EWM24745.1, cds5927 (CDS) Nannochloropsis gaditana

Overview
NameEWM24745.1
Unique Namecds5927
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:168247..168283 +
Alignment locationCM002467.1:168493..168827 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24745.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101138g2.1646.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:168247..168283 +
CM002467.1supercontigCM002467.1:168493..168827 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24745.1 vs. NCBI_GenBank
Match: gi|585106290|gb|EWM24745.1| (hypothetical protein Naga_101138g2 [Nannochloropsis gaditana])

HSP 1 Score: 243.432 bits (620), Expect = 1.954e-81
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0 
Query:    1 MHSHVKAWREADPRDPDDGGVTTGVEQCLQRLRPRIPRVCVARAGIRLGGRRGFPLPGISRLKEERGPEEGRKGRREGSVGVDWRRRGRGKANGCITPDGGTRVPCHRSQMAGSKGVWNAGTN 123
            MHSHVKAWREADPRDPDDGGVTTGVEQCLQRLRPRIPRVCVARAGIRLGGRRGFPLPGISRLKEERGPEEGRKGRREGSVGVDWRRRGRGKANGCITPDGGTRVPCHRSQMAGSKGVWNAGTN
Sbjct:    1 MHSHVKAWREADPRDPDDGGVTTGVEQCLQRLRPRIPRVCVARAGIRLGGRRGFPLPGISRLKEERGPEEGRKGRREGSVGVDWRRRGRGKANGCITPDGGTRVPCHRSQMAGSKGVWNAGTN 123
The following BLAST results are available for this feature:
BLAST of EWM24745.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106290|gb|EWM24745.1|1.954e-81100.00hypothetical protein Naga_101138g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5942rna5942Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications