EWM24845.1, cds5831 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24845.1 vs. NCBI_GenBank
Match: gi|585106445|gb|EWM24845.1| (sensitivity to red light reduced protein [Nannochloropsis gaditana]) HSP 1 Score: 885.174 bits (2286), Expect = 0.000e+0 Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 0
Query: 1 MPLMGGRKQWGGWPARQCSVLSAYTNSPVRNHDIKHEMIGSDDEDEEARERASWTTVTSRKKGKGGKERGRRLSYGSQADTSSFHHQTHYSRDRDRALSSPEDIAEEGSRLLVAVEAAKSCLASTTFFLNLENALLTRSTKKVADNEEENNTREIRSLVCYGLGSIQSTNSHALWQLACVCLIKDRLNVHLSPPRPSTTLPSHPPSTSSSVCPLSPSSTSQVQYLTLPLVEAEMFDPVFDDVDSYLLNRLGWRVIPHNEECKRPARVPTLFFMPCCHRRLYSNLLWANWSPESLKNVVVVGNSLKSYQERAWALEEDLDPTDCVLPLLPWVREMPLSWRTRTGSGGTTGCWPGMGREEEKGGPKGEARGMDDRVVKTAFVDMRVVDFVNLPPPVGEAGGSEEKDVAKRSLWHRRPPEYRAGTASSKGGV 429
MPLMGGRKQWGGWPARQCSVLSAYTNSPVRNHDIKHEMIGSDDEDEEARERASWTTVTSRKKGKGGKERGRRLSYGSQADTSSFHHQTHYSRDRDRALSSPEDIAEEGSRLLVAVEAAKSCLASTTFFLNLENALLTRSTKKVADNEEENNTREIRSLVCYGLGSIQSTNSHALWQLACVCLIKDRLNVHLSPPRPSTTLPSHPPSTSSSVCPLSPSSTSQVQYLTLPLVEAEMFDPVFDDVDSYLLNRLGWRVIPHNEECKRPARVPTLFFMPCCHRRLYSNLLWANWSPESLKNVVVVGNSLKSYQERAWALEEDLDPTDCVLPLLPWVREMPLSWRTRTGSGGTTGCWPGMGREEEKGGPKGEARGMDDRVVKTAFVDMRVVDFVNLPPPVGEAGGSEEKDVAKRSLWHRRPPEYRAGTASSKGGV
Sbjct: 1 MPLMGGRKQWGGWPARQCSVLSAYTNSPVRNHDIKHEMIGSDDEDEEARERASWTTVTSRKKGKGGKERGRRLSYGSQADTSSFHHQTHYSRDRDRALSSPEDIAEEGSRLLVAVEAAKSCLASTTFFLNLENALLTRSTKKVADNEEENNTREIRSLVCYGLGSIQSTNSHALWQLACVCLIKDRLNVHLSPPRPSTTLPSHPPSTSSSVCPLSPSSTSQVQYLTLPLVEAEMFDPVFDDVDSYLLNRLGWRVIPHNEECKRPARVPTLFFMPCCHRRLYSNLLWANWSPESLKNVVVVGNSLKSYQERAWALEEDLDPTDCVLPLLPWVREMPLSWRTRTGSGGTTGCWPGMGREEEKGGPKGEARGMDDRVVKTAFVDMRVVDFVNLPPPVGEAGGSEEKDVAKRSLWHRRPPEYRAGTASSKGGV 429
BLAST of EWM24845.1 vs. NCBI_GenBank
Match: gi|950900942|ref|XP_014530248.1| (biofilm pga synthesis protein [Blastocystis sp. subtype 4] >gi|902864859|gb|KNB46805.1| biofilm pga synthesis protein [Blastocystis sp. subtype 4]) HSP 1 Score: 113.62 bits (283), Expect = 1.810e-23 Identity = 64/184 (34.78%), Postives = 93/184 (50.54%), Query Frame = 0
Query: 154 EIRSLVCYGLGSIQSTNSHALWQLACVCLIKDRLNVHLSPPRPSTTLPSHPPSTSSSVCPLSPSSTSQVQYLTLPLVEAEMFDPVFDDVDSYLLNRLGWRVIPHNEECKRPARVPTLFFMPCCHRRLYSNLLWANWSPESLKNVVVVGNSLKSYQERAWALEEDLDPTDCVLPLLPWVREMPLS 337
+I S++ YGLGS+ N + +Q AC +++ LN++ S E++DP D+ + + LG VIPHNEE KR TLFFMP C LY+ L+W+NW E +KN+VVVGNS Y + A E++ DPT+ + PLLP++ E P+S
Sbjct: 31 KIESMIAYGLGSVND-NLISQYQFACALALRNELNINAS---------------------------------------LEIYDPAMGREDAAIASELGCEVIPHNEEAKRVVLRKTLFFMPHCGFNLYNGLMWSNWG-EHMKNLVVVGNSFSQYAQLMTA-EQNKDPTNAIYPLLPYISEAPIS 172
BLAST of EWM24845.1 vs. NCBI_GenBank
Match: gi|754345938|ref|XP_004364036.2| (SRR1-like protein [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 105.916 bits (263), Expect = 5.642e-22 Identity = 72/190 (37.89%), Postives = 94/190 (49.47%), Query Frame = 0
Query: 155 IRSLVCYGLGSIQSTNSHALWQLACVCLIKDRLNVHLSPPRPSTTLPSHPPSTSSSVCPLSPSSTSQVQYLTLPLVEAEMFDPVFDDVDSYLLNRLGWRVIPHNEECKRPARVPTLFFMPCCHRRLYSNLLWANWSPESLKNVVVVGNSLKSYQERA--WALEEDLDPTDCVLPLLPWVREMPL-SWRTR 341
IR +VCYG+GS+ S + A +Q A +CL L HL P + +FDPVF D + +LG +I NEE KR A VPTLF+MP C RLY+NLLWANWSP +L V+++GN L Y ER + + L + +LP VRE PL S+R R
Sbjct: 118 IREIVCYGIGSL-SDSVLARYQFA-LCL---ALQEHLKIPG-----------------------------------QVHVFDPVFTVQDIAAVQQLGGAIISENEEAKRKASVPTLFYMPHCGGRLYNNLLWANWSPAALARVLILGNPLSRYAERMSNASFQTAL---PYIAQVLPAVRETPLPSFRVR 264
BLAST of EWM24845.1 vs. NCBI_GenBank
Match: gi|765551561|gb|KJE92182.1| (SRR1-like protein [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 101.293 bits (251), Expect = 1.543e-20 Identity = 54/114 (47.37%), Postives = 70/114 (61.40%), Query Frame = 0
Query: 231 EAEMFDPVFDDVDSYLLNRLGWRVIPHNEECKRPARVPTLFFMPCCHRRLYSNLLWANWSPESLKNVVVVGNSLKSYQERA--WALEEDLDPTDCVLPLLPWVREMPL-SWRTR 341
+ +FDPVF D + +LG +I NEE KR A VPTLF+MP C RLY+NLLWANWSP +L V+++GN L Y ER + + L + +LP VRE PL S+R R
Sbjct: 135 QVHVFDPVFTVQDIAAVQQLGGAIISENEEAKRKASVPTLFYMPHCGGRLYNNLLWANWSPAALARVLILGNPLSRYAERMSNASFQTAL---PYIAQVLPAVRETPLPSFRVR 245
BLAST of EWM24845.1 vs. NCBI_GenBank
Match: gi|1032151737|gb|OAO15273.1| (Biotin--protein ligase [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 101.679 bits (252), Expect = 1.893e-19 Identity = 60/187 (32.09%), Postives = 92/187 (49.20%), Query Frame = 0
Query: 151 NTREIRSLVCYGLGSIQSTNSHALWQLACVCLIKDRLNVHLSPPRPSTTLPSHPPSTSSSVCPLSPSSTSQVQYLTLPLVEAEMFDPVFDDVDSYLLNRLGWRVIPHNEECKRPARVPTLFFMPCCHRRL-YSNLLWANWSPESLKNVVVVGNSLKSYQERAWALEEDLDPTDCVLPLLPWVREMPL 336
N +I S+V YGLGS+ N + +Q AC +++ L ++ S E+FDP D+ + + LG VIPHNEE KR TLFFMP C L Y+ L+W+NW +S++NV ++GNS +Y E + ++ + T+ + PL+P++RE PL
Sbjct: 28 NVGKIESMVAYGLGSVND-NLTSQYQFACALALRENLGINGS---------------------------------------IEIFDPAMGKEDAAIASELGCEVIPHNEEAKRVVLRKTLFFMPHCGFNLWYNGLMWSNWG-KSMRNVCLIGNSFNAYSESLSEMHKNSE-TNAITPLIPYIREFPL 172
BLAST of EWM24845.1 vs. NCBI_GenBank
Match: gi|765551562|gb|KJE92183.1| (SRR1-like protein, variant [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 95.1301 bits (235), Expect = 2.046e-18 Identity = 43/80 (53.75%), Postives = 54/80 (67.50%), Query Frame = 0
Query: 231 EAEMFDPVFDDVDSYLLNRLGWRVIPHNEECKRPARVPTLFFMPCCHRRLYSNLLWANWSPESLKNVVVVGNSLKSYQER 310
+ +FDPVF D + +LG +I NEE KR A VPTLF+MP C RLY+NLLWANWSP +L V+++GN L Y ER
Sbjct: 135 QVHVFDPVFTVQDIAAVQQLGGAIISENEEAKRKASVPTLFYMPHCGGRLYNNLLWANWSPAALARVLILGNPLSRYAER 214
BLAST of EWM24845.1 vs. NCBI_GenBank
Match: gi|567983554|gb|ETL33944.1| (hypothetical protein L916_13713 [Phytophthora parasitica]) HSP 1 Score: 91.6633 bits (226), Expect = 6.365e-17 Identity = 62/204 (30.39%), Postives = 102/204 (50.00%), Query Frame = 0
Query: 139 STKKVADNEEEN-NTREIR----SLVCYGLGSIQSTNSHALWQLACVCLIKDRLNVHLSPPRPSTTLPSHPPSTSSSVCPLSPSSTSQVQYLTLPLVEAEMFDPVFDDVDSYLLNRLGWRVIPHNEECKRPARVPTLFFMPCCHRRLYSNLLWANWSPESLKNVVVVGNSLKSYQERAWALEEDLDPTDCVLPLLPWVREMPLS 337
+ KK D + E +T E+ +LV YGLGS ++ S+AL QL + +++ L L L+ S+ +Q+ AE+FDP + D+ + ++I NE +R T+FFMP C + LY N+L NW P ++KN+V++GNS +Y +R +E + ++ +LP+V E+PLS
Sbjct: 88 TVKKSVDKDVEGVDTEEVTDHSPTLVGYGLGSFCAS-SNALHQLGFLVALRESLESRLRKSNGDV---------------LAVESSDTIQHC------AEIFDPAMNKSDAVIAEHFQLKIILENEHGRRQVDSNTVFFMPHCGKTLYQNVLACNWGP-AIKNLVIIGNSFSAYGDRVLGSKERDEL--LLVSVLPYVDEVPLS 266
BLAST of EWM24845.1 vs. NCBI_GenBank
Match: gi|390345817|ref|XP_003726417.1| (PREDICTED: SRR1-like protein [Strongylocentrotus purpuratus]) HSP 1 Score: 88.9669 bits (219), Expect = 1.533e-16 Identity = 42/95 (44.21%), Postives = 63/95 (66.32%), Query Frame = 0
Query: 234 MFDPVFDDVDSYLLNRLGWRVIPHNEECKRPARVPTLFFMPCCHRRLYSNLLWANWSPESLKNVVVVGNSLKSYQERAWA--LEEDLDPTDCVLP 326
++DP F DV+ +L +LG+ +I NEE KR PTLFFMP C + LY+NLLWANW + L N++++GNS ++ ER A L+E++ ++P
Sbjct: 92 LYDPNFSDVEKQVLEKLGYSLIDKNEEGKRQVTEPTLFFMPHCGKPLYNNLLWANWG-QRLSNLIILGNSFNNFSERFTARQLKEEVPYIHKIIP 185
BLAST of EWM24845.1 vs. NCBI_GenBank
Match: gi|260782072|ref|XP_002586116.1| (hypothetical protein BRAFLDRAFT_255349 [Branchiostoma floridae] >gi|229271207|gb|EEN42127.1| hypothetical protein BRAFLDRAFT_255349, partial [Branchiostoma floridae]) HSP 1 Score: 85.1149 bits (209), Expect = 1.737e-16 Identity = 51/152 (33.55%), Postives = 75/152 (49.34%), Query Frame = 0
Query: 159 VCYGLGSIQSTNSHALWQLACVCLIKDRLNVHLSPPRPSTTLPSHPPSTSSSVCPLSPSSTSQVQYLTLPLVEAEMFDPVFDDVDSYLLNRLGWRVIPHNEECKRPARVPTLFFMPCCHRRLYSNLLWANWSPESLKNVVVVGNSLKSYQER 310
VCYGLG S + A +QL + +++D L V P + ++DP+F + LL +LG+++I NEE KRP TLF+MP C + LY+NLLW+NW P+ L N+V++GNSL + R
Sbjct: 1 VCYGLGRFSSCVT-ARYQLGFLLMLRDVLKV------PGSCF---------------------------------VYDPLFSPSEKQLLEKLGFQLIQKNEEGKRPVNKRTLFYMPHCGKPLYNNLLWSNWGPQ-LSNLVILGNSLSNMALR 111
BLAST of EWM24845.1 vs. NCBI_GenBank
Match: gi|1176117261|ref|XP_020629791.1| (SRR1-like protein isoform X1 [Orbicella faveolata]) HSP 1 Score: 89.7373 bits (221), Expect = 1.854e-16 Identity = 68/249 (27.31%), Postives = 112/249 (44.98%), Query Frame = 0
Query: 96 RALSSPEDIAEEGSRLLVAVEAAKSCLASTTFFLNLE----NALLTRSTKKVADNEEENN----TREIRSLVCYGLGSIQSTNSHALWQLACVCLIKDRLNVHLSPPRPSTTLPSHPPSTSSSVCPLSPSSTSQVQYLTLPLVEAEMFDPVFDDVDSYLLNRLGWRVIPHNEECKRPARVPTLFFMPCCHRRLYSNLLWANWSPESLKNVVVVGNSLKSYQERAWALEEDLDPTDCVLPLLPWVREMPL 336
++ +S E I + + L +E ++ ++ + FF ++ N +T VA++E N +VCYG+G + S A +Q A + L+K+ L + + +++P F D L+ G +I HNEE KR TLFFM C + LY+++LWANW P L NVV++GN L SYQER + + + T + +LP++ E P+
Sbjct: 32 KSRTSSETITCDANELRTKIEKCRAEVSGSDFFTSVRELFYNGYCVDNTSNVAESERPNTKVIPQEPFTDIVCYGIGKLTSC-PIARYQFAFLLLLKEFLQI---------------------------------------AGQCFIYEPQFSKDDKSLVGDFGCSLIEHNEEGKRKVDSSTLFFMLHCGKPLYNSVLWANWGP-GLSNVVILGNRLTSYQERLPSRQLRTE-TPYIYNILPYMMETPI 238 The following BLAST results are available for this feature:
BLAST of EWM24845.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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