EWM24792.1, cds5881 (CDS) Nannochloropsis gaditana

Overview
NameEWM24792.1
Unique Namecds5881
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:19585..19774 +
Alignment locationCM002467.1:20096..20269 +
Alignment locationCM002467.1:20440..20525 +
Alignment locationCM002467.1:20683..20736 +
Alignment locationCM002467.1:20944..21192 +

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Properties
Property NameValue
Protein idEWM24792.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100648g1.6431.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:19585..19774 +
CM002467.1supercontigCM002467.1:20096..20269 +
CM002467.1supercontigCM002467.1:20440..20525 +
CM002467.1supercontigCM002467.1:20683..20736 +
CM002467.1supercontigCM002467.1:20944..21192 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24792.1 vs. NCBI_GenBank
Match: gi|585106381|gb|EWM24792.1| (hypothetical protein Naga_100648g1 [Nannochloropsis gaditana])

HSP 1 Score: 516.924 bits (1330), Expect = 0.000e+0
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0 
Query:    1 MAVSRTATPLFLIFLVVVFSCSYCIHAFHLPLRHNYPNIGHEKRKAWFSSVDFQKIGEQDRWRATRTSSASSSQEQEEGKKAMAPDEEIMEALIATEWADLEAFSNQHYKYLIHPQFYMKLADRIYELPTQEEQDEAAAKATKIWNRLLKILESAETMRTTTAEKLEKMVAQAAEDDGAFLFPLAPDRVEVKPPFRPPSLPPSLPPFLAPIQFPSLLYFVPLSPLCHAFFFDARSILSNVRRHVSPGVRC 250
            MAVSRTATPLFLIFLVVVFSCSYCIHAFHLPLRHNYPNIGHEKRKAWFSSVDFQKIGEQDRWRATRTSSASSSQEQEEGKKAMAPDEEIMEALIATEWADLEAFSNQHYKYLIHPQFYMKLADRIYELPTQEEQDEAAAKATKIWNRLLKILESAETMRTTTAEKLEKMVAQAAEDDGAFLFPLAPDRVEVKPPFRPPSLPPSLPPFLAPIQFPSLLYFVPLSPLCHAFFFDARSILSNVRRHVSPGVRC
Sbjct:    1 MAVSRTATPLFLIFLVVVFSCSYCIHAFHLPLRHNYPNIGHEKRKAWFSSVDFQKIGEQDRWRATRTSSASSSQEQEEGKKAMAPDEEIMEALIATEWADLEAFSNQHYKYLIHPQFYMKLADRIYELPTQEEQDEAAAKATKIWNRLLKILESAETMRTTTAEKLEKMVAQAAEDDGAFLFPLAPDRVEVKPPFRPPSLPPSLPPFLAPIQFPSLLYFVPLSPLCHAFFFDARSILSNVRRHVSPGVRC 250
The following BLAST results are available for this feature:
BLAST of EWM24792.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106381|gb|EWM24792.1|0.000e+0100.00hypothetical protein Naga_100648g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5896rna5896Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications