EWM24749.1, cds5925 (CDS) Nannochloropsis gaditana

Overview
NameEWM24749.1
Unique Namecds5925
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:159178..159405 +

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Properties
Property NameValue
Protein idEWM24749.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100513g2.7564.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:159178..159405 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24749.1 vs. NCBI_GenBank
Match: gi|585106295|gb|EWM24749.1| (hypothetical protein Naga_100513g2 [Nannochloropsis gaditana])

HSP 1 Score: 155.992 bits (393), Expect = 2.702e-48
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 
Query:    1 MCFNYDVQRWSAEEARSQTKRWEMRGFTWNPCPPTRLRQRRGYGCQGFKCINEERWAITGERGGRLGAYGGIVLI 75
            MCFNYDVQRWSAEEARSQTKRWEMRGFTWNPCPPTRLRQRRGYGCQGFKCINEERWAITGERGGRLGAYGGIVLI
Sbjct:    1 MCFNYDVQRWSAEEARSQTKRWEMRGFTWNPCPPTRLRQRRGYGCQGFKCINEERWAITGERGGRLGAYGGIVLI 75
[Close]
BLAST of EWM24749.1 vs. NCBI_GenBank
Match: gi|553182145|ref|XP_005853685.1| (hypothetical protein NGA_0490200 [Nannochloropsis gaditana CCMP526] >gi|422295374|gb|EKU22673.1| hypothetical protein NGA_0490200 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 147.902 bits (372), Expect = 3.844e-45
Identity = 72/75 (96.00%), Postives = 72/75 (96.00%), Query Frame = 0 
Query:    1 MCFNYDVQRWSAEEARSQTKRWEMRGFTWNPCPPTRLRQRRGYGCQGFKCINEERWAITGERGGRLGAYGGIVLI 75
            MCFNYDVQRWSAEEARSQTKRWEMRGFTWNPCPPTR RQRRGYGCQGFKCINEERWAIT ERGGRLGAYGGI LI
Sbjct:    1 MCFNYDVQRWSAEEARSQTKRWEMRGFTWNPCPPTRPRQRRGYGCQGFKCINEERWAITWERGGRLGAYGGIFLI 75
The following BLAST results are available for this feature:
BLAST of EWM24749.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585106295|gb|EWM24749.1|2.702e-48100.00hypothetical protein Naga_100513g2 [Nannochloropsi... [more]
gi|553182145|ref|XP_005853685.1|3.844e-4596.00hypothetical protein NGA_0490200 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5940rna5940Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications