EWM24786.1, cds5885 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24786.1 vs. NCBI_GenBank
Match: gi|585106372|gb|EWM24786.1| (glycoprotein fp21 [Nannochloropsis gaditana]) HSP 1 Score: 332.413 bits (851), Expect = 3.374e-115 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
Query: 1 MNVRIVLKNGQELDAPVEAALLLPSTLLAGMLEAEEDCGEDERTLELPSVEKTAFEYVMRFLRVHAATPLQDIPKPILENSLGEIVQKEYSEFIESLPYRDLVQVMELAHFLVLDPLLRLSLARVHFILKATPLEEFKRLFLFQNDLTQEEEKVRRETHSILSMGG 166
MNVRIVLKNGQELDAPVEAALLLPSTLLAGMLEAEEDCGEDERTLELPSVEKTAFEYVMRFLRVHAATPLQDIPKPILENSLGEIVQKEYSEFIESLPYRDLVQVMELAHFLVLDPLLRLSLARVHFILKATPLEEFKRLFLFQNDLTQEEEKVRRETHSILSMGG
Sbjct: 1 MNVRIVLKNGQELDAPVEAALLLPSTLLAGMLEAEEDCGEDERTLELPSVEKTAFEYVMRFLRVHAATPLQDIPKPILENSLGEIVQKEYSEFIESLPYRDLVQVMELAHFLVLDPLLRLSLARVHFILKATPLEEFKRLFLFQNDLTQEEEKVRRETHSILSMGG 166
BLAST of EWM24786.1 vs. NCBI_GenBank
Match: gi|401396390|ref|XP_003879810.1| (protein F46A9.4, confirmed by transcript evidence, related [Neospora caninum Liverpool] >gi|325114218|emb|CBZ49775.1| protein F46A9.4, confirmed by transcript evidence, related [Neospora caninum Liverpool] >gi|820688612|tpe|CEL64363.1| TPA: Protein F46A9.4, confirmed by transcript evidence, related [Neospora caninum Liverpool]) HSP 1 Score: 86.2705 bits (212), Expect = 2.837e-18 Identity = 54/158 (34.18%), Postives = 90/158 (56.96%), Query Frame = 0
Query: 3 VRIVLKNGQELDAPVEAALLLPSTLLAGMLEAEEDCGEDERTLELPSVEKTAFEYVMRFLRVHAATPLQDIPKPILENSLGEIVQKEYSEFI-ESLPYRDLVQVMELAHFLVLDPLLRLSLARVHFILKATPLEEFKRLFLFQNDLTQEEEKVRRETH 159
V +V + G E D +E A + S L+ M+E + DC E ++ LP+VE + ++ + H P ++IPKP+ ++L E+V + +FI E+ + L ++ A++L + PLL LS+A+V ++KA EE +R+F ND T EEE RE +
Sbjct: 12 VTLVSQEGDEFDVDIEVASM--SALIKTMVEEDSDCQE---SIPLPNVETCILKKIIEYCEHHYNNPPEEIPKPLKSSNLAEVVSEWDFQFINENSDQKILFALILAANYLNIKPLLDLSVAKVATMIKAKTPEEIRRIFNIVNDFTPEEEAQVREEN 164
BLAST of EWM24786.1 vs. NCBI_GenBank
Match: gi|237840549|ref|XP_002369572.1| (suppressor of kinetochore protein 1, putative [Toxoplasma gondii ME49] >gi|675130068|ref|XP_008886921.1| suppressor of kinetochore protein 1, putative [Hammondia hammondi] >gi|95007279|emb|CAJ20499.1| skp1 family protein, putative [Toxoplasma gondii RH] >gi|523571081|gb|EPR57985.1| putative suppressor of kinetochore protein 1 [Toxoplasma gondii GT1] >gi|527315830|gb|EPT32444.1| suppressor of kinetochore protein 1, putative [Toxoplasma gondii ME49] >gi|557733223|gb|ESS29388.1| putative suppressor of kinetochore protein 1 [Toxoplasma gondii VEG] >gi|661334368|gb|KEP62514.1| suppressor of kinetochore protein 1, putative [Hammondia hammondi] >gi|672254799|gb|KFG30630.1| putative suppressor of kinetochore protein 1 [Toxoplasma gondii p89] >gi|672260561|gb|KFG35139.1| putative suppressor of kinetochore protein 1 [Toxoplasma gondii GAB2-2007-GAL-DOM2] >gi|672278022|gb|KFG49136.1| putative suppressor of kinetochore protein 1 [Toxoplasma gondii FOU] >gi|672296112|gb|KFG60660.1| putative suppressor of kinetochore protein 1 [Toxoplasma gondii RUB] >gi|672565428|gb|KFH05742.1| putative suppressor of kinetochore protein 1 [Toxoplasma gondii VAND] >gi|672577818|gb|KFH15625.1| putative suppressor of kinetochore protein 1 [Toxoplasma gondii MAS] >gi|820695893|tpe|CEL71630.1| TPA: S-phase kinase-associated protein, putative [Toxoplasma gondii VEG] >gi|1005152465|gb|KYF41405.1| putative suppressor of kinetochore protein 1 [Toxoplasma gondii ARI] >gi|1008951229|gb|KYK68439.1| putative suppressor of kinetochore protein 1 [Toxoplasma gondii TgCatPRC2]) HSP 1 Score: 85.8853 bits (211), Expect = 4.690e-18 Identity = 53/158 (33.54%), Postives = 90/158 (56.96%), Query Frame = 0
Query: 3 VRIVLKNGQELDAPVEAALLLPSTLLAGMLEAEEDCGEDERTLELPSVEKTAFEYVMRFLRVHAATPLQDIPKPILENSLGEIVQKEYSEFI-ESLPYRDLVQVMELAHFLVLDPLLRLSLARVHFILKATPLEEFKRLFLFQNDLTQEEEKVRRETH 159
V +V + G E D +E A + S L+ M+E + DC E ++ LP+V+ + ++ + H P ++IPKP+ ++L E+V + +FI E+ + L ++ A++L + PLL LS+A+V ++KA EE +R+F ND T EEE RE +
Sbjct: 12 VTLVSQEGDEFDVDIEVASM--SALIKTMVEEDSDCQE---SIPLPNVDTCILKKIIEYCEHHHNNPPEEIPKPLKSSNLAEVVSEWDYQFINENSDQKILFALILAANYLNIKPLLDLSVAKVATMIKAKTPEEIRRIFNIVNDFTPEEEAQVREEN 164
BLAST of EWM24786.1 vs. NCBI_GenBank
Match: gi|673024782|ref|XP_008866352.1| (hypothetical protein H310_04016 [Aphanomyces invadans] >gi|574477918|gb|ETW04914.1| hypothetical protein H310_04016 [Aphanomyces invadans]) HSP 1 Score: 80.1073 bits (196), Expect = 5.236e-16 Identity = 53/163 (32.52%), Postives = 89/163 (54.60%), Query Frame = 0
Query: 3 VRIVLKNGQELDAPVEAALLLPSTLLAGMLEAEEDCGEDERTLELPSVEKTAFEYVMRFLRVHAATPLQDIPKPILENSLGEIVQKEYSEFIESLPYRDLVQVMELAHFLVLDPLLRLSLARVHFILKATPLEEFKRLFLFQNDLTQEEEKVRRETHSILSMG 165
VR++ G+ + P+E A + S L+ E ED EDE+ LP+V+ + V+ F++ H P++DIPKPI+ S E+V+K EFI PY + +++ A++L + PLL L+ A+V I+ ++ + +F + T EEEK R+ + G
Sbjct: 7 VRLLSSEGESFEVPLEVAKI--SKLIK---EQVEDGVEDEQEFPLPNVKTSVLVKVVEFIKYHHVNPMKDIPKPIV-TSFEEVVEKWDLEFINQ-PYEMIFELILAANYLDIKPLLELACAKVSGIIFGKTPDQIREIFGIEQPFTPEEEKFIRDENKWPESG 162
BLAST of EWM24786.1 vs. NCBI_GenBank
Match: gi|209879962|ref|XP_002141421.1| (suppressor of kinetochore protein 1 [Cryptosporidium muris RN66] >gi|209557027|gb|EEA07072.1| suppressor of kinetochore protein 1, putative [Cryptosporidium muris RN66] >gi|1098427577|gb|OII75634.1| suppressor of kinetochore protein 1 [Cryptosporidium andersoni]) HSP 1 Score: 79.7221 bits (195), Expect = 7.432e-16 Identity = 52/157 (33.12%), Postives = 84/157 (53.50%), Query Frame = 0
Query: 3 VRIVLKNGQELDAPVEAALLLPSTLLAGMLEAEEDCGEDERTLELPSVEKTAFEYVMRFLRVHAATPLQDIPKPILENSLGEIVQKEYSEFIESLPYRDLVQVMELAHFLVLDPLLRLSLARVHFILKATPLEEFKRLFLFQNDLTQEEEKVRRETH 159
V++V G+E + V+ + STL+ M+E D G E + LP+V V+ + + H P ++IPKP+ NSL IV EF+ ++ L ++M A+++ + PLL L A+V ++K EE +++F QND T EEE RE +
Sbjct: 6 VKLVSSEGEEFE--VDICVATASTLIRNMIE---DVG-SEDPIPLPNVRSDVLRKVIEYCKHHVNNPAKEIPKPLRSNSLTHIVSPWDEEFV-NIEQELLFELMLTANYMDIKPLLDLVCAKVATMIKGKKAEEIRQIFNIQNDFTPEEEAAVREEN 155
BLAST of EWM24786.1 vs. NCBI_GenBank
Match: gi|126653263|ref|XP_001388386.1| (Skp1 family protein [Cryptosporidium parvum Iowa II] >gi|126117479|gb|EAZ51579.1| Skp1 family protein, putative [Cryptosporidium parvum Iowa II]) HSP 1 Score: 79.7221 bits (195), Expect = 9.313e-16 Identity = 54/157 (34.39%), Postives = 85/157 (54.14%), Query Frame = 0
Query: 3 VRIVLKNGQELDAPVEAALLLPSTLLAGMLEAEEDCGEDERTLELPSVEKTAFEYVMRFLRVHAATPLQDIPKPILENSLGEIVQKEYSEFIESLPYRDLVQVMELAHFLVLDPLLRLSLARVHFILKATPLEEFKRLFLFQNDLTQEEEKVRRETH 159
VR++ G+E V A STL+ ++EA D G D+ + LP+V V+ + H P ++IPKP+ NSL IV + EF+ ++ L ++M A++L + PLL LS A+V ++K EE +++F +ND T EEE RE +
Sbjct: 6 VRLLSSEGEEFAVDVRVATA--STLVRNIIEA--DVGIDD-PVPLPNVRGDVLRKVLDYCEYHVDNPSKEIPKPLRSNSLSNIVCEWDEEFV-NIQQEFLFELMLAANYLDIKPLLDLSCAKVATMIKGKKAEEIRQIFNIENDFTPEEESAIREEN 156
BLAST of EWM24786.1 vs. NCBI_GenBank
Match: gi|1098426004|gb|OII74124.1| (hypothetical protein cubi_02926 [Cryptosporidium ubiquitum]) HSP 1 Score: 79.337 bits (194), Expect = 1.294e-15 Identity = 53/157 (33.76%), Postives = 86/157 (54.78%), Query Frame = 0
Query: 3 VRIVLKNGQELDAPVEAALLLPSTLLAGMLEAEEDCGEDERTLELPSVEKTAFEYVMRFLRVHAATPLQDIPKPILENSLGEIVQKEYSEFIESLPYRDLVQVMELAHFLVLDPLLRLSLARVHFILKATPLEEFKRLFLFQNDLTQEEEKVRRETH 159
VR+V G+E V+ ++ STL+ ++E D G D+ + LP+V V+ + H P ++IPKP+ NSL IV + EF+ ++ L ++M A++L + PLL LS A+V ++K EE +++F +ND T EEE RE +
Sbjct: 6 VRLVSSEGEEF--AVDVRVVTASTLVRNIIE---DVGIDD-PVPLPNVRGDVLRKVLDYCEYHVDNPSREIPKPLRSNSLSNIVCEWDEEFV-NIQQEFLFELMLAANYLDIKPLLDLSCAKVATMIKGKKAEEIRQIFNIENDFTPEEESAIREEN 155
BLAST of EWM24786.1 vs. NCBI_GenBank
Match: gi|961502951|emb|CUV07236.1| (unnamed protein product [Cryptosporidium hominis] >gi|1129249865|gb|OLQ17922.1| Skp1 family protein [Cryptosporidium hominis]) HSP 1 Score: 77.411 bits (189), Expect = 6.395e-15 Identity = 53/157 (33.76%), Postives = 84/157 (53.50%), Query Frame = 0
Query: 3 VRIVLKNGQELDAPVEAALLLPSTLLAGMLEAEEDCGEDERTLELPSVEKTAFEYVMRFLRVHAATPLQDIPKPILENSLGEIVQKEYSEFIESLPYRDLVQVMELAHFLVLDPLLRLSLARVHFILKATPLEEFKRLFLFQNDLTQEEEKVRRETH 159
VR++ G+E V A STL+ ++E D G D+ + LP+V V+ + H P ++IPKP+ NSL IV + EF+ ++ L ++M A++L + PLL LS A+V ++K EE +++F +ND T EEE RE +
Sbjct: 6 VRLLSSEGEEFAVDVRVATA--STLVRNIIE---DVGIDD-PVPLPNVRGDVLRKVLDYCEYHVDNPSKEIPKPLRSNSLSNIVCEWDEEFV-NIQQEFLFELMLAANYLDIKPLLDLSCAKVATMIKGKKAEEIRQIFNIENDFTPEEESAIREEN 155
BLAST of EWM24786.1 vs. NCBI_GenBank
Match: gi|1210519297|dbj|GAX21881.1| (S-phase kinase-associated protein 1 [Fistulifera solaris] >gi|1210527503|dbj|GAX13788.1| S-phase kinase-associated protein 1 [Fistulifera solaris]) HSP 1 Score: 73.559 bits (179), Expect = 2.226e-13 Identity = 49/160 (30.63%), Postives = 86/160 (53.75%), Query Frame = 0
Query: 3 VRIVLKNGQELDAPVEAALLLPSTLLAGMLEAEEDCGEDERT---LELPSVEKTAFEYVMRFLRVHAATPLQDIPKPILENSLGEIVQKEYSEFIESLPYRDLVQVMELAHFLVLDPLLRLSLARVHFILKATPLEEFKRLFLFQNDLTQEEEKVRRETH 159
V ++ K+G PV + S L+ M++ ED EDE + + LP+V+ + V+ F + H A P+ +I KP+ + ++VQK Y++F+E L L +++ A+++ + PLL L+ A V ++K E+ + F ND + EEE RE +
Sbjct: 8 VNLISKDGDSF--PVSIGVAKMSELVRSMMD--EDENEDENSSMEIPLPNVKSEVLQKVIEFCQHHLAEPMNEIEKPLKSQKMSDVVQKWYADFVE-LEQVLLFELILAANYMDIKPLLDLTCATVASMIKGKSPEDIRATFNITNDFSPEEEAQVREEN 162
BLAST of EWM24786.1 vs. NCBI_GenBank
Match: gi|219109658|ref|XP_002176583.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411118|gb|EEC51046.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 73.1738 bits (178), Expect = 2.899e-13 Identity = 48/162 (29.63%), Postives = 86/162 (53.09%), Query Frame = 0
Query: 3 VRIVLKNGQELDAPVEAALLLPSTLLAGMLEAEEDCGEDERTLELPSVEKTAFEYVMRFLRVHAATPLQDIPKPILENSLGEIVQKEYSEFIESLPYRDLVQVM--EL---AHFLVLDPLLRLSLARVHFILKATPLEEFKRLFLFQNDLTQEEEKVRRETH 159
V ++ K+G P+ A + S L+ GM++ + + D+ + LP+V+ V+ F H P+ +I KP+ + ++VQK Y++F+ D+ QV+ EL A+++ + PLL L+ A V ++K E+ ++ F QND + EEE RE +
Sbjct: 10 VNLISKDGDSFSVPLAVAKM--SELVKGMIDEDAEDEGDKIEIPLPNVKSQVLNKVIEFCEHHLQEPMTEIEKPLKSQVMADVVQKWYADFV------DVEQVLLFELILAANYMDIKPLLDLTCATVAGMIKGKTPEDIRQTFGIQNDFSPEEEAQVREEN 163 The following BLAST results are available for this feature:
BLAST of EWM24786.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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