EWM24793.1, cds5880 (CDS) Nannochloropsis gaditana

Overview
NameEWM24793.1
Unique Namecds5880
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:17804..17913 -
Alignment locationCM002467.1:17477..17586 -
Alignment locationCM002467.1:16377..16399 -

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Properties
Property NameValue
Protein idEWM24793.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100648g2.6432.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:17804..17913 -
CM002467.1supercontigCM002467.1:17477..17586 -
CM002467.1supercontigCM002467.1:16377..16399 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24793.1 vs. NCBI_GenBank
Match: gi|585106382|gb|EWM24793.1| (hypothetical protein Naga_100648g2 [Nannochloropsis gaditana])

HSP 1 Score: 165.622 bits (418), Expect = 6.438e-52
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 
Query:    1 MGLLQNWSVLSAHLVEAEGGTEDWGLPGVLASRISSGYFARYRQSTDAFLSLVSPTSSTQLQHPPDAPCPAGNDACAGPE 80
            MGLLQNWSVLSAHLVEAEGGTEDWGLPGVLASRISSGYFARYRQSTDAFLSLVSPTSSTQLQHPPDAPCPAGNDACAGPE
Sbjct:    1 MGLLQNWSVLSAHLVEAEGGTEDWGLPGVLASRISSGYFARYRQSTDAFLSLVSPTSSTQLQHPPDAPCPAGNDACAGPE 80
The following BLAST results are available for this feature:
BLAST of EWM24793.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106382|gb|EWM24793.1|6.438e-52100.00hypothetical protein Naga_100648g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5895rna5895Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications