vs. NCBI_GenBank
Match: gi|1109241761|ref|XP_019195570.1| (PREDICTED: protein yippee-like At4g27745 [Ipomoea nil] >gi|1109241763|ref|XP_019195571.1| PREDICTED: protein yippee-like At4g27745 [Ipomoea nil]) HSP 1 Score: 137.887 bits (346), Expect = 7.807e-40 Identity = 61/99 (61.62%), Postives = 77/99 (77.78%), Query Frame = 0
Query: 19 GPQIWCCSQCWTHLSTNDQIISKQFTGRGGRAFLYDKVINVTTGQHEKRMLITGLHTVADIFCLDCQALLGWKYEEAFEESQKYKEGKYILEKTCITKD 117
GP+++CC +C H+S +D IISK F GR GRAFL+ V+NV G E R L+TGLHTVAD+FC DC LLGWKYE A+E++QKYKEGK+ILEK+ I K+
Sbjct: 13 GPRLYCCYKCKNHVSVHDDIISKAFQGRNGRAFLFSHVMNVIVGAKEDRHLMTGLHTVADVFCGDCHELLGWKYERAYEDTQKYKEGKFILEKSKIVKE 111
BLAST of EWM24716.1 vs. NCBI_GenBank
Match: gi|356535282|ref|XP_003536177.1| (PREDICTED: protein yippee-like At4g27745 [Glycine max] >gi|734358263|gb|KHN14756.1| Protein yippee-like [Glycine soja] >gi|947085545|gb|KRH34266.1| hypothetical protein GLYMA_10G173200 [Glycine max]) HSP 1 Score: 137.502 bits (345), Expect = 9.363e-40 Identity = 58/99 (58.59%), Postives = 76/99 (76.77%), Query Frame = 0
Query: 19 GPQIWCCSQCWTHLSTNDQIISKQFTGRGGRAFLYDKVINVTTGQHEKRMLITGLHTVADIFCLDCQALLGWKYEEAFEESQKYKEGKYILEKTCITKD 117
GP+++CCS C H++ +D +ISK F G+ GRAFL+ +NVT G E R L+TGLHTVAD++C DC +LGWKYE A+EESQKYKEGKY+LEK I ++
Sbjct: 6 GPRLYCCSNCRNHVALHDDVISKAFQGKSGRAFLFSHAMNVTVGPKEDRELMTGLHTVADVYCSDCHEVLGWKYERAYEESQKYKEGKYVLEKAKIARE 104
BLAST of EWM24716.1 vs. NCBI_GenBank
Match: gi|470431588|ref|XP_004338414.1| (Yippee putative zincbinding protein [Acanthamoeba castellanii str. Neff] >gi|440795267|gb|ELR16401.1| Yippee putative zincbinding protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 137.117 bits (344), Expect = 1.573e-39 Identity = 61/104 (58.65%), Postives = 80/104 (76.92%), Query Frame = 0
Query: 16 YLDGPQIWCCSQCWTHLSTNDQIISKQFTGRGGRAFLYDKVINVTTGQHEKRMLITGLHTVADIFCLDCQALLGWKYEEAFEESQKYKEGKYILEKTCITKDPD 119
YL G ++ CS+C +HL+ D+I+SK F GR G+A+L+ V+NV+TG E R+L+TGLHTVADI C DC +++GWKYEEA EESQ+YK GKYILEKT + K D
Sbjct: 8 YLSGSVVYTCSRCNSHLARADEIVSKAFQGRHGQAYLFSSVVNVSTGPREDRILLTGLHTVADISCNDCHSVVGWKYEEAVEESQQYKVGKYILEKTKLAKKTD 111 The following BLAST results are available for this feature:
BLAST of EWM24716.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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