EWM24748.1, cds5924 (CDS) Nannochloropsis gaditana

Overview
NameEWM24748.1
Unique Namecds5924
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:158619..158661 +
Alignment locationCM002467.1:158896..159137 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24748.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100513g1.7563.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:158619..158661 +
CM002467.1supercontigCM002467.1:158896..159137 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24748.1 vs. NCBI_GenBank
Match: gi|585106294|gb|EWM24748.1| (hypothetical protein Naga_100513g1 [Nannochloropsis gaditana])

HSP 1 Score: 189.504 bits (480), Expect = 6.105e-61
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 
Query:    1 MLCCQPQRVSVQDVCAGREAQSDDEPNGRDATAGDGFRSGRQGIGRTGKKKEMVGALTRRCCSAVSLVLDDLITGKRMSQRKECRLSFMNSRAV 94
            MLCCQPQRVSVQDVCAGREAQSDDEPNGRDATAGDGFRSGRQGIGRTGKKKEMVGALTRRCCSAVSLVLDDLITGKRMSQRKECRLSFMNSRAV
Sbjct:    1 MLCCQPQRVSVQDVCAGREAQSDDEPNGRDATAGDGFRSGRQGIGRTGKKKEMVGALTRRCCSAVSLVLDDLITGKRMSQRKECRLSFMNSRAV 94
The following BLAST results are available for this feature:
BLAST of EWM24748.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106294|gb|EWM24748.1|6.105e-61100.00hypothetical protein Naga_100513g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5939rna5939Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications