EWM24731.1, cds5944 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24731.1 vs. NCBI_GenBank
Match: gi|585106267|gb|EWM24731.1| (Ankyrin repeat-containing domain protein [Nannochloropsis gaditana]) HSP 1 Score: 820.846 bits (2119), Expect = 0.000e+0 Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 0
Query: 1 MLSIDHPATSVLLERVLASNAIKEYDTAAIISRLTSSPPISLDEVNYQDEQGRSPLGVAVTREGQSDLVKALVEEGNASLGLRDARLRTPLLLASEFNQTSNVLYLLKKLQAQNNKWRLADERDCFRRGPLHYMCKHWNVEGVQALVSVARAQASDVQNPENGNSSSVLSLLVNEKTSSGETPLFWLAQSIADTNKKSKEKRFERAEAHDHTDEAVAHCHDDKASTNDILEIARLLVGAGAEPRAGNALGQSPATLVNQMRARAKEGRVEELKEGLQALFLAAEGKCEDEEAWEVKKEDVRGASGVAVEASRDSPTGSSSTLPGVSQGPQPCRNSLASLPARREGSSATLSPGGVGLVRALGGQTNGRQGAAGGGRGPGGAVGKKLRIKMRAPTGEQDAKQDRI 404
MLSIDHPATSVLLERVLASNAIKEYDTAAIISRLTSSPPISLDEVNYQDEQGRSPLGVAVTREGQSDLVKALVEEGNASLGLRDARLRTPLLLASEFNQTSNVLYLLKKLQAQNNKWRLADERDCFRRGPLHYMCKHWNVEGVQALVSVARAQASDVQNPENGNSSSVLSLLVNEKTSSGETPLFWLAQSIADTNKKSKEKRFERAEAHDHTDEAVAHCHDDKASTNDILEIARLLVGAGAEPRAGNALGQSPATLVNQMRARAKEGRVEELKEGLQALFLAAEGKCEDEEAWEVKKEDVRGASGVAVEASRDSPTGSSSTLPGVSQGPQPCRNSLASLPARREGSSATLSPGGVGLVRALGGQTNGRQGAAGGGRGPGGAVGKKLRIKMRAPTGEQDAKQDRI
Sbjct: 1 MLSIDHPATSVLLERVLASNAIKEYDTAAIISRLTSSPPISLDEVNYQDEQGRSPLGVAVTREGQSDLVKALVEEGNASLGLRDARLRTPLLLASEFNQTSNVLYLLKKLQAQNNKWRLADERDCFRRGPLHYMCKHWNVEGVQALVSVARAQASDVQNPENGNSSSVLSLLVNEKTSSGETPLFWLAQSIADTNKKSKEKRFERAEAHDHTDEAVAHCHDDKASTNDILEIARLLVGAGAEPRAGNALGQSPATLVNQMRARAKEGRVEELKEGLQALFLAAEGKCEDEEAWEVKKEDVRGASGVAVEASRDSPTGSSSTLPGVSQGPQPCRNSLASLPARREGSSATLSPGGVGLVRALGGQTNGRQGAAGGGRGPGGAVGKKLRIKMRAPTGEQDAKQDRI 404
BLAST of EWM24731.1 vs. NCBI_GenBank
Match: gi|1069520736|ref|XP_018146224.1| (ankyrin repeat-containing protein [Pochonia chlamydosporia 170] >gi|1032862914|gb|OAQ69687.1| ankyrin repeat-containing protein [Pochonia chlamydosporia 170]) HSP 1 Score: 62.7734 bits (151), Expect = 7.017e-7 Identity = 67/227 (29.52%), Postives = 106/227 (46.70%), Query Frame = 0
Query: 44 EVNYQDEQGRSPLGVAVTREGQSDLVKALVEEGNASLGLRDARLRTPLLLASEFNQTSNVLYLLKKLQAQNNKWRLADERDCFRRGPLHYMCKHWNVEGVQALVSV--ARAQASDV-------QNPENGNSSSVLSLL-------VNEKTSSGETPLFWLAQSIADTNKKSKEKRFERAEAHDHTDEAVAHCHDDKASTNDILEIARLLVGA-GAEPRAGNALGQSP 253
V+ +D+ G +PL A + G + + L++ GNA + ++ A LRTPLLLA+ + LL K A N ADE C PL ++ NV+ VQ L++ A D + ENG+ +VL LL ++ K +G T L+W A+ +T++ E+ +AH +A A+ N I +LL+G GA+ A + G+ P
Sbjct: 1042 HVDTKDQNGETPLSWAAS-NGHHAVAELLIDTGNADVNVKGAYLRTPLLLAACNGHIAMAKLLLDKGNADINA---ADEGGC---TPLSLAAQNGNVDIVQLLLNTGGVNVNAKDTFGGTALSRAAENGH-PAVLKLLLDTGNIDIDSKDVNGWTALWWAAE---NTHEAIVEQLLHTGKAHADVKDAYGRTPLWWAAQNGHAAIVKLLLGVGGADVNAKDVYGRIP 1257 The following BLAST results are available for this feature:
BLAST of EWM24731.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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