EWM24752.1, cds5923 (CDS) Nannochloropsis gaditana

Overview
NameEWM24752.1
Unique Namecds5923
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:155435..155531 +
Alignment locationCM002467.1:155781..155964 +
Alignment locationCM002467.1:156108..156117 +

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Properties
Property NameValue
Protein idEWM24752.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100825g2.6632.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:155435..155531 +
CM002467.1supercontigCM002467.1:155781..155964 +
CM002467.1supercontigCM002467.1:156108..156117 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM24752.1 vs. NCBI_GenBank
Match: gi|585106299|gb|EWM24752.1| (hypothetical protein Naga_100825g2 [Nannochloropsis gaditana])

HSP 1 Score: 189.889 bits (481), Expect = 4.915e-61
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0 
Query:    1 MDKFVRRLSSSAKPNVVREDDRAPPLNKESENDDIPFAIEAPGSRRILYFSDSESDCSQISSECTPQSSLETPVSSISEDLAASRTLNDATRVLRD 96
            MDKFVRRLSSSAKPNVVREDDRAPPLNKESENDDIPFAIEAPGSRRILYFSDSESDCSQISSECTPQSSLETPVSSISEDLAASRTLNDATRVLRD
Sbjct:    1 MDKFVRRLSSSAKPNVVREDDRAPPLNKESENDDIPFAIEAPGSRRILYFSDSESDCSQISSECTPQSSLETPVSSISEDLAASRTLNDATRVLRD 96
[Close]
BLAST of EWM24752.1 vs. NCBI_GenBank
Match: gi|553190093|ref|XP_005855124.1| (hypothetical protein NGA_0101200, partial [Nannochloropsis gaditana CCMP526] >gi|422293933|gb|EKU21233.1| hypothetical protein NGA_0101200, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 169.474 bits (428), Expect = 6.552e-53
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 
Query:    9 SSSAKPNVVREDDRAPPLNKESENDDIPFAIEAPGSRRILYFSDSESDCSQISSECTPQSSLETPVSSISEDLAASRTLNDATRVL 94
            SSSAKPNVVREDDRAPPLNKESENDDIPFAIEAPGSRRILYFSDSESDCSQISSECTPQSSLETPVSSISEDLAASRTLNDATRVL
Sbjct:    1 SSSAKPNVVREDDRAPPLNKESENDDIPFAIEAPGSRRILYFSDSESDCSQISSECTPQSSLETPVSSISEDLAASRTLNDATRVL 86
The following BLAST results are available for this feature:
BLAST of EWM24752.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585106299|gb|EWM24752.1|4.915e-61100.00hypothetical protein Naga_100825g2 [Nannochloropsi... [more]
gi|553190093|ref|XP_005855124.1|6.552e-53100.00hypothetical protein NGA_0101200, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5938rna5938Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications