EWM24838.1, cds5835 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM24838.1 vs. NCBI_GenBank
Match: gi|585106437|gb|EWM24838.1| (hypothetical protein Naga_100887g5, partial [Nannochloropsis gaditana]) HSP 1 Score: 277.33 bits (708), Expect = 1.875e-94 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
Query: 1 EVGGGGEDTEVQRLPFPVSLFLLLMLPSQVRSINIKENLATDGRSIEEKQAAVRAELQAKTDAAARQEAIAHFRAILLETTQTETEKMQESVSWAKFGENSLKDFKWSLIQEAIAAAEGIDFSEVPSFLLRENPVVWT 138
EVGGGGEDTEVQRLPFPVSLFLLLMLPSQVRSINIKENLATDGRSIEEKQAAVRAELQAKTDAAARQEAIAHFRAILLETTQTETEKMQESVSWAKFGENSLKDFKWSLIQEAIAAAEGIDFSEVPSFLLRENPVVWT
Sbjct: 1 EVGGGGEDTEVQRLPFPVSLFLLLMLPSQVRSINIKENLATDGRSIEEKQAAVRAELQAKTDAAARQEAIAHFRAILLETTQTETEKMQESVSWAKFGENSLKDFKWSLIQEAIAAAEGIDFSEVPSFLLRENPVVWT 138
BLAST of EWM24838.1 vs. NCBI_GenBank
Match: gi|971514088|dbj|GAQ84143.1| (hypothetical protein KFL_001770290 [Klebsormidium nitens]) HSP 1 Score: 79.337 bits (194), Expect = 7.722e-15 Identity = 53/146 (36.30%), Postives = 80/146 (54.79%), Query Frame = 0
Query: 3 GGGGEDTEVQRLPFPVSLFLLLM------LPSQVRSINIKENLATDGRSIEEKQAAVRAELQAKTDAAARQEAI----AHFRAILLETTQTETEKMQESVSWAKFGENSLKDFKWSLIQEAIAAAEGIDFSEVPSFLLRENPVVWT 138
G G E+++ L FP + + V I IK+ L D R +AA+RA+++A A A ++ R +LLET++ + +K+ SVSWAKFGE SL+DFKW+L+ E +A E I+F E +FL R+ V +T
Sbjct: 207 GMGQEESKSFTLTFPADYKAVPLRNVAARFTVTVHEIGIKKMLEKDPRP----EAAIRADIEADLRATAERKTNDLIDQEVRRVLLETSEADVDKVAASVSWAKFGEKSLQDFKWNLLLEEVARNEKIEFEEAKAFLRRQATVNFT 348
BLAST of EWM24838.1 vs. NCBI_GenBank
Match: gi|298712982|emb|CBJ26884.1| (FKBP-type peptidyl-prolyl cis-trans isomerase [Ectocarpus siliculosus]) HSP 1 Score: 66.6254 bits (161), Expect = 1.363e-10 Identity = 53/145 (36.55%), Postives = 76/145 (52.41%), Query Frame = 0
Query: 2 VGGGGEDTEVQRLPFPVSLFLLLMLPSQ------VRSINIKENLATDGRSIEEKQAAVRAE----LQAKTDAAARQEAIAHFRAILLETTQTETEKMQESVSWAKFGENSLKDFKWSLIQEAIAAAEGIDFSEVPSFLLRENPVV 136
VG G +T+V FP + + Q V++I KE + RS +E +AA+R + ++ +TD A EA+ F LL + +K+ +VSWAKFGE S DFKW+ I+E IA AEGI+ V FL E V+
Sbjct: 109 VGMGQMETKVFPATFPEDFEIEGLRGKQALVQAVVKNIARKEVKEPETRSDDEVRAALRVKGEQTVKNRTDKAV-DEAVKKF---LLSSCNVNADKVLNAVSWAKFGEQSTLDFKWNCIKEKIAVAEGIEPRAVVEFLRDEAEVI 249 The following BLAST results are available for this feature:
BLAST of EWM24838.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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