EWM24832.1, cds5841 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24832.1 vs. NCBI_GenBank
Match: gi|585106428|gb|EWM24832.1| (adp-ribosylation factor [Nannochloropsis gaditana]) HSP 1 Score: 393.275 bits (1009), Expect = 1.778e-138 Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0
Query: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVGALLEGGREEGKGYRDVDRDADHYLREDEGSLVMLCRPLDELTLCIV 195
MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVGALLEGGREEGKGYRDVDRDADHYLREDEGSLVMLCRPLDELTLCIV
Sbjct: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVGALLEGGREEGKGYRDVDRDADHYLREDEGSLVMLCRPLDELTLCIV 195
BLAST of EWM24832.1 vs. NCBI_GenBank
Match: gi|585106427|gb|EWM24831.1| (adp-ribosylation factor [Nannochloropsis gaditana]) HSP 1 Score: 298.901 bits (764), Expect = 8.333e-101 Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0
Query: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVG 149
MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNV
Sbjct: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVA 149
BLAST of EWM24832.1 vs. NCBI_GenBank
Match: gi|585106430|gb|EWM24834.1| (adp-ribosylation factor 1 [Nannochloropsis gaditana]) HSP 1 Score: 227.254 bits (578), Expect = 8.180e-73 Identity = 115/149 (77.18%), Postives = 128/149 (85.91%), Query Frame = 0
Query: 1 MGQLMTRVLDVL---WGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLD 146
MG L++RVLD L GK+++R+LMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVE V Y+NI FTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADR R EA++EL LLSE QL S +LV+ANKADLP AI V E+A+LLQLD
Sbjct: 1 MGGLLSRVLDTLSALGGKQEKRILMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVETVNYKNICFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRDRFDEAKTELLSLLSEHQLSHSTILVFANKADLPTAIPVVEIAQLLQLD 149
BLAST of EWM24832.1 vs. NCBI_GenBank
Match: gi|576696292|gb|EUB59848.1| (ADP-ribosylation factor [Echinococcus granulosus] >gi|674266172|emb|CDI98679.1| ADP-ribosylation factor family [Echinococcus multilocularis]) HSP 1 Score: 199.519 bits (506), Expect = 5.567e-62 Identity = 91/148 (61.49%), Postives = 121/148 (81.76%), Query Frame = 0
Query: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNV 148
MG L TR+ D L+GK++ R+LM+GLDAAGKTTILY+L+LGE V +IPTIGFNVE VEY+N++FT+WDVGGQD++R LWRHY+++ LIFV+DS DR RL EAR+EL+ +LSE +L D++LLV+ANK DLP A EM + L L+++
Sbjct: 1 MGALFTRLFDRLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNVNFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERLVEARNELNRMLSEDELRDAVLLVFANKQDLPNACPASEMTQKLGLNSL 148
BLAST of EWM24832.1 vs. NCBI_GenBank
Match: gi|209876175|ref|XP_002139530.1| (ADP-ribosylation factor 1 [Cryptosporidium muris RN66] >gi|209555136|gb|EEA05181.1| ADP-ribosylation factor 1, putative [Cryptosporidium muris RN66] >gi|1098430061|gb|OII77910.1| ADP-ribosylation factor 1 [Cryptosporidium andersoni]) HSP 1 Score: 198.364 bits (503), Expect = 1.304e-61 Identity = 92/148 (62.16%), Postives = 119/148 (80.41%), Query Frame = 0
Query: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNV 148
MG +T++ L+GK+D R+LM+GLDAAGKTTILY+L+LGE V +IPTIGFNVE VEY+NISFT+WDVGGQD++R LWRHYY + D LIFV+DS DR R+++AR EL +LSE +L D+ LLV+ANK DLP A+S ++ LQL N+
Sbjct: 1 MGLALTKIWRNLFGKKDMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERINDARDELARMLSEDELRDAALLVFANKQDLPNAMSATDVTEKLQLSNI 148
BLAST of EWM24832.1 vs. NCBI_GenBank
Match: gi|1102622923|emb|CRG99070.1| (ADP-ribosylation factor, putative [Plasmodium relictum]) HSP 1 Score: 196.823 bits (499), Expect = 6.225e-61 Identity = 89/148 (60.14%), Postives = 120/148 (81.08%), Query Frame = 0
Query: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNV 148
MG ++R+ + L+ K+D R+LM+GLDAAGKTTILY+++LGE V +IPTIGFNVE VE+RNISFT+WDVGGQD++R LWRHYY + D LIFV+DS DR R+ +AR ELH +++E +L D+I+LV+ANK DLP A+S E+ LQL+ +
Sbjct: 1 MGLYVSRLFNRLFQKKDVRILMVGLDAAGKTTILYKVKLGEVVTTIPTIGFNVETVEFRNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANKQDLPNAMSAAEVTEKLQLNTI 148
BLAST of EWM24832.1 vs. NCBI_GenBank
Match: gi|1098422398|gb|OII70755.1| (ARF1 2 like small GTPase [Cryptosporidium ubiquitum]) HSP 1 Score: 196.823 bits (499), Expect = 7.166e-61 Identity = 91/148 (61.49%), Postives = 118/148 (79.73%), Query Frame = 0
Query: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNV 148
MG +T++ L+GK+D R+LM+GLDAAGKTTILY+L+LGE V +IPTIGFNVE VEY+NISFT+WDVGGQD++R LWRHYY + D LIFVIDS DR R+++AR EL +L E +L D++LLV+ANK DLP A+S ++ LQL +
Sbjct: 1 MGLALTKIWRNLFGKKDMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVIDSNDRERINDARDELARMLGEDELRDAVLLVFANKQDLPNAMSATDITEKLQLSGI 148
BLAST of EWM24832.1 vs. NCBI_GenBank
Match: gi|1194444258|dbj|GAW79911.1| (ADP-ribosylation factor [Plasmodium gonderi]) HSP 1 Score: 196.438 bits (498), Expect = 8.003e-61 Identity = 89/148 (60.14%), Postives = 120/148 (81.08%), Query Frame = 0
Query: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNV 148
MG L++R+ + L+ K+D R+LM+GLDAAGKTTILY+++LGE V +IPTIGFNVE VE+RNISFT+WDVGGQD++R LWRHYY + D LIFV+DS DR R+ +AR ELH +++E +L D+I+LV+ANK DLP A+S E+ L L+ +
Sbjct: 1 MGLLISRLFNRLFQKKDVRILMVGLDAAGKTTILYKVKLGEVVTTIPTIGFNVETVEFRNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANKQDLPNAMSAAEVTEKLHLNTI 148
BLAST of EWM24832.1 vs. NCBI_GenBank
Match: gi|82541272|ref|XP_724888.1| (ADP-ribosylation factor [Plasmodium yoelii yoelii 17XNL] >gi|669201307|ref|XP_008625651.1| ADP-ribosylation factor 1 [Plasmodium vinckei vinckei] >gi|1027949549|ref|XP_016655155.1| ADP-ribosylation factor, putative [Plasmodium chabaudi chabaudi] >gi|23479696|gb|EAA16453.1| ADP-ribosylation factor [Plasmodium yoelii yoelii] >gi|564277595|gb|ETB59017.1| ADP-ribosylation factor 1 [Plasmodium yoelii 17X] >gi|577146725|gb|EUD69871.1| ADP-ribosylation factor 1 [Plasmodium vinckei petteri] >gi|657008123|gb|KEG01196.1| ADP-ribosylation factor 1 [Plasmodium vinckei vinckei] >gi|675219333|emb|CDS45834.1| ADP-ribosylation factor, putative [Plasmodium chabaudi chabaudi] >gi|675225239|emb|CDS45177.1| ADP-ribosylation factor, putative [Plasmodium berghei ANKA] >gi|675230884|emb|CDU16650.1| ADP-ribosylation factor, putative [Plasmodium yoelii] >gi|675236100|emb|CDZ11181.1| ADP-ribosylation factor, putative [Plasmodium yoelii] >gi|991454471|emb|CXI07858.1| ADP-ribosylation factor, putative [Plasmodium berghei] >gi|1049459533|emb|SBT76042.1| ADP-ribosylation factor, putative [Plasmodium ovale] >gi|1061781081|emb|SCL92654.1| ADP-ribosylation factor, putative [Plasmodium berghei] >gi|1061786087|emb|SCL99094.1| ADP-ribosylation factor, putative [Plasmodium chabaudi chabaudi] >gi|1061790903|emb|SCM02559.1| ADP-ribosylation factor, putative [Plasmodium chabaudi adami] >gi|1063415358|emb|SCN22859.1| ADP-ribosylation factor, putative [Plasmodium berghei] >gi|1068919126|emb|SCL99985.1| ADP-ribosylation factor, putative [Plasmodium chabaudi chabaudi] >gi|1068923862|emb|SCM07337.1| ADP-ribosylation factor, putative [Plasmodium chabaudi adami] >gi|1068928550|emb|SCM15687.1| ADP-ribosylation factor, putative [Plasmodium berghei] >gi|1068933182|emb|SCM17481.1| ADP-ribosylation factor, putative [Plasmodium berghei] >gi|1070686373|emb|SCP03840.1| ADP-ribosylation factor, putative [Plasmodium ovale]) HSP 1 Score: 196.438 bits (498), Expect = 8.927e-61 Identity = 89/148 (60.14%), Postives = 120/148 (81.08%), Query Frame = 0
Query: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNV 148
MG L++R+ + L+ K+D R+LM+GLDAAGKTTILY+++LGE V +IPTIGFNVE VE+RNISFT+WDVGGQD++R LWRHYY + D LIFV+DS DR R+ +AR ELH +++E +L D+I+LV+ANK DLP A+S E+ L L+ +
Sbjct: 1 MGLLVSRLFNRLFQKKDVRILMVGLDAAGKTTILYKVKLGEVVTTIPTIGFNVETVEFRNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANKQDLPNAMSAAEVTEKLHLNTI 148
BLAST of EWM24832.1 vs. NCBI_GenBank
Match: gi|66358980|ref|XP_626668.1| (ARF1/2 like small GTpase [Cryptosporidium parvum Iowa II] >gi|46228393|gb|EAK89292.1| ARF1/2 like small GTpase [Cryptosporidium parvum Iowa II]) HSP 1 Score: 196.438 bits (498), Expect = 1.104e-60 Identity = 91/148 (61.49%), Postives = 118/148 (79.73%), Query Frame = 0
Query: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNV 148
MG +T++ L+GK+D R+LM+GLDAAGKTTILY+L+LGE V +IPTIGFNVE VEY+NISFT+WDVGGQD++R LWRHYY + D LIFVIDS DR R+++AR EL +L E +L D++LLV+ANK DLP A+S ++ LQL +
Sbjct: 7 MGLALTKIWRNLFGKKDMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVIDSNDRERINDARDELARMLGEDELRDAVLLVFANKQDLPNAMSATDITEKLQLSGI 154 The following BLAST results are available for this feature:
BLAST of EWM24832.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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