EWM24773.1, cds5905 (CDS) Nannochloropsis gaditana

Overview
NameEWM24773.1
Unique Namecds5905
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:97706..98005 -
Alignment locationCM002467.1:97487..97568 -
Alignment locationCM002467.1:97124..97226 -
Alignment locationCM002467.1:96682..96802 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24773.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100255g7.4992.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:97706..98005 -
CM002467.1supercontigCM002467.1:97487..97568 -
CM002467.1supercontigCM002467.1:97124..97226 -
CM002467.1supercontigCM002467.1:96682..96802 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24773.1 vs. NCBI_GenBank
Match: gi|585106338|gb|EWM24773.1| (hypothetical protein Naga_100255g7 [Nannochloropsis gaditana])

HSP 1 Score: 410.609 bits (1054), Expect = 3.952e-145
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0 
Query:    1 MSSARRNGKITSVIYHDDATIEGKGSYCLEAALAMALEASSPSGGETEEEEKTCIETEKAPAADFDPILEASEKSYLAFSSTAEDGDSRSKPSYFEPVPDDVLCRILTYAGSSRGKCCKRWEKAKTLVLRARHVDALVQKTKLPEPLCRALERELFLATQERIASREYQNMLRKLLFHLKDPGDMRAASSNTRLREELLIG 201
            MSSARRNGKITSVIYHDDATIEGKGSYCLEAALAMALEASSPSGGETEEEEKTCIETEKAPAADFDPILEASEKSYLAFSSTAEDGDSRSKPSYFEPVPDDVLCRILTYAGSSRGKCCKRWEKAKTLVLRARHVDALVQKTKLPEPLCRALERELFLATQERIASREYQNMLRKLLFHLKDPGDMRAASSNTRLREELLIG
Sbjct:    1 MSSARRNGKITSVIYHDDATIEGKGSYCLEAALAMALEASSPSGGETEEEEKTCIETEKAPAADFDPILEASEKSYLAFSSTAEDGDSRSKPSYFEPVPDDVLCRILTYAGSSRGKCCKRWEKAKTLVLRARHVDALVQKTKLPEPLCRALERELFLATQERIASREYQNMLRKLLFHLKDPGDMRAASSNTRLREELLIG 201
The following BLAST results are available for this feature:
BLAST of EWM24773.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106338|gb|EWM24773.1|3.952e-145100.00hypothetical protein Naga_100255g7 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5920rna5920Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications