EWM24825.1, cds5838 (CDS) Nannochloropsis gaditana

Overview
NameEWM24825.1
Unique Namecds5838
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:995544..995642 +
Alignment locationCM002466.1:995868..996011 +
Alignment locationCM002466.1:996303..996395 +
Alignment locationCM002466.1:996520..996721 +
Alignment locationCM002466.1:996881..997035 +
Alignment locationCM002466.1:997216..997434 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24825.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100234g1.1029.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:995544..995642 +
CM002466.1supercontigCM002466.1:995868..996011 +
CM002466.1supercontigCM002466.1:996303..996395 +
CM002466.1supercontigCM002466.1:996520..996721 +
CM002466.1supercontigCM002466.1:996881..997035 +
CM002466.1supercontigCM002466.1:997216..997434 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24825.1 vs. NCBI_GenBank
Match: gi|585106421|gb|EWM24825.1| (hypothetical protein Naga_100234g1 [Nannochloropsis gaditana])

HSP 1 Score: 603.594 bits (1555), Expect = 0.000e+0
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0 
Query:    1 MREVAVQIETLPPPMQEKSYKLMNRTVVNLQDKLGFILASGVSWETILRLIQAELRAFREEGIDPLSESVARELFFVAASKVFPDLPLDEWNRNVESLSDRTRKLWWESQMKMDDLLPPSSSYPSSTLEGPPSLPSAMRLRSPSSLYSSYSSSNRTLAAAATGNDLKRWLESLEAALILAGVGIVDDSGKTPTAALREVGENLERLKQQSEDLLLLIEDEIRYIAKGGKPETSIKHLGESVKRYASEYTRLVPEEWRKSLNLPPASPLPPPPYKKREEIVHEIIEIDEEELEAMVGDEEGDWF 303
            MREVAVQIETLPPPMQEKSYKLMNRTVVNLQDKLGFILASGVSWETILRLIQAELRAFREEGIDPLSESVARELFFVAASKVFPDLPLDEWNRNVESLSDRTRKLWWESQMKMDDLLPPSSSYPSSTLEGPPSLPSAMRLRSPSSLYSSYSSSNRTLAAAATGNDLKRWLESLEAALILAGVGIVDDSGKTPTAALREVGENLERLKQQSEDLLLLIEDEIRYIAKGGKPETSIKHLGESVKRYASEYTRLVPEEWRKSLNLPPASPLPPPPYKKREEIVHEIIEIDEEELEAMVGDEEGDWF
Sbjct:    1 MREVAVQIETLPPPMQEKSYKLMNRTVVNLQDKLGFILASGVSWETILRLIQAELRAFREEGIDPLSESVARELFFVAASKVFPDLPLDEWNRNVESLSDRTRKLWWESQMKMDDLLPPSSSYPSSTLEGPPSLPSAMRLRSPSSLYSSYSSSNRTLAAAATGNDLKRWLESLEAALILAGVGIVDDSGKTPTAALREVGENLERLKQQSEDLLLLIEDEIRYIAKGGKPETSIKHLGESVKRYASEYTRLVPEEWRKSLNLPPASPLPPPPYKKREEIVHEIIEIDEEELEAMVGDEEGDWF 303
The following BLAST results are available for this feature:
BLAST of EWM24825.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106421|gb|EWM24825.1|0.000e+0100.00hypothetical protein Naga_100234g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5853rna5853Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications