EWM24744.1, cds5929 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24744.1 vs. NCBI_GenBank
Match: gi|585106288|gb|EWM24744.1| (Peptidase C54, partial [Nannochloropsis gaditana]) HSP 1 Score: 642.499 bits (1656), Expect = 0.000e+0 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0 Query: 1 SSLPFDPLLHRPPSVVAADERAAAKALPPPFRPWREGEGAVLLIPLRCVRFHVGRWLGVYVGLWMCVSGFGRTFPPCKHGHCLPPTEPCPPSLPSSVPSSLSLPLSLCPYLLPSLSLGLASLNPDYIPGLLASLQIPHSLGFVGGRPHHAIYFVGAEGGREGGREGGAVVGLDPHTVQVAPGPQGDGDQGGQGGREGGKEGGGEGRKEGGREGGRRRYRPTDEHLRSVQCRTPAMMLAKDLDPSLALGFYLRNEVDFQLFIQHVHALKDTLQRHRLPVPFSVEQAPPEYEGAMMQSLVEEEEHRVEEEEEEEEEDLEDDYVVI 323 SSLPFDPLLHRPPSVVAADERAAAKALPPPFRPWREGEGAVLLIPLRCVRFHVGRWLGVYVGLWMCVSGFGRTFPPCKHGHCLPPTEPCPPSLPSSVPSSLSLPLSLCPYLLPSLSLGLASLNPDYIPGLLASLQIPHSLGFVGGRPHHAIYFVGAEGGREGGREGGAVVGLDPHTVQVAPGPQGDGDQGGQGGREGGKEGGGEGRKEGGREGGRRRYRPTDEHLRSVQCRTPAMMLAKDLDPSLALGFYLRNEVDFQLFIQHVHALKDTLQRHRLPVPFSVEQAPPEYEGAMMQSLVEEEEHRVEEEEEEEEEDLEDDYVVI Sbjct: 1 SSLPFDPLLHRPPSVVAADERAAAKALPPPFRPWREGEGAVLLIPLRCVRFHVGRWLGVYVGLWMCVSGFGRTFPPCKHGHCLPPTEPCPPSLPSSVPSSLSLPLSLCPYLLPSLSLGLASLNPDYIPGLLASLQIPHSLGFVGGRPHHAIYFVGAEGGREGGREGGAVVGLDPHTVQVAPGPQGDGDQGGQGGREGGKEGGGEGRKEGGREGGRRRYRPTDEHLRSVQCRTPAMMLAKDLDPSLALGFYLRNEVDFQLFIQHVHALKDTLQRHRLPVPFSVEQAPPEYEGAMMQSLVEEEEHRVEEEEEEEEEDLEDDYVVI 323
BLAST of EWM24744.1 vs. NCBI_GenBank
Match: gi|298712912|emb|CBJ33424.1| (Autophagy-related protein 4 [Ectocarpus siliculosus]) HSP 1 Score: 104.76 bits (260), Expect = 2.689e-21 Identity = 66/183 (36.07%), Postives = 90/183 (49.18%), Query Frame = 0 Query: 111 LLPSLSLGLASLNPDYIPGLLASLQIPHSLGFVGGRPHHAIYFVGAEGGREGGREGGAVVGLDPHTVQVAPGPQGDGDQGGQGGREGGKEGGGEGRKEGGREGGRRRYRPTDEHLRSVQCRTPAMMLAKDLDPSLALGFYLRNEVDFQLFIQHVHALKDTLQRHRLPVPFSVEQAPPEYEGAM 293 LL L LGL L+ YIP LL +L++P SLGF+GGRP+HAI+F+GA +G + GLDPHT Q P D +G P++ ++ S+ C++ M +DPSLAL FYL + F+ I+ + P PFSVEQ P+YEG M Sbjct: 382 LLVPLRLGLDELSTGYIPSLLETLRVPQSLGFLGGRPNHAIFFIGA--------QGNTLTGLDPHTTQ----PAADMGEG----------------------------FPSERYVHSLHCQSAVSMDVHRIDPSLALAFYLPDRATFEDLIKRIGETN--------PPPFSVEQTRPDYEGEM 516
BLAST of EWM24744.1 vs. NCBI_GenBank
Match: gi|219129924|ref|XP_002185127.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403306|gb|EEC43259.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 89.7373 bits (221), Expect = 3.172e-16 Identity = 61/204 (29.90%), Postives = 92/204 (45.10%), Query Frame = 0 Query: 120 ASLNPDYIPGLLASLQIPHSLGFVGGRPHHAIYFVGAEGGREGGREGGAVVGLDPHTVQVAPGPQGDGDQGGQGGREGGKEGGGEGRKEGGREGGRRRYRPTDEHLRSVQCRTPAMMLAKDLDPSLALGFYLRNEVDFQLFIQHVHALKDTLQRHRLPVPFSVEQAPPEYEGAMMQSLVEEEEHRVEEEEEEEEEDLEDDYVVI 323 SLN +Y+ L + +P S+G +GGRP A +F GA+ ++G + GLDPHTVQ APG Q R G+ +D++LRS P M +DPS+ALGFY R D + + A + + +P FSV P+Y + L+ + +E E+E D+YV++ Sbjct: 384 TSLNEEYVQSLAHTFSLPQSVGVLGGRPRGARWFYGAQ------KDGSKIFGLDPHTVQTAPGRQT--------ARVNGQASSV--------------VELSDDYLRSCHTTCPEMFPFCKMDPSIALGFYCRTRADLNHVLNSMGAWQK--EHSSIPELFSVLDRAPDYSANVDDLLLGGDSSMMETSGFEDEASDADEYVML 557
BLAST of EWM24744.1 vs. NCBI_GenBank
Match: gi|926613004|ref|XP_013794781.1| (PREDICTED: cysteine protease ATG4B-like [Limulus polyphemus] >gi|926613006|ref|XP_013794782.1| PREDICTED: cysteine protease ATG4B-like [Limulus polyphemus]) HSP 1 Score: 87.4261 bits (215), Expect = 1.365e-15 Identity = 56/153 (36.60%), Postives = 69/153 (45.10%), Query Frame = 0 Query: 115 LSLGLASLNPDYIPGLLASLQIPHSLGFVGGRPHHAIYFVGAEGGREGGREGGAVVGLDPHTVQVAPGPQGDGDQGGQGGREGGKEGGGEGRKEGGREGGRRRYRPTDEHLRSVQCRTPAMMLAKDLDPSLALGFYLRNEVDFQLFIQHVHAL 267 L LGL +NP YI GL + + SLG +GGRP+HA+YF+GA G VV LDPHT Q P D D P+DE S C + M LDPS+AL FY R+E DF + HV+ L Sbjct: 261 LRLGLTDINPLYIKGLKTTFTLKQSLGIIGGRPNHALYFIGAIGNE--------VVFLDPHTTQ--PATVLDTD------------------------------SPSDE---SYHCCYASRMDVSQLDPSIALCFYCRSEADFDNWCNHVYKL 370
BLAST of EWM24744.1 vs. NCBI_GenBank
Match: gi|1210512575|dbj|GAX28432.1| (cysteine protease ATG4 [Fistulifera solaris]) HSP 1 Score: 85.1149 bits (209), Expect = 8.056e-15 Identity = 60/206 (29.13%), Postives = 91/206 (44.17%), Query Frame = 0 Query: 121 SLNPDYIPGLLASLQIPHSLGFVGGRPHHAIYFVGAEGGREGGREGGAVVGLDPHTVQVAPGPQGDGDQGGQGGREGGKEGGGEGRKEGGREGGRRRYRPTDEHLRSVQCRTPAMMLAKDLDPSLALGFYLRNEVDFQLFIQHVHALKDTLQRHRLPVPFSVEQAPPEYEG---AMMQSLVEEEEHRVEEEEEEEEEDLEDDYVVI 323 + N DY+ L + +P S+G +GGRP A YF GA +G + GLDPHTVQ AP + GE +DE+LRS+ P + + +DPS+ LGFY NE D Q + V K + P F+ P+Y + M+ ++ ++ EE++ + EDDYV++ Sbjct: 298 TFNLDYVRALAHTFSLPQSVGVLGGRPRGARYFYGAFS------DGSKIFGLDPHTVQAAP-------------QRASVSINGELSS---------MIDLSDENLRSIHTAYPESISLEKMDPSITLGFYCENERDLQFIFESVQQWK--TENPGSPELFTTANYSPDYAANISSTMKKIMLSSSSLLDTEEDQISD--EDDYVML 471
BLAST of EWM24744.1 vs. NCBI_GenBank
Match: gi|934155763|gb|KPM05940.1| (cysteine protease ATG4B-like protein [Sarcoptes scabiei]) HSP 1 Score: 83.1889 bits (204), Expect = 3.939e-14 Identity = 57/205 (27.80%), Postives = 88/205 (42.93%), Query Frame = 0 Query: 115 LSLGLASLNPDYIPGLLASLQIPHSLGFVGGRPHHAIYFVGAEGGREGGREGGAVVGLDPHTVQVAPGPQGDGDQGGQGGREGGKEGGGEG-RKEGGREGGRRRYRPTDEHLRSVQCRTPAMMLAKDLDPSLALGFYLRNEVDFQLFIQHVHALKDTLQRHRLPVPFSVEQAPPEYEGA---MMQSLVEEEEHRVEEEEEEEEED 315 L LGLA +NP Y L + P +LG +GGRP+HA+YF+G ++ LDPHT Q + D + + RE ++ + R E + S C P + ++DPSL+L F+ + E DF Q + L R P+ F + P+Y G M S + E+ + + E + D Sbjct: 289 LRLGLAEINPIYFKSLKTTFTFPQTLGILGGRPNHALYFIGC--------SDNDLIYLDPHTTQESVDLVDDLSEMLKTDRESIEDFSNDQPRNEFSDDF-------------SYHCDRPYRISINNIDPSLSLCFFCKTEEDFN---QWAYLCLHKLMREEQPL-FEMMNERPKYWGTNNDMNDSTIRTEKDELNDAERTNQID 468
BLAST of EWM24744.1 vs. NCBI_GenBank
Match: gi|224010768|ref|XP_002294341.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220969836|gb|EED88175.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 83.5741 bits (205), Expect = 4.431e-14 Identity = 78/259 (30.12%), Postives = 115/259 (44.40%), Query Frame = 0 Query: 118 GLASL-NPDYIPGLLASLQIPHSLGFVGGRPHHAIYFVGA----------EGGREGGREGGAVVGLDPHTVQVAPGPQGDGDQGGQGGREGGKEGGGEGRKEGGREGGRRRYRPTDEHLRSVQCRTPAMMLAK--------DLDPSLALGFYLRNEVDFQLFIQHVHAL-KDTLQRHRLPVPFSVEQAPPEYE---GAMMQSLV--------EEEEHRVEEEEEEE----------------------EEDLEDDYVVI 323 G+ S+ P Y L L P S+G +GG P HA++F GA +G G+E G GLDPHT QVAP +G + + G E + + + + + D +LRS+ TP A LDPS ALGFY+R+ DF F + AL K+ + ++LP +V + P YE G++M++L+ E E R +E ++ EED +DDYV+I Sbjct: 411 GIQSIPTPTYGSTLAKLLSFPQSVGMLGGTPRHALWFYGADEVDPPTFGDDGKALNGQECGGWYGLDPHTTQVAP-------RGTRTTKYGKDEVSSDDIE---LNNCQWQVQLNDAYLRSLHF-TPTTTHANHQRSIPLSKLDPSCALGFYIRDHSDFVQFTNAIDALSKEHCRPNKLPDIVTVTEKTPNYEVDVGSVMKTLMLCGKGTTKEREGGRGDETCNDDCGGGSDNQLDGFSMDSEEGVLSEEDDDDDYVLI 658
BLAST of EWM24744.1 vs. NCBI_GenBank
Match: gi|1173936891|gb|OQR87768.1| (cysteine protease family C54 [Achlya hypogyna]) HSP 1 Score: 82.0333 bits (201), Expect = 5.798e-14 Identity = 65/202 (32.18%), Postives = 88/202 (43.56%), Query Frame = 0 Query: 90 PPSLPSSVPSSLSLPLSLCPYLLPSLSLGLASLNPDYIPGLLASLQIPHSLGFVGGRPHHAIYFVGAEGGREGGREGGAVVGLDPHTVQVAPGPQGDGDQGGQGGREGGKEGGGEGRKEGGREGGRRRYRPTDEHLRSVQCRTPAMMLAKDLDPSLALGFYLRNEVDFQLFIQHVHALKDTLQRHRLPVPFSVEQAPPEYEG 291 PP+L +S P S S+ ++L L LGL LN YIP L A +P SLG +GG+ H++YFVGA G + LDPHTV P + D PT H R+V +M +DPSLALGFY R+ ++ + AL + H PV +V +A P+Y Sbjct: 195 PPTLDTSAPWSKSV------FILVPLRLGLDKLNEAYIPALTAVFALPQSLGIIGGKRGHSVYFVGARGHQFH--------ILDPHTVH----PTTEVDDSF----------------------------PTATHARTVHSTDHLVMEVDYIDPSLALGFYCRDRSEYADLCARLAALS---REHMCPV--TVAEAKPDYTN 345
BLAST of EWM24744.1 vs. NCBI_GenBank
Match: gi|857977420|emb|CEO96818.1| (hypothetical protein PBRA_005422 [Plasmodiophora brassicae]) HSP 1 Score: 77.7962 bits (190), Expect = 1.602e-12 Identity = 57/213 (26.76%), Postives = 89/213 (41.78%), Query Frame = 0 Query: 111 LLPSLSLGLASLNPDYIPGLLASLQIPHSLGFVGGRPHHAIYFVGAEGGREGGREGGAVVGLDPHTVQVAPGPQGDGDQGGQGGREGGKEGGGEGRKEGGREGGRRRYRPTDEHLRSVQCRTPAMMLAKDLDPSLALGFYLRNEVDFQLFIQHVHALKDTLQRHRLPVPFSVEQAPPEYEGAMMQSLVEEEEHRVEEEEEEEEEDLEDDYVVI 323 +L L LGL LNP Y+ LL + +P SLGF+GGRP ++YFVG +G + ++ LDPHT+ G D+ + GG + + + CR M+ LDP LALGFY+ + + + +K P F + P + HR + + E+E +DD+V++ Sbjct: 189 VLVPLRLGLDDLNPIYMESLLQMMTLPQSLGFIGGRPRSSLYFVGFQGRK--------LLYLDPHTIHDHVGDVTSADENVRFSTGGGGVACADDACV------------PHPQVSTFCCRECRTMMIDQLDPCLALGFYVASADSLDDMWRRLQGMKS-------PTGFDIGDRAPVW-------------HRPASDTQAEQETDDDDFVLL 361
BLAST of EWM24744.1 vs. NCBI_GenBank
Match: gi|802672592|gb|KKA67055.1| (Peptidase [Pristionchus pacificus]) HSP 1 Score: 75.0998 bits (183), Expect = 2.102e-11 Identity = 58/192 (30.21%), Postives = 89/192 (46.35%), Query Frame = 0 Query: 111 LLPSLSLGLASLNPDYIPGLLASLQIPHSLGFVGGRPHHAIYFVGAEGGREGGREGGAVVGLDPHTVQ-----VAPGPQGDGDQGGQGGREGGKEG-GGEGRKEG-----GREGGRRRYRPTDEHLRSVQCRTPAMMLAKDLDPSLALGFYLRNEVDFQLFIQHVHALKD--TLQRHRLPVPFSVEQAPPEY 289 +L L LGL + NP Y+ + A ++P +G +GGRP+HA+YFVG + + ++ LDPH Q A + D G E E G G +E G +G + C T M KD+DPSLALGF+ RN+ +++ + LK+ + PV +E+ PP++ Sbjct: 229 VLIPLRLGLTTTNPLYLRAIQAYFKLPQCVGILGGRPNHALYFVGIKDDK--------LIYLDPHYTQNTLTRSASCASFEKDASIDDGFERATEAVDGMGEEESAWDEPGCDG-------------TFHCPTLLWMDYKDVDPSLALGFFCRNKEEYEDLARR---LKEGAMATEEKFPVFEHIEKRPPKW 396 The following BLAST results are available for this feature:
BLAST of EWM24744.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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