EWM24834.1, cds5842 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24834.1 vs. NCBI_GenBank
Match: gi|585106430|gb|EWM24834.1| (adp-ribosylation factor 1 [Nannochloropsis gaditana]) HSP 1 Score: 394.815 bits (1013), Expect = 3.828e-139 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0
Query: 1 MGGLLSRVLDTLSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVNYKNICFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFDEAKTELLSLLSEHQLSHSTILVFANKADLPTAIPVVEIAQLLQLDRAAKGRHWYIQPSCATTGDGLVEGLDWLSCKLKEAGPRPPSSA 192
MGGLLSRVLDTLSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVNYKNICFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFDEAKTELLSLLSEHQLSHSTILVFANKADLPTAIPVVEIAQLLQLDRAAKGRHWYIQPSCATTGDGLVEGLDWLSCKLKEAGPRPPSSA
Sbjct: 1 MGGLLSRVLDTLSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVNYKNICFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFDEAKTELLSLLSEHQLSHSTILVFANKADLPTAIPVVEIAQLLQLDRAAKGRHWYIQPSCATTGDGLVEGLDWLSCKLKEAGPRPPSSA 192
BLAST of EWM24834.1 vs. NCBI_GenBank
Match: gi|585106427|gb|EWM24831.1| (adp-ribosylation factor [Nannochloropsis gaditana]) HSP 1 Score: 288.886 bits (738), Expect = 6.865e-97 Identity = 145/185 (78.38%), Postives = 158/185 (85.41%), Query Frame = 0
Query: 1 MGGLLSRVLDTLSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVNYKNICFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFDEAKTELLSLLSEHQLSHSTILVFANKADLPTAIPVVEIAQLLQLDRAAKGRHWYIQPSCATTGDGLVEGLDWLSCKLKEAG 185
MG L++RVLD L GK+++R+LMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVE V Y+NI FTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADR R EA++EL LLSE QL S +LV+ANKADLP AI V E+A+LLQLD AKGR WYIQPSCA TGDGLVEGLDWLS KLKE G
Sbjct: 1 MGQLMTRVLDVLW---GKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLKEVG 182
BLAST of EWM24834.1 vs. NCBI_GenBank
Match: gi|157093559|gb|ABV22434.1| (ADP-ribosylation factor 1 [Oxyrrhis marina]) HSP 1 Score: 232.646 bits (592), Expect = 3.232e-75 Identity = 112/181 (61.88%), Postives = 137/181 (75.69%), Query Frame = 0
Query: 1 MGGLLSRVLDTLSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVNYKNICFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFDEAKTELLSLLSEHQLSHSTILVFANKADLPTAIPVVEIAQLLQLDRAAKGRHWYIQPSCATTGDGLVEGLDWLSCKL 181
MG SR+ S L KQE RILM+GLDAAGKTTILY+L+LGE V +IPTIGFNVETV YKNI FT+WDVGGQD++R LWRHYY++ LIFV+DS DR+R D+A+ EL +LSE ++ + +LVFANK DLP A+P E+ + L+L + R WYIQ +CATTGDGL EGLDWLS L
Sbjct: 1 MGLAFSRLF---SRLFSKQEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRALWRHYYQNTQGLIFVVDSNDRERVDDAREELHKILSEDEMKDAVLLVFANKQDLPQAMPAAEVTEKLKLT-SMSNRQWYIQSTCATTGDGLYEGLDWLSRTL 177
BLAST of EWM24834.1 vs. NCBI_GenBank
Match: gi|1168929878|ref|XP_020508130.1| (ADP-ribosylation factor 1-like [Labrus bergylta]) HSP 1 Score: 232.261 bits (591), Expect = 5.904e-75 Identity = 110/174 (63.22%), Postives = 137/174 (78.74%), Query Frame = 0
Query: 11 TLSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVNYKNICFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFDEAKTELLSLLSEHQLSHSTILVFANKADLPTAIPVVEIAQLLQLDRAAKGRHWYIQPSCATTGDGLVEGLDWLSCKLKEA 184
LS L GK+E RILM+GLDAAGKTTILY+L+LGE V +IPTIGFNVETV+YKNI FT+WDVGGQD++R LWRHY+++ LIFV+DS DR+R EAK EL+ +L+E +L +LVFANK DLP A+ EI LQL ++ +GR WYIQ +CAT+GDGL EGL+WLS +LK
Sbjct: 8 VLSRLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAKDELMRMLAEDELRDCVVLVFANKQDLPNAMNAAEITDKLQL-QSLRGRSWYIQATCATSGDGLYEGLEWLSNELKNV 180
BLAST of EWM24834.1 vs. NCBI_GenBank
Match: gi|209882857|ref|XP_002142864.1| (ADP ribosylation factor [Cryptosporidium muris RN66] >gi|209558470|gb|EEA08515.1| ADP ribosylation factor, putative [Cryptosporidium muris RN66] >gi|1098425341|gb|OII73476.1| ADP ribosylation factor [Cryptosporidium andersoni]) HSP 1 Score: 230.72 bits (587), Expect = 1.947e-74 Identity = 111/183 (60.66%), Postives = 143/183 (78.14%), Query Frame = 0
Query: 1 MGGLLSRVLDTLSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVNYKNICFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFDEAKTELLSLLSEHQLSHSTILVFANKADLPTAIPVVEIAQLLQLDRAAKGRHWYIQPSCATTGDGLVEGLDWLSCKLKE 183
MG LSR+ + L GK+E RILM+GLDAAGKTTILY+L+LGE V +IPTIGFNVETV YKNI FT+WDVGGQD++R LWRHYY + D LIFV+DS DRDR ++++ EL+ +LSE +L + ++V ANK DLP A+ V E+ + LQL + + R+WYIQ +CATTGDGL EGLDWL+ L++
Sbjct: 1 MGLALSRIWNRLF---GKREMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYTNTDGLIFVVDSNDRDRINDSRDELMRMLSEDELRDACLVVLANKQDLPNAMSVTEVTEKLQLS-SIRHRNWYIQSTCATTGDGLYEGLDWLARNLEK 179
BLAST of EWM24834.1 vs. NCBI_GenBank
Match: gi|443710208|gb|ELU04506.1| (hypothetical protein CAPTEDRAFT_151740 [Capitella teleta]) HSP 1 Score: 230.72 bits (587), Expect = 2.011e-74 Identity = 110/182 (60.44%), Postives = 138/182 (75.82%), Query Frame = 0
Query: 1 MGGLLSRVLDTLSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVNYKNICFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFDEAKTELLSLLSEHQLSHSTILVFANKADLPTAIPVVEIAQLLQLDRAAKGRHWYIQPSCATTGDGLVEGLDWLSCKLK 182
MG + R+ L GK+E RILM+GLDAAGKTTILY+L+LGE V +IPTIGFNVETV YKNI FT+WDVGGQD++R LWRHY+++ LIFV+DS DR+R EA+ EL+ +L+E +L + +LVFANK DLP A+ EI L L + + RHWYIQ +CAT+GDGL EGLDWLS +LK
Sbjct: 1 MGNMFERIF---KGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIAEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL-HSLRHRHWYIQATCATSGDGLYEGLDWLSNQLK 178
BLAST of EWM24834.1 vs. NCBI_GenBank
Match: gi|498929250|ref|XP_004518598.1| (ADP-ribosylation factor 2 [Ceratitis capitata] >gi|751437250|ref|XP_011184949.1| PREDICTED: ADP-ribosylation factor 2 [Zeugodacus cucurbitae] >gi|751437252|ref|XP_011185750.1| PREDICTED: ADP-ribosylation factor 2 [Zeugodacus cucurbitae] >gi|751790982|ref|XP_011205067.1| PREDICTED: ADP-ribosylation factor 2 [Bactrocera dorsalis] >gi|929367270|ref|XP_014093371.1| PREDICTED: ADP-ribosylation factor 2 [Bactrocera oleae] >gi|1048035448|ref|XP_017491838.1| PREDICTED: ADP-ribosylation factor 2 [Rhagoletis zephyria] >gi|1098678073|ref|XP_018798872.1| PREDICTED: ADP-ribosylation factor 2 [Bactrocera latifrons] >gi|1184336024|ref|XP_020716326.1| ADP-ribosylation factor 2 [Ceratitis capitata]) HSP 1 Score: 230.72 bits (587), Expect = 2.395e-74 Identity = 106/170 (62.35%), Postives = 136/170 (80.00%), Query Frame = 0
Query: 12 LSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVNYKNICFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFDEAKTELLSLLSEHQLSHSTILVFANKADLPTAIPVVEIAQLLQLDRAAKGRHWYIQPSCATTGDGLVEGLDWLSCKL 181
L+ L GK++ RILM+GLDAAGKTTILY+L+LGE V +IPTIGFNVETV YKNICFT+WDVGGQD++R LWRHY+++ LIFV+DS DRDR +EA+ EL ++L E +L + +LVFANK DLP A+ E+ L+L++ + RHWYIQ +CAT G+GL EGLDWLS +L
Sbjct: 9 LTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRINEAEKELQNMLQEDELRDAVLLVFANKQDLPNAMSAAELTDKLRLNQ-LRNRHWYIQAACATQGNGLYEGLDWLSAEL 177
BLAST of EWM24834.1 vs. NCBI_GenBank
Match: gi|1209684977|gb|OWR41595.1| (ADP-ribosylation factor [Danaus plexippus plexippus]) HSP 1 Score: 230.335 bits (586), Expect = 2.794e-74 Identity = 109/184 (59.24%), Postives = 139/184 (75.54%), Query Frame = 0
Query: 1 MGGLLSRVLDTLSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVNYKNICFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFDEAKTELLSLLSEHQLSHSTILVFANKADLPTAIPVVEIAQLLQLDRAAKGRHWYIQPSCATTGDGLVEGLDWLSCKLKEA 184
MG + + + L GK+E RILM+GLDAAGKTTILY+L+LGE V +IPTIGFNVETV YKNI FT+WDVGGQD++R LWRHY+++ LIFV+DS DR+R EA+ EL+ +LSE +L + +L+FANK DLP A+ EI L L + + R+WYIQ +CAT+GDGL EGLDWLS +LK A
Sbjct: 1 MGNMFANLF---KGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAAEITDKLSL-HSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKNA 180
BLAST of EWM24834.1 vs. NCBI_GenBank
Match: gi|1132468020|gb|OLY83737.1| (ADP-ribosylation factor [Smittium mucronatum]) HSP 1 Score: 230.335 bits (586), Expect = 2.823e-74 Identity = 111/171 (64.91%), Postives = 134/171 (78.36%), Query Frame = 0
Query: 12 LSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVNYKNICFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFDEAKTELLSLLSEHQLSHSTILVFANKADLPTAIPVVEIAQLLQLDRAAKGRHWYIQPSCATTGDGLVEGLDWLSCKLK 182
LS L GK+E RILM+GLDAAGKTTILY+L+LGE V +IPTIGFNVETV YKNI FT+WDVGGQD++R LWRHYY++ +IFV+DS DR+R +EA+ EL LL+E +L S +LVFANK DLP A+ EI L L R+ + R WYIQ +CAT+GDGL EGLDWLS LK
Sbjct: 9 LSGLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNINFTVWDVGGQDKIRPLWRHYYQNTQGVIFVVDSNDRERVNEARDELTRLLNEDELRDSILLVFANKQDLPNAMDSAEITDKLGL-RSMRNRIWYIQSACATSGDGLYEGLDWLSTNLK 178
BLAST of EWM24834.1 vs. NCBI_GenBank
Match: gi|156387456|ref|XP_001634219.1| (predicted protein [Nematostella vectensis] >gi|156221300|gb|EDO42156.1| predicted protein [Nematostella vectensis]) HSP 1 Score: 230.335 bits (586), Expect = 2.982e-74 Identity = 110/184 (59.78%), Postives = 140/184 (76.09%), Query Frame = 0
Query: 1 MGGLLSRVLDTLSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVNYKNICFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFDEAKTELLSLLSEHQLSHSTILVFANKADLPTAIPVVEIAQLLQLDRAAKGRHWYIQPSCATTGDGLVEGLDWLSCKLKEA 184
MGG+ +++ + L GK+E RILM+GLDAAGKTTILY+L+LGE V +IPTIGFNVETV YKNI FT+WDVGGQD++R LWRHY+++ LIFV+DS DR+R EA+ EL +L+E +L + +LVFANK DLP A+ EI L L + + R WYIQ +CAT+GDGL EGLDWLS +LK A
Sbjct: 1 MGGMFAKLF---AGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELNRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL-HSLRNRQWYIQATCATSGDGLYEGLDWLSSQLKNA 180 The following BLAST results are available for this feature:
BLAST of EWM24834.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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