EWM30089.1, cds585 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30089.1 vs. NCBI_GenBank
Match: gi|585112729|gb|EWM30089.1| (Pyridoxal phosphate-dependent transferase, major domain protein [Nannochloropsis gaditana]) HSP 1 Score: 352.829 bits (904), Expect = 3.033e-123 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
Query: 1 MPTLDERLAAMDMDKSADDGPHLMSRQSTIAHPLEATYGYSFGYAYCARTMRKSVPKYRMPDAPLPANVVKTLIDDEMVLDGTPRMNLATFVTTYMEKECEDLMMEAARKNYIDIDEYPQTYEIQKRCVNILSHLWNAPLGAEEEGTGTSTVGSSEAIMGNRMTSRIW 168
MPTLDERLAAMDMDKSADDGPHLMSRQSTIAHPLEATYGYSFGYAYCARTMRKSVPKYRMPDAPLPANVVKTLIDDEMVLDGTPRMNLATFVTTYMEKECEDLMMEAARKNYIDIDEYPQTYEIQKRCVNILSHLWNAPLGAEEEGTGTSTVGSSEAIMGNRMTSRIW
Sbjct: 1 MPTLDERLAAMDMDKSADDGPHLMSRQSTIAHPLEATYGYSFGYAYCARTMRKSVPKYRMPDAPLPANVVKTLIDDEMVLDGTPRMNLATFVTTYMEKECEDLMMEAARKNYIDIDEYPQTYEIQKRCVNILSHLWNAPLGAEEEGTGTSTVGSSEAIMGNRMTSRIW 168
BLAST of EWM30089.1 vs. NCBI_GenBank
Match: gi|553185252|ref|XP_005854222.1| (glutamate decarboxylase, partial [Nannochloropsis gaditana CCMP526] >gi|422294836|gb|EKU22136.1| glutamate decarboxylase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 228.024 bits (580), Expect = 1.925e-73 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
Query: 51 MRKSVPKYRMPDAPLPANVVKTLIDDEMVLDGTPRMNLATFVTTYMEKECEDLMMEAARKNYIDIDEYPQTYEIQKRCVNILSHLWNAPLGAEEEGTGTSTVGSSEAIM 159
MRKSVPKYRMPDAPLPANVVKTLIDDEMVLDGTPRMNLATFVTTYMEKECEDLMMEAARKNYIDIDEYPQTYEIQKRCVNILSHLWNAPLGAEEEGTGTSTVGSSEAIM
Sbjct: 1 MRKSVPKYRMPDAPLPANVVKTLIDDEMVLDGTPRMNLATFVTTYMEKECEDLMMEAARKNYIDIDEYPQTYEIQKRCVNILSHLWNAPLGAEEEGTGTSTVGSSEAIM 109
BLAST of EWM30089.1 vs. NCBI_GenBank
Match: gi|922353928|ref|XP_013452780.1| (glutamate decarboxylase [Medicago truncatula] >gi|657383014|gb|KEH26808.1| glutamate decarboxylase [Medicago truncatula]) HSP 1 Score: 157.147 bits (396), Expect = 1.509e-42 Identity = 70/136 (51.47%), Postives = 100/136 (73.53%), Query Frame = 0
Query: 24 MSRQSTIAHPLEATYGYSFGYAYCARTMRKSVPKYRMPDAPLPANVVKTLIDDEMVLDGTPRMNLATFVTTYMEKECEDLMMEAARKNYIDIDEYPQTYEIQKRCVNILSHLWNAPLGAEEEGTGTSTVGSSEAIM 159
M ST++HP E S + +R +R+ VPK++MP+ +P + +I+DE++LDG PR+NLA+FVTT+ME EC+ L+M++ KNY+D+DEYP T E+Q RCVNI++HL+NAP+G+EE G TVGSSEAIM
Sbjct: 1 MVISSTVSHPDEQNE--SIACTFASRYVREQVPKFKMPENSIPKDAAYQIINDELMLDGKPRLNLASFVTTWMEPECDKLIMDSLNKNYVDMDEYPVTTELQNRCVNIIAHLFNAPIGSEETAVGVGTVGSSEAIM 134
BLAST of EWM30089.1 vs. NCBI_GenBank
Match: gi|1142968971|gb|AQM32552.1| (glutamate decarboxylase 2 [Caragana korshinskii]) HSP 1 Score: 157.147 bits (396), Expect = 1.641e-42 Identity = 71/136 (52.21%), Postives = 99/136 (72.79%), Query Frame = 0
Query: 24 MSRQSTIAHPLEATYGYSFGYAYCARTMRKSVPKYRMPDAPLPANVVKTLIDDEMVLDGTPRMNLATFVTTYMEKECEDLMMEAARKNYIDIDEYPQTYEIQKRCVNILSHLWNAPLGAEEEGTGTSTVGSSEAIM 159
M ST+ HP E +G S + +R MR+SVPK++MP+ +P + +I+DE++LDG PR+NLA+FVTT+ME EC+ L+M + KNY+D+DEYP T E+Q RCVNI++HL++AP+G E G TVGSSEAIM
Sbjct: 1 MVITSTVTHPDE--HGQSLDCTFASRYMRESVPKFKMPEGSIPKDAAYQIINDELMLDGKPRLNLASFVTTWMEPECDKLIMASLNKNYVDMDEYPVTTELQNRCVNIIAHLFHAPIGESEVAVGVGTVGSSEAIM 134
BLAST of EWM30089.1 vs. NCBI_GenBank
Match: gi|388492338|gb|AFK34235.1| (unknown [Medicago truncatula]) HSP 1 Score: 156.762 bits (395), Expect = 2.131e-42 Identity = 70/136 (51.47%), Postives = 100/136 (73.53%), Query Frame = 0
Query: 24 MSRQSTIAHPLEATYGYSFGYAYCARTMRKSVPKYRMPDAPLPANVVKTLIDDEMVLDGTPRMNLATFVTTYMEKECEDLMMEAARKNYIDIDEYPQTYEIQKRCVNILSHLWNAPLGAEEEGTGTSTVGSSEAIM 159
M ST++HP E S + +R +R+ VPK++MP+ +P + +I+DE++LDG PR+NLA+FVTT+ME EC+ L+M++ KNY+D+DEYP T E+Q RCVNI++HL+NAP+G+EE G TVGSSEAIM
Sbjct: 1 MVISSTVSHPDEQNE--SIACTFASRYVREQVPKFKMPENSIPKDAAYRIINDELMLDGKPRLNLASFVTTWMEPECDKLIMDSLNKNYVDMDEYPVTTELQNRCVNIIAHLFNAPIGSEETAVGVGTVGSSEAIM 134
BLAST of EWM30089.1 vs. NCBI_GenBank
Match: gi|703116132|ref|XP_010101062.1| (Glutamate decarboxylase 1 [Morus notabilis] >gi|587898330|gb|EXB86772.1| Glutamate decarboxylase 1 [Morus notabilis]) HSP 1 Score: 147.517 bits (371), Expect = 4.111e-42 Identity = 62/114 (54.39%), Postives = 87/114 (76.32%), Query Frame = 0
Query: 46 YCARTMRKSVPKYRMPDAPLPANVVKTLIDDEMVLDGTPRMNLATFVTTYMEKECEDLMMEAARKNYIDIDEYPQTYEIQKRCVNILSHLWNAPLGAEEEGTGTSTVGSSEAIM 159
+ +R +R S+P+++MP+ +P +I+DE++LDG PR+NLA+FVTT+ME EC+ L+M + KNY+D+DEYP T E+Q RCVNI++HL+NAPLG E G TVGSSEAIM
Sbjct: 18 FASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNIIAHLFNAPLGESEAAVGVGTVGSSEAIM 131
BLAST of EWM30089.1 vs. NCBI_GenBank
Match: gi|1173122927|ref|XP_020526109.1| (glutamate decarboxylase 1-like [Amborella trichopoda]) HSP 1 Score: 147.132 bits (370), Expect = 5.701e-42 Identity = 63/114 (55.26%), Postives = 87/114 (76.32%), Query Frame = 0
Query: 46 YCARTMRKSVPKYRMPDAPLPANVVKTLIDDEMVLDGTPRMNLATFVTTYMEKECEDLMMEAARKNYIDIDEYPQTYEIQKRCVNILSHLWNAPLGAEEEGTGTSTVGSSEAIM 159
+ +R +R S+P++RM + +P +I+DE++LDG PR+NLA+FVTT+ME EC+ L+M A KNY+D+DEYP T E+Q RCVN+++HL+NAPLG EE G TVGSSEAIM
Sbjct: 18 FASRYVRASLPRFRMAENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGEEETAVGVGTVGSSEAIM 131
BLAST of EWM30089.1 vs. NCBI_GenBank
Match: gi|502173062|ref|XP_004515245.1| (PREDICTED: glutamate decarboxylase-like [Cicer arietinum]) HSP 1 Score: 155.606 bits (392), Expect = 5.999e-42 Identity = 70/136 (51.47%), Postives = 100/136 (73.53%), Query Frame = 0
Query: 24 MSRQSTIAHPLEATYGYSFGYAYCARTMRKSVPKYRMPDAPLPANVVKTLIDDEMVLDGTPRMNLATFVTTYMEKECEDLMMEAARKNYIDIDEYPQTYEIQKRCVNILSHLWNAPLGAEEEGTGTSTVGSSEAIM 159
M ST+ HP E + + + +R +R+ VPK++MP++ +P + +I+DE++LDG PR+NLA+FVTT+ME EC+ L+M + KNY+D+DEYP T E+Q RCVNI++HL+NAP+GAEE G TVGSSEAIM
Sbjct: 1 MVITSTVTHPDE--HRQNIDCTFASRYVREPVPKFKMPESSIPKDAAYQIINDELMLDGKPRLNLASFVTTWMEPECDKLIMASLNKNYVDMDEYPVTTELQNRCVNIIAHLFNAPIGAEETAVGVGTVGSSEAIM 134
BLAST of EWM30089.1 vs. NCBI_GenBank
Match: gi|218194936|gb|EEC77363.1| (hypothetical protein OsI_16068 [Oryza sativa Indica Group]) HSP 1 Score: 148.288 bits (373), Expect = 1.417e-41 Identity = 62/114 (54.39%), Postives = 89/114 (78.07%), Query Frame = 0
Query: 46 YCARTMRKSVPKYRMPDAPLPANVVKTLIDDEMVLDGTPRMNLATFVTTYMEKECEDLMMEAARKNYIDIDEYPQTYEIQKRCVNILSHLWNAPLGAEEEGTGTSTVGSSEAIM 159
+ +R +R ++P++RMP+ +P + +I+DE++LDG PR+NLA+FVTT+ME EC+ LMM A KNY+D+DEYP T E+Q RCVN+++HL+NAP+G +E G TVGSSEAIM
Sbjct: 17 FASRYVRTALPRFRMPEKSIPKDAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPIGDDETAVGVGTVGSSEAIM 130
BLAST of EWM30089.1 vs. NCBI_GenBank
Match: gi|1191646251|gb|OTF98224.1| (putative pyridoxal phosphate-dependent decarboxylase, Pyridoxal phosphate-dependent transferase [Helianthus annuus]) HSP 1 Score: 149.058 bits (375), Expect = 2.267e-41 Identity = 65/119 (54.62%), Postives = 89/119 (74.79%), Query Frame = 0
Query: 41 SFGYAYCARTMRKSVPKYRMPDAPLPANVVKTLIDDEMVLDGTPRMNLATFVTTYMEKECEDLMMEAARKNYIDIDEYPQTYEIQKRCVNILSHLWNAPLGAEEEGTGTSTVGSSEAIM 159
S + +R +R S+P+++MP+ +P +I+DE++LDG PR+NLA+FVTT+ME EC+ LMM A KNY+D+DEYP T E+Q RCVN+++HL+NAPLG EE G TVGSSEAIM
Sbjct: 14 SLHSTFASRYVRTSLPRFKMPEESIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGDEETAVGVGTVGSSEAIM 132 The following BLAST results are available for this feature:
BLAST of EWM30089.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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