EWM24741.1, cds5932 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24741.1 vs. NCBI_GenBank
Match: gi|585106281|gb|EWM24741.1| (nascent polypeptide-associated complex subunit alpha [Nannochloropsis gaditana]) HSP 1 Score: 426.402 bits (1095), Expect = 7.315e-151 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
Query: 1 MLPKPHARTSKPMKQEAFQEFSNRTKMVEEHEPENPKVEEEGSEEEEEEEESEEEGEETGAGRGGKQSRSEKKSRKAVQKLGMKPLPGIARVTVKKSKNILFVIGQPDVYKSPFSDTYIVFGEAKLEDLGAQAQSAAAAQFSREPTGMPQGLGGGGGGGAGAPVVEEEGEVDETGVEAKDIELVMSQAACSRARAVGALKKNDGDIVNAIMELTV 215
MLPKPHARTSKPMKQEAFQEFSNRTKMVEEHEPENPKVEEEGSEEEEEEEESEEEGEETGAGRGGKQSRSEKKSRKAVQKLGMKPLPGIARVTVKKSKNILFVIGQPDVYKSPFSDTYIVFGEAKLEDLGAQAQSAAAAQFSREPTGMPQGLGGGGGGGAGAPVVEEEGEVDETGVEAKDIELVMSQAACSRARAVGALKKNDGDIVNAIMELTV
Sbjct: 1 MLPKPHARTSKPMKQEAFQEFSNRTKMVEEHEPENPKVEEEGSEEEEEEEESEEEGEETGAGRGGKQSRSEKKSRKAVQKLGMKPLPGIARVTVKKSKNILFVIGQPDVYKSPFSDTYIVFGEAKLEDLGAQAQSAAAAQFSREPTGMPQGLGGGGGGGAGAPVVEEEGEVDETGVEAKDIELVMSQAACSRARAVGALKKNDGDIVNAIMELTV 215
BLAST of EWM24741.1 vs. NCBI_GenBank
Match: gi|532021153|gb|AGT63357.1| (NAC transcription factor 1 [Salvia miltiorrhiza]) HSP 1 Score: 194.512 bits (493), Expect = 1.471e-59 Identity = 99/160 (61.88%), Postives = 124/160 (77.50%), Query Frame = 0
Query: 55 EGEETGAGRGGKQSRSEKKSRKAVQKLGMKPLPGIARVTVKKSKNILFVIGQPDVYKSPFSDTYIVFGEAKLEDLGAQAQSAAAAQFSREPTGMPQGLGGGGGGGAGAPVVEEEGEVDETGVEAKDIELVMSQAACSRARAVGALKKNDGDIVNAIMELT 214
EG+E +GR KQSRSEKKSRKA+ KLGMKP+PG++RVTVKKSKNILFVI +PDV+KSP SDTY++FGEAK+EDL +Q Q+ AA QF + P + V++++ +VDETGVE KDIELVM+QA SRARAV AL++ +GDIV+AIMELT
Sbjct: 43 EGQEDASGRS-KQSRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPNSDTYVIFGEAKIEDLSSQLQTQAAEQF-KAP-----NISQAAPKAEPTTVIQDDEDVDETGVEPKDIELVMTQAGVSRARAVKALREANGDIVSAIMELT 195
BLAST of EWM24741.1 vs. NCBI_GenBank
Match: gi|359481448|ref|XP_003632619.1| (PREDICTED: nascent polypeptide-associated complex subunit alpha-like protein 1 [Vitis vinifera]) HSP 1 Score: 194.126 bits (492), Expect = 2.970e-59 Identity = 100/160 (62.50%), Postives = 124/160 (77.50%), Query Frame = 0
Query: 55 EGEETGAGRGGKQSRSEKKSRKAVQKLGMKPLPGIARVTVKKSKNILFVIGQPDVYKSPFSDTYIVFGEAKLEDLGAQAQSAAAAQFSREPTGMPQGLGGGGGGGAGAPVVEEEGEVDETGVEAKDIELVMSQAACSRARAVGALKKNDGDIVNAIMELT 214
EG++ G+GR KQSRSEKKSRKA+ KLGMK +PG++RVT+KKSKNILFVI +PDV+KSP SDTY++FGEAK+EDL +Q Q+ AA QF + P P A VV+++ EVDETGVE KDI+LVM+QA SR++AV ALK DGDIV+AIMELT
Sbjct: 49 EGQDDGSGRS-KQSRSEKKSRKAMLKLGMKTIPGVSRVTIKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQF-KAPNVHP-----AAAQPETAAVVQDDEEVDETGVEPKDIDLVMTQAGVSRSKAVKALKAADGDIVSAIMELT 201
BLAST of EWM24741.1 vs. NCBI_GenBank
Match: gi|568856861|ref|XP_006481991.1| (PREDICTED: nascent polypeptide-associated complex subunit alpha-like protein 1 [Citrus sinensis]) HSP 1 Score: 193.741 bits (491), Expect = 3.978e-59 Identity = 103/159 (64.78%), Postives = 123/159 (77.36%), Query Frame = 0
Query: 56 GEETGAGRGGKQSRSEKKSRKAVQKLGMKPLPGIARVTVKKSKNILFVIGQPDVYKSPFSDTYIVFGEAKLEDLGAQAQSAAAAQFSREPTGMPQGLGGGGGGGAGAPVVEEEGEVDETGVEAKDIELVMSQAACSRARAVGALKKNDGDIVNAIMELT 214
G+ G+GR KQSRSEKKSRKA+ KLGMKP+PG++RVTVKKSKNILFVI +PDV+KSP SDTYIVFGEAK+EDL +Q Q+ AA QF + P P G + +V+++ EVDETGVE KDIELVM+QA R+RAV ALK DGDIV+AIMELT
Sbjct: 50 GKGDGSGRS-KQSRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQF-KVP---PPNTGNVASKPESSAMVQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 203
BLAST of EWM24741.1 vs. NCBI_GenBank
Match: gi|747064978|ref|XP_011079101.1| (nascent polypeptide-associated complex subunit alpha-like protein [Sesamum indicum]) HSP 1 Score: 192.2 bits (487), Expect = 1.218e-58 Identity = 101/160 (63.12%), Postives = 123/160 (76.88%), Query Frame = 0
Query: 55 EGEETGAGRGGKQSRSEKKSRKAVQKLGMKPLPGIARVTVKKSKNILFVIGQPDVYKSPFSDTYIVFGEAKLEDLGAQAQSAAAAQFSREPTGMPQGLGGGGGGGAGAPVVEEEGEVDETGVEAKDIELVMSQAACSRARAVGALKKNDGDIVNAIMELT 214
EG+E +GR KQSRSEKKSRKA+ KLGMKP+ G++RVTVKKSKNILFVI +PDV+KSP SDTY++FGEAK+EDL +Q Q+ AA QF + P + AP+ +++ +VDETGVE KDIELVM+QA SRARAV ALK DGDIV+AIMELT
Sbjct: 44 EGQEDASGRS-KQSRSEKKSRKAMLKLGMKPILGVSRVTVKKSKNILFVISKPDVFKSPNSDTYVIFGEAKIEDLSSQLQTQAAEQF-KAP-----NVSNVVPKAEPAPLPQDDEDVDETGVEPKDIELVMTQAGVSRARAVKALKDADGDIVSAIMELT 196
BLAST of EWM24741.1 vs. NCBI_GenBank
Match: gi|763800885|gb|KJB67840.1| (hypothetical protein B456_010G214300 [Gossypium raimondii]) HSP 1 Score: 192.586 bits (488), Expect = 1.418e-58 Identity = 104/164 (63.41%), Postives = 125/164 (76.22%), Query Frame = 0
Query: 51 ESEEEGEETGAGRGGKQSRSEKKSRKAVQKLGMKPLPGIARVTVKKSKNILFVIGQPDVYKSPFSDTYIVFGEAKLEDLGAQAQSAAAAQFSREPTGMPQGLGGGGGGGAGAPVVEEEGEVDETGVEAKDIELVMSQAACSRARAVGALKKNDGDIVNAIMELT 214
E EGE G GR KQSRSEKKSRKA+ KLGMKP+PG++RVTVKKSKNILFVI +PDV+KSP SDTY++FGEAK+EDL +Q Q+ AA QF + P + Q + A V+++ EVDETGVE KDIELVM+QA SR++AV ALK DGDIV+AIMELT
Sbjct: 50 EGHHEGEGDGTGRS-KQSRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDLSSQLQTRAAEQF-KAP-DLSQVISKPESSTA----VQDDEEVDETGVEPKDIELVMTQAGVSRSKAVKALKAADGDIVSAIMELT 206
BLAST of EWM24741.1 vs. NCBI_GenBank
Match: gi|567875727|ref|XP_006430453.1| (hypothetical protein CICLE_v10012803mg [Citrus clementina] >gi|557532510|gb|ESR43693.1| hypothetical protein CICLE_v10012803mg [Citrus clementina] >gi|641838438|gb|KDO57381.1| hypothetical protein CISIN_1g028762mg [Citrus sinensis]) HSP 1 Score: 191.815 bits (486), Expect = 2.299e-58 Identity = 102/159 (64.15%), Postives = 122/159 (76.73%), Query Frame = 0
Query: 56 GEETGAGRGGKQSRSEKKSRKAVQKLGMKPLPGIARVTVKKSKNILFVIGQPDVYKSPFSDTYIVFGEAKLEDLGAQAQSAAAAQFSREPTGMPQGLGGGGGGGAGAPVVEEEGEVDETGVEAKDIELVMSQAACSRARAVGALKKNDGDIVNAIMELT 214
G+ G+GR KQSRSEKKSRKA+ KLGMKP+PG++RVTVKKSKNILFVI +PDV+KSP SDTYIVFGEAK+EDL +Q Q+ AA QF + P P G + + +++ EVDETGVE KDIELVM+QA R+RAV ALK DGDIV+AIMELT
Sbjct: 50 GKGDGSGRS-KQSRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQF-KVP---PPNTGNVASKPESSAMAQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 203
BLAST of EWM24741.1 vs. NCBI_GenBank
Match: gi|567875729|ref|XP_006430454.1| (hypothetical protein CICLE_v10012803mg [Citrus clementina] >gi|557532511|gb|ESR43694.1| hypothetical protein CICLE_v10012803mg [Citrus clementina]) HSP 1 Score: 190.274 bits (482), Expect = 4.758e-58 Identity = 102/159 (64.15%), Postives = 122/159 (76.73%), Query Frame = 0
Query: 56 GEETGAGRGGKQSRSEKKSRKAVQKLGMKPLPGIARVTVKKSKNILFVIGQPDVYKSPFSDTYIVFGEAKLEDLGAQAQSAAAAQFSREPTGMPQGLGGGGGGGAGAPVVEEEGEVDETGVEAKDIELVMSQAACSRARAVGALKKNDGDIVNAIMELT 214
G+ G+GR KQSRSEKKSRKA+ KLGMKP+PG++RVTVKKSKNILFVI +PDV+KSP SDTYIVFGEAK+EDL +Q Q+ AA QF + P P G + + +++ EVDETGVE KDIELVM+QA R+RAV ALK DGDIV+AIMELT
Sbjct: 32 GKGDGSGRS-KQSRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQF-KVP---PPNTGNVASKPESSAMAQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 185
BLAST of EWM24741.1 vs. NCBI_GenBank
Match: gi|1204926827|ref|XP_021296517.1| (nascent polypeptide-associated complex subunit alpha-like protein 1 [Herrania umbratica]) HSP 1 Score: 191.045 bits (484), Expect = 5.965e-58 Identity = 101/161 (62.73%), Postives = 121/161 (75.16%), Query Frame = 0
Query: 55 EGEETGAGRG-GKQSRSEKKSRKAVQKLGMKPLPGIARVTVKKSKNILFVIGQPDVYKSPFSDTYIVFGEAKLEDLGAQAQSAAAAQFSREPTGMPQGLGGGGGGGAGAPVVEEEGEVDETGVEAKDIELVMSQAACSRARAVGALKKNDGDIVNAIMELT 214
EG G G G KQSRSEKKSRKA+ KLGMKP+PG++RVTVKKSKNILFVI +PDV+KSP SDTY+VFGEAK+EDL +Q Q+ AA QF + P L + + +++ EVDETGVE KDIELVM+QA SR++AV ALK DGDIV+AIMELT
Sbjct: 53 EGHHDGDGSGRSKQSRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVVFGEAKIEDLSSQLQTQAAEQF-KAP-----DLSHVISKPESSTMAQDDEEVDETGVEPKDIELVMTQAGVSRSKAVKALKAADGDIVSAIMELT 207
BLAST of EWM24741.1 vs. NCBI_GenBank
Match: gi|1063527044|ref|XP_007010737.2| (PREDICTED: nascent polypeptide-associated complex subunit alpha-like protein 1 [Theobroma cacao]) HSP 1 Score: 190.66 bits (483), Expect = 7.024e-58 Identity = 101/161 (62.73%), Postives = 122/161 (75.78%), Query Frame = 0
Query: 55 EGEETGAGRG-GKQSRSEKKSRKAVQKLGMKPLPGIARVTVKKSKNILFVIGQPDVYKSPFSDTYIVFGEAKLEDLGAQAQSAAAAQFSREPTGMPQGLGGGGGGGAGAPVVEEEGEVDETGVEAKDIELVMSQAACSRARAVGALKKNDGDIVNAIMELT 214
EG + G G G KQSRSEKKSRKA+ KLGMKP+PG++RVTVKKSKNILFVI +PDV+KSP SDTY+VFGEAK+EDL +Q Q+ AA QF + P L + + +++ EVDETGVE KDIELVM+QA SR++AV ALK DGDIV+AIMELT
Sbjct: 53 EGHQEGDGSGRSKQSRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVVFGEAKIEDLSSQLQTQAAEQF-KAP-----DLSHVISKPESSAMAQDDEEVDETGVEPKDIELVMTQAGVSRSKAVKALKAADGDIVSAIMELT 207 The following BLAST results are available for this feature:
BLAST of EWM24741.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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