EWM24763.1, cds5911 (CDS) Nannochloropsis gaditana

Overview
NameEWM24763.1
Unique Namecds5911
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:111214..111300 -
Alignment locationCM002467.1:110970..111155 -
Alignment locationCM002467.1:110772..110897 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24763.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100612g3.7317.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:111214..111300 -
CM002467.1supercontigCM002467.1:110970..111155 -
CM002467.1supercontigCM002467.1:110772..110897 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24763.1 vs. NCBI_GenBank
Match: gi|585106323|gb|EWM24763.1| (hypothetical protein Naga_100612g3 [Nannochloropsis gaditana])

HSP 1 Score: 277.33 bits (708), Expect = 1.348e-94
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 
Query:    1 MESSWVLYLPPRAFGLWCCSYFARLHATYSLEQALSWCLILKLVREVVNRRDFLPFHLGQPPSSQTSRHDFEKRPGHDNLQDNVPMTLLDVRKRGDKSITMELQRARFFDLKMTANFRRCCLEYPYPIMPLN 132
            MESSWVLYLPPRAFGLWCCSYFARLHATYSLEQALSWCLILKLVREVVNRRDFLPFHLGQPPSSQTSRHDFEKRPGHDNLQDNVPMTLLDVRKRGDKSITMELQRARFFDLKMTANFRRCCLEYPYPIMPLN
Sbjct:    1 MESSWVLYLPPRAFGLWCCSYFARLHATYSLEQALSWCLILKLVREVVNRRDFLPFHLGQPPSSQTSRHDFEKRPGHDNLQDNVPMTLLDVRKRGDKSITMELQRARFFDLKMTANFRRCCLEYPYPIMPLN 132
The following BLAST results are available for this feature:
BLAST of EWM24763.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106323|gb|EWM24763.1|1.348e-94100.00hypothetical protein Naga_100612g3 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5926rna5926Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications