EWM24742.1, cds5931 (CDS) Nannochloropsis gaditana

Overview
NameEWM24742.1
Unique Namecds5931
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:176302..176568 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24742.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101682g2.10367.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:176302..176568 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM24742.1 vs. NCBI_GenBank
Match: gi|585106284|gb|EWM24742.1| (hypothetical protein Naga_101682g2 [Nannochloropsis gaditana])

HSP 1 Score: 174.096 bits (440), Expect = 4.860e-55
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 
Query:    1 MPPYPYLMHPSATISPTPPLRSHFSVAFFSLTVWSVCCCASTSAFVLRLPTATPCAKLDTKPLSIHLPFRHATLAAKVGDFVCMTPFP 88
            MPPYPYLMHPSATISPTPPLRSHFSVAFFSLTVWSVCCCASTSAFVLRLPTATPCAKLDTKPLSIHLPFRHATLAAKVGDFVCMTPFP
Sbjct:    1 MPPYPYLMHPSATISPTPPLRSHFSVAFFSLTVWSVCCCASTSAFVLRLPTATPCAKLDTKPLSIHLPFRHATLAAKVGDFVCMTPFP 88
The following BLAST results are available for this feature:
BLAST of EWM24742.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106284|gb|EWM24742.1|4.860e-55100.00hypothetical protein Naga_101682g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5946rna5946Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications