EWM24726.1, cds5950 (CDS) Nannochloropsis gaditana

Overview
NameEWM24726.1
Unique Namecds5950
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:225697..226388 -
Alignment locationCM002467.1:224491..225385 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24726.1
Productsplicing factor 4
Orig transcript idgnl|cribi|Naga_100180g6.4039.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:225697..226388 -
CM002467.1supercontigCM002467.1:224491..225385 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR000467G_patch_dom
Homology
BLAST of EWM24726.1 vs. NCBI_GenBank
Match: gi|585106261|gb|EWM24726.1| (splicing factor 4 [Nannochloropsis gaditana])

HSP 1 Score: 1048.11 bits (2709), Expect = 0.000e+0
Identity = 528/528 (100.00%), Postives = 528/528 (100.00%), Query Frame = 0
Query:    1 MYPSQQYYPPSSAPPPSPPQQPQQQEEYDPLAATSSQANEGGPPGAYDPLGAPPPPPPPPPSNTPAPTNIYADAQGSFIERFAQMKEEKEREDKSLQEAERQVKALKEAHARRVAAENQSQRKRKGGRSGGVMMKRRGGAGTVASVFSMEDDEDEEGDEEGKKGQLEAGEEGGPQPPKRSRWASEGEKDVEHGEERMTEEMEAKIRALAAWKVKNPERGSQLEEERRGQPGTAAVAKKPKRNRWGPESGVPPSAPPSAPPSLPPSLPPSTRKKDGKKNALDEYLPTVMDAAAMTQLQEQKRIQALEKKIREAARLKALAEGGKEGGKEVELFQERALYYEELAEKEGKGQSEGEAIRAIEAENRRAAGGVEDGGTWEHRKRAKEMLQTAEDALHVTLASKGRHHVAQYLPAGEMERLLQSAGKGGAGKGGDEGDFAANRLEAETNVGMQLLKKQGWNEGQGLGAEGKTGVKAPVNMQTTGGEGVGVGGGGEEEAGEEGGDDFENYRRRMMLAYRFRPNPLNNPRRAYY 528
            MYPSQQYYPPSSAPPPSPPQQPQQQEEYDPLAATSSQANEGGPPGAYDPLGAPPPPPPPPPSNTPAPTNIYADAQGSFIERFAQMKEEKEREDKSLQEAERQVKALKEAHARRVAAENQSQRKRKGGRSGGVMMKRRGGAGTVASVFSMEDDEDEEGDEEGKKGQLEAGEEGGPQPPKRSRWASEGEKDVEHGEERMTEEMEAKIRALAAWKVKNPERGSQLEEERRGQPGTAAVAKKPKRNRWGPESGVPPSAPPSAPPSLPPSLPPSTRKKDGKKNALDEYLPTVMDAAAMTQLQEQKRIQALEKKIREAARLKALAEGGKEGGKEVELFQERALYYEELAEKEGKGQSEGEAIRAIEAENRRAAGGVEDGGTWEHRKRAKEMLQTAEDALHVTLASKGRHHVAQYLPAGEMERLLQSAGKGGAGKGGDEGDFAANRLEAETNVGMQLLKKQGWNEGQGLGAEGKTGVKAPVNMQTTGGEGVGVGGGGEEEAGEEGGDDFENYRRRMMLAYRFRPNPLNNPRRAYY
Sbjct:    1 MYPSQQYYPPSSAPPPSPPQQPQQQEEYDPLAATSSQANEGGPPGAYDPLGAPPPPPPPPPSNTPAPTNIYADAQGSFIERFAQMKEEKEREDKSLQEAERQVKALKEAHARRVAAENQSQRKRKGGRSGGVMMKRRGGAGTVASVFSMEDDEDEEGDEEGKKGQLEAGEEGGPQPPKRSRWASEGEKDVEHGEERMTEEMEAKIRALAAWKVKNPERGSQLEEERRGQPGTAAVAKKPKRNRWGPESGVPPSAPPSAPPSLPPSLPPSTRKKDGKKNALDEYLPTVMDAAAMTQLQEQKRIQALEKKIREAARLKALAEGGKEGGKEVELFQERALYYEELAEKEGKGQSEGEAIRAIEAENRRAAGGVEDGGTWEHRKRAKEMLQTAEDALHVTLASKGRHHVAQYLPAGEMERLLQSAGKGGAGKGGDEGDFAANRLEAETNVGMQLLKKQGWNEGQGLGAEGKTGVKAPVNMQTTGGEGVGVGGGGEEEAGEEGGDDFENYRRRMMLAYRFRPNPLNNPRRAYY 528          
BLAST of EWM24726.1 vs. NCBI_GenBank
Match: gi|298713305|emb|CBJ27001.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 182.185 bits (461), Expect = 1.626e-45
Identity = 125/272 (45.96%), Postives = 160/272 (58.82%), Query Frame = 0
Query:  272 KKDGKKNALDEYLPTVMDAAAMTQLQEQKRIQALEKKIREAARLKALAEG--------------GKEGGKEVELFQERALYYEELAEKEGKGQSEGEAIRAIEAENRRAAGGVEDGGTWEHRKRAKEMLQTAEDALHVTLASKGRHHVAQYLPAGEMERLL-QSAGKGGAGKGGDEGDFAANRLEAETNVGMQLLKKQGWNEGQGLGAEGKTGVKAPVNMQTTGGEGVGVGGGGEEEAGEEGGDDFENYRRRMMLAYRFRPNPLNNPRRAYY 528
            ++D K   L   LP  MDA    QL++QK +Q LE ++REAA  +A+                 G+   +  EL++ER   Y +LA  + K + E + +     E+  A GGV DGGTWEHRKRAKEML+TAE AL+VTL +KG HH+ QYLP  E+ER L +S       +   E DF  N+L AE N+G Q+LKK GW EG+GLG EG+     PVNM           G  E     EG ++FE YR+RMMLAYRFRPNPLNNPRR+YY
Sbjct:  837 RRDAKSAGL--ALPETMDADQEEQLRQQKEMQRLEARVREAAARQAMPGAGVAAAAAAAGGKPEGEAERRMRELYEERLREYGDLATGDEKEEEERDTV-----EDAEATGGVIDGGTWEHRKRAKEMLKTAEGALNVTLQAKGAHHMGQYLPKDELERFLKKSGKAAKGEEAEAEEDFEKNKL-AEDNIGFQMLKKAGWTEGKGLGKEGEGAA-VPVNMAAG--ADGAGVGVKETHEVTEGDNEFEQYRKRMMLAYRFRPNPLNNPRRSYY 1097          
BLAST of EWM24726.1 vs. NCBI_GenBank
Match: gi|926637379|ref|XP_013784662.1| (PREDICTED: SURP and G-patch domain-containing protein 1-like [Limulus polyphemus])

HSP 1 Score: 161.384 bits (407), Expect = 1.369e-39
Identity = 154/551 (27.95%), Postives = 247/551 (44.83%), Query Frame = 0
Query:    4 SQQYYPPSSAPPPSPPQ-QPQQQEEYDPLAATS-SQANEGGPPGAYDPLGAPPPPPPPPPSNTPAPTNIYADAQGSFIERFAQMKEEKER--EDK----SLQEAERQVKALKEAHARRVAAENQSQRKRKGGRSGGVMMKRRGGAGTVASVFSMEDDEDEEGDEE-------GKKGQLEAGEEGGPQPPKRSRWASEGEKDVEHGEERMTEEMEAKIRALAAWKVKNPERG-SQLEEERRGQPGTAAVAKKPKR-NRWGPESGVPPSAPPSAPPSLPPSLPPSTRKKDGKKNALDEYLPTVMDAAAMTQLQEQKRIQALEKKIREAARLKALAEGGKEGGKEVELFQERALYYEELAEKEGKGQSEGEAIRAIEAENRRAAGGV---------EDGGTWEHRKRAKEMLQTAEDALHVTLASKGRHHVAQYLPAGEMERLLQSAGKGGAGKGGDEGDFAANRLEAETNVGMQLLKKQGWNEGQGLGAEGKTGVKAPVNMQTTGGEGVGVGGGGEEEAGEEGGDDFENYRRRMMLAYRFRPNPLNNPRRAYY 528
            ++ ++   +    S P  Q   Q E  P+A T+ S  N      +++              + PA  +++ +  GSF+ERF Q++ EK++  +DK    S+  A    K LK +    +  +N+ +   +  R                 V S+ED++  +  E          +G  EA        P  +   ++     ++  +R+ E  +AK RA A+  +K   +  S+   +      +    +K KR +RWGP+    P+  P     L   +             ++ + P  +           K  Q L   I+ A ++    +   E  K++E  ++ ++ Y+ +  K+ +             E  R AG V          +GGTWEH+KRA EM +T   A  +T   KG+HH+  +LP  E+ER ++       G+  D  D+   +L+ E N+G Q+L+K GW EGQGLGA+G +G+ APVN  T   E  G G G  EE    G D++E YR+RMMLAYRFRPNPLNNPRR YY
Sbjct:   74 TETFHQTCNIKSTSLPSGQDSTQHELAPVAMTNISNTNTVVANVSFNT------SNQSDKLHVPAAGDLFKN-DGSFLERFKQLQAEKDKPGDDKTKGISMILAPNTSKVLKPSSVVDILDDNEEESTVEKDR-----------------VSSLEDNKSCQAVERVAISVAVNGQGAEEAARTANIDNPAFNFLNNKQSFTYKYFLQRVKELTQAKKRAEASGSIKTEGKSRSEFNSDSDSNSNSDEPKRKKKRLSRWGPQDKTLPA--PGVAGVLTTGI-------------MNSHFPEFV-----------KHDQGL---IKYAVQVFGRTDLTLEQWKQLEDQRKMSVLYQMMEAKQKQN------------EQLRKAGKVRYDYDSDEETEGGTWEHKKRAVEMEKTKAVAEELTEFGKGKHHIGDFLPPDELERFMEKWDAMKEGRAPDLSDYKDFKLK-EDNIGFQMLQKLGWTEGQGLGADG-SGIVAPVNKATAPVEKAGFGQGRPEEVSV-GDDEYEAYRKRMMLAYRFRPNPLNNPRRPYY 556          
BLAST of EWM24726.1 vs. NCBI_GenBank
Match: gi|1101360444|ref|XP_018906530.1| (PREDICTED: R3H domain-containing protein 1-like [Bemisia tabaci])

HSP 1 Score: 164.081 bits (414), Expect = 2.288e-39
Identity = 113/306 (36.93%), Postives = 158/306 (51.63%), Query Frame = 0
Query:  237 KKPKRNRWGPES-----GVPPSAPPSAPPSLPPSLPPSTRKKDGKKNALDEYLPTVMDAAAMTQLQEQKRIQALEKKIREAARLKALAEGGKEGGKEVELFQERALYYEELAEKEGKGQSEGEAIRAIEAENRRAAGGVE---------DGGTWEHRKRAKEMLQTAEDALHVTLASKGRHHVAQYLPAGEMERLLQSAGKGGAGKGGDEGDFAANRLEAETNVGMQLLKKQGWNEGQGLGAEGKTGVKAPVNMQTTGGEGVGVGGGGEEEAGEEGGDDFENYRRRMMLAYRFRPNPLNNPRRAYY 528
            KK +R+RW PE        P   P  A P  PP+L P    KD         LP V  + AM   Q Q+R  AL +  R++     L+E   E  K+ E   +  L Y+++  K              E E  RAAG  +         +GGTWEH+ R  EM+ T   A  +T  +KG+HH+  +LP  E+ER ++       G+  D  D+   +L  E N+G Q+L+K GW+EG+GLG++G +G+  PVN  ++  E  G+G     E    G D+++ YR+RMMLAYRFRPNPLNNPRR YY
Sbjct:  950 KKKRRSRWAPEDCKVNLSTPTLLPTGAVP--PPTLTPIINTKD---------LPGV--SGAMIS-QVQRRDPALLQYARQSFGTINLSE---EDWKKCEDHYKINLLYQDMLRKRE------------EIEKLRAAGKFKYEYDSDEETEGGTWEHKLRRDEMVATQLWADELTEKAKGKHHIGDFLPPDELERFMEKYNALKEGREPDLSDYKEFKLR-EDNIGFQMLQKLGWSEGKGLGSDG-SGIVDPVNKASSRMENQGLGVEKPAEVNR-GDDEYDAYRKRMMLAYRFRPNPLNNPRRPYY 1223          
BLAST of EWM24726.1 vs. NCBI_GenBank
Match: gi|449679683|ref|XP_002158499.2| (PREDICTED: SURP and G-patch domain-containing protein 1-like [Hydra vulgaris])

HSP 1 Score: 152.91 bits (385), Expect = 7.169e-39
Identity = 71/157 (45.22%), Postives = 105/157 (66.88%), Query Frame = 0
Query:  372 DGGTWEHRKRAKEMLQTAEDALHVTLASKGRHHVAQYLPAGEMERLLQSAGKGGAGKGGDEGDFAANRLEAETNVGMQLLKKQGWNEGQGLGAEGKTGVKAPVNMQTTGGEGVGVGGGGEEEAGEEGGDDFENYRRRMMLAYRFRPNPLNNPRRAYY 528
            +GGTWEH+KR +EM++T E A  +T  +KG+HH++ +LP  E+E+ L+       G+  D  D+A  +++ E N+G ++L+K GW EG+GLG++G  G+  P+N      +  G+G     E  ++  DDFE YR+RMMLAY+FRPNPLNNPRR YY
Sbjct:  134 EGGTWEHKKRHQEMMKTLEWARDLTENAKGKHHLSDFLPPEELEKFLEKVKAVKEGREADFSDYAKYKIQ-EDNIGFKMLQKAGWKEGEGLGSKG-DGIVQPINKGKVSFDQSGIGVEKVHEV-QQDDDDFEVYRKRMMLAYKFRPNPLNNPRRPYY 287          
BLAST of EWM24726.1 vs. NCBI_GenBank
Match: gi|762141192|ref|XP_011453777.1| (PREDICTED: formin-like protein 20 [Crassostrea gigas])

HSP 1 Score: 159.844 bits (403), Expect = 4.910e-38
Identity = 111/309 (35.92%), Postives = 161/309 (52.10%), Query Frame = 0
Query:  224 EERRGQPGTAAVAKKPKRNRWGPESGVPPSAPPSAP-PSLPPSLPPSTRKKDGKKNALDEYLPTVMDAAAMTQLQEQKRIQALEKKIREAARLKALAEGGKEGGKEVELFQERALYYEELAEKEGKGQSEGEAIRAIEAENRRAAGGVED--GGTWEHRKRAKEMLQTAEDALHVTLASKGRHHVAQYLPAGEMERLLQSAGKGGAGKGGDEGDFAANRLEAETNVGMQLLKKQGWNEGQGLGAEGKTGVKAPVNMQTTGGEGVGVGGGGEEEAGEEGGDD-FENYRRRMMLAYRFRPNPLNNPRRAYY 528
            EE  G+  + +  K+ KR+RWGP+   P   P   P P +  S PP    +D  +  +       +    + Q++ Q+ +  + + I        LA+      K+VE   E AL  E++A              + +  N+      ED  GGTWEH+ R  EM  T + A  +T A+KG+H +  +LP  E+ER +++      G+  D  D+   +L  + N+G Q+L+K GW EG+GLG+EG+ G+K PVN  +   EG GVG   E  A  E  DD F+ YR+RMMLAYRFRPNPLNNPRR YY
Sbjct:  728 EEMDGKSASGSKMKRKKRSRWGPQDDQPQVPPVGVPIPHVVQSRPPQVTLQDFARKMVGS---DTLSEDQIKQIRHQQEMNMMYELI--------LAK------KKVE---EAALMEEQMASMSAA---------SFKKVNKYEYDSDEDIEGGTWEHKNRTAEMEATRDWAEALTEANKGKHFIGDFLPPDELERFMETFRALKEGREPDLSDYKDFKLTCD-NLGYQMLQKLGWKEGEGLGSEGQ-GIKNPVNKGSVSVEGRGVGT--ERPAALEKDDDEFDAYRKRMMLAYRFRPNPLNNPRRPYY 1003          
BLAST of EWM24726.1 vs. NCBI_GenBank
Match: gi|405974767|gb|EKC39389.1| (Splicing factor 4 [Crassostrea gigas])

HSP 1 Score: 159.844 bits (403), Expect = 5.815e-38
Identity = 111/309 (35.92%), Postives = 161/309 (52.10%), Query Frame = 0
Query:  224 EERRGQPGTAAVAKKPKRNRWGPESGVPPSAPPSAP-PSLPPSLPPSTRKKDGKKNALDEYLPTVMDAAAMTQLQEQKRIQALEKKIREAARLKALAEGGKEGGKEVELFQERALYYEELAEKEGKGQSEGEAIRAIEAENRRAAGGVED--GGTWEHRKRAKEMLQTAEDALHVTLASKGRHHVAQYLPAGEMERLLQSAGKGGAGKGGDEGDFAANRLEAETNVGMQLLKKQGWNEGQGLGAEGKTGVKAPVNMQTTGGEGVGVGGGGEEEAGEEGGDD-FENYRRRMMLAYRFRPNPLNNPRRAYY 528
            EE  G+  + +  K+ KR+RWGP+   P   P   P P +  S PP    +D  +  +       +    + Q++ Q+ +  + + I        LA+      K+VE   E AL  E++A              + +  N+      ED  GGTWEH+ R  EM  T + A  +T A+KG+H +  +LP  E+ER +++      G+  D  D+   +L  + N+G Q+L+K GW EG+GLG+EG+ G+K PVN  +   EG GVG   E  A  E  DD F+ YR+RMMLAYRFRPNPLNNPRR YY
Sbjct:  752 EEMDGKSASGSKMKRKKRSRWGPQDDQPQVPPVGVPIPHVVQSRPPQVTLQDFARKMVGS---DTLSEDQIKQIRHQQEMNMMYELI--------LAK------KKVE---EAALMEEQMASMSAA---------SFKKVNKYEYDSDEDIEGGTWEHKNRTAEMEATRDWAEALTEANKGKHFIGDFLPPDELERFMETFRALKEGREPDLSDYKDFKLTCD-NLGYQMLQKLGWKEGEGLGSEGQ-GIKNPVNKGSVSVEGRGVGT--ERPAALEKDDDEFDAYRKRMMLAYRFRPNPLNNPRRPYY 1027          
BLAST of EWM24726.1 vs. NCBI_GenBank
Match: gi|585186300|ref|XP_006744643.1| (PREDICTED: SURP and G-patch domain-containing protein 1 [Leptonychotes weddellii])

HSP 1 Score: 150.599 bits (379), Expect = 2.569e-37
Identity = 105/308 (34.09%), Postives = 156/308 (50.65%), Query Frame = 0
Query:  228 GQPGTAAVAKKPKRNRWGPESG---VPPSAPPSAPPSLPPSLPPSTRKKDG----KKNALDEYLPTVMDAAAMTQLQEQKRIQALEKKIREAARLKALAEGGKEGGKEVELFQERALYYEELAEKEGKGQSEGEAIRAIEAENRRAAGGVEDGGTWEHRKRAKEMLQTAEDALHVTLASKGRHHVAQYLPAGEMERLLQSAGKGGAGKGGDEGDFAANRLEAETNVGMQLLKKQGWNEGQGLGAEGKTGVKAPVNMQTTGGEGVGVGGGGEEEAGEEGGDDFENYRRRMMLAYRFRPNPLNNPRRAYY 528
            G+P T A  KK +++RWGPE     +PP+          PS P S +   G    K   +     T +  A   QL+EQ+ +Q +   I +  R            ++++L  E+AL      ++   G    E + +             + GTWEH+ R  EM +T E A  +T   +G+H +  +LP  E+E+ +++      G+  D  ++   +L  E N+G Q+L K GW EG GLG+EG+ G+K PVN  TT  +G G G     E  +E  D++E +R+RMMLAYRFRPNPLNNPRR YY
Sbjct:   78 GKPTTTATVKKKRKSRWGPEEDKVELPPAELVQRDVDASPS-PLSVQDLKGLGYEKGKPVGLVGVTELSDAQKKQLKEQQEMQQMYDMIMQHKR----------AMQDMQLLWEKAL------QQHQHGYDSDEEVDS-------------ELGTWEHQLRRMEMDKTREWAEQLTKMGRGKHFIGDFLPPDELEKFMETFKALKEGREPDYSEYKEFKLTVE-NIGYQMLMKMGWKEGDGLGSEGQ-GIKNPVNKGTTTVDGAGFGIDRPAELSKED-DEYEAFRKRMMLAYRFRPNPLNNPRRPYY 352          
BLAST of EWM24726.1 vs. NCBI_GenBank
Match: gi|1048451616|ref|XP_017497755.1| (PREDICTED: SURP and G-patch domain-containing protein 1 [Manis javanica])

HSP 1 Score: 148.288 bits (373), Expect = 5.612e-36
Identity = 103/308 (33.44%), Postives = 155/308 (50.32%), Query Frame = 0
Query:  228 GQPGTAAVAKKPKRNRWGPESG---VPPSAPPSAPPSLPPSLPPSTRKKDG----KKNALDEYLPTVMDAAAMTQLQEQKRIQALEKKIREAARLKALAEGGKEGGKEVELFQERALYYEELAEKEGKGQSEGEAIRAIEAENRRAAGGVEDGGTWEHRKRAKEMLQTAEDALHVTLASKGRHHVAQYLPAGEMERLLQSAGKGGAGKGGDEGDFAANRLEAETNVGMQLLKKQGWNEGQGLGAEGKTGVKAPVNMQTTGGEGVGVGGGGEEEAGEEGGDDFENYRRRMMLAYRFRPNPLNNPRRAYY 528
            G+P   A  K+ +++RWGPE     +PP+          PS P S +   G    K   +     T +  A   QL+EQ+ +Q +   I +  R            ++++L  E+AL      ++   G    E + +             + GTWEH+ R  EM +T E A  +T   +G+H +  +LP  E+E+ +++      G+  D  ++   +L  E N+G Q+L K GW EG GLG+EG+ G+K PVN  TT  +G G G     E  +E  D++E +R+RMMLAYRFRPNPLNNPRR YY
Sbjct:  122 GKPAATATVKRKRKSRWGPEEDKVELPPAELVQKDVDASPS-PLSVQDLKGLGYEKGKPVGLVGVTELSDAQKKQLKEQQEMQQMYDMIMQHKR----------AMQDMQLLWEKAL------QQHQHGYDSDEEVDS-------------ELGTWEHQLRRMEMDKTREWAEQLTQMGRGKHFIGDFLPPDELEKFMETFKALKEGREPDYSEYKEFKLTVE-NIGYQMLMKMGWKEGDGLGSEGQ-GIKNPVNKGTTTVDGAGFGIDRPAELSKED-DEYEAFRKRMMLAYRFRPNPLNNPRRPYY 396          
BLAST of EWM24726.1 vs. NCBI_GenBank
Match: gi|1147379954|ref|XP_020039309.1| (SURP and G-patch domain-containing protein 1 isoform X1 [Castor canadensis])

HSP 1 Score: 152.14 bits (383), Expect = 6.034e-36
Identity = 102/307 (33.22%), Postives = 154/307 (50.16%), Query Frame = 0
Query:  228 GQPGTAAVAKKPKRNRWGPESGVPPSAPPSAPPSLPPSLPPSTRKKDGKKNALDEYLP------TVMDAAAMTQLQEQKRIQALEKKIREAARLKALAEGGKEGGKEVELFQERALYYEELAEKEGKGQSEGEAIRAIEAENRRAAGGVEDGGTWEHRKRAKEMLQTAEDALHVTLASKGRHHVAQYLPAGEMERLLQSAGKGGAGKGGDEGDFAANRLEAETNVGMQLLKKQGWNEGQGLGAEGKTGVKAPVNMQTTGGEGVGVGGGGEEEAGEEGGDDFENYRRRMMLAYRFRPNPLNNPRRAYY 528
            G+P +    K+ +++RWGPE       P    P    + P     +D K    ++  P      T +  A   QL+EQ+ +Q +   I +  R            ++V+L  E+AL      ++   G    E + +             + GTWEH+ R  EM +T E A  +T   +G+H +  +LP  E+ER +++      G+  D  ++   +L  E N+G Q+L K GW EG+GLG+EG+ G+K PVN  TT  +G G G     E  +E  D++E +R+RMMLAYRFRPNPLNNPRR YY
Sbjct:  368 GKPASTTTVKRKRKSRWGPEEDKVELPPAELVPRDVDAAPSPLSVQDLKGLGYEKGKPVGLVGVTELSEAQKKQLKEQQEMQQMYDMIMQHKR----------AMQDVQLLWEKAL------QQHQHGYDSDEEVDS-------------ELGTWEHQLRRMEMDKTREWAEQLTKMGRGKHFIGDFLPPDELERFMETFKALKEGREPDYSEYKEFKLTVE-NIGYQMLVKMGWKEGEGLGSEGQ-GIKNPVNKGTTTVDGAGFGIDRPAELSKED-DEYEAFRKRMMLAYRFRPNPLNNPRRPYY 642          
The following BLAST results are available for this feature:
BLAST of EWM24726.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106261|gb|EWM24726.1|0.000e+0100.00splicing factor 4 [Nannochloropsis gaditana][more]
gi|298713305|emb|CBJ27001.1|1.626e-4545.96conserved unknown protein [Ectocarpus siliculosus][more]
gi|926637379|ref|XP_013784662.1|1.369e-3927.95PREDICTED: SURP and G-patch domain-containing prot... [more]
gi|1101360444|ref|XP_018906530.1|2.288e-3936.93PREDICTED: R3H domain-containing protein 1-like [B... [more]
gi|449679683|ref|XP_002158499.2|7.169e-3945.22PREDICTED: SURP and G-patch domain-containing prot... [more]
gi|762141192|ref|XP_011453777.1|4.910e-3835.92PREDICTED: formin-like protein 20 [Crassostrea gig... [more]
gi|405974767|gb|EKC39389.1|5.815e-3835.92Splicing factor 4 [Crassostrea gigas][more]
gi|585186300|ref|XP_006744643.1|2.569e-3734.09PREDICTED: SURP and G-patch domain-containing prot... [more]
gi|1048451616|ref|XP_017497755.1|5.612e-3633.44PREDICTED: SURP and G-patch domain-containing prot... [more]
gi|1147379954|ref|XP_020039309.1|6.034e-3633.22SURP and G-patch domain-containing protein 1 isofo... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5965rna5965Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications