EWM30088.1, cds583 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30088.1 vs. NCBI_GenBank
Match: gi|585112728|gb|EWM30088.1| (FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Nannochloropsis gaditana]) HSP 1 Score: 527.324 bits (1357), Expect = 0.000e+0 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0 Query: 1 MAMREAGKLTMRSRRLQVRGKDKHSLRWQDRTRILFSPFSLSLRRYTTLSAADTTATADIFEGLTKNKKAYTAIYKRDARPPVVILGSGWAGFQLARDLNKAKFDVTVISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIPGIKFYQARATRLNFEERQVACEEYYLKERFEVNYEYLILAVGSTTNTFNVPGVCPDNHVYFLKQLSDARAIRSRIIECFERASYPDLPSAAQARLLSFLVVGGGAHICGVCE 254 MAMREAGKLTMRSRRLQVRGKDKHSLRWQDRTRILFSPFSLSLRRYTTLSAADTTATADIFEGLTKNKKAYTAIYKRDARPPVVILGSGWAGFQLARDLNKAKFDVTVISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIPGIKFYQARATRLNFEERQVACEEYYLKERFEVNYEYLILAVGSTTNTFNVPGVCPDNHVYFLKQLSDARAIRSRIIECFERASYPDLPSAAQARLLSFLVVGGGAHICGVCE Sbjct: 1 MAMREAGKLTMRSRRLQVRGKDKHSLRWQDRTRILFSPFSLSLRRYTTLSAADTTATADIFEGLTKNKKAYTAIYKRDARPPVVILGSGWAGFQLARDLNKAKFDVTVISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIPGIKFYQARATRLNFEERQVACEEYYLKERFEVNYEYLILAVGSTTNTFNVPGVCPDNHVYFLKQLSDARAIRSRIIECFERASYPDLPSAAQARLLSFLVVGGGAHICGVCE 254
BLAST of EWM30088.1 vs. NCBI_GenBank
Match: gi|553185261|ref|XP_005854223.1| (NADH dehydrogenase [Nannochloropsis gaditana CCMP526] >gi|422294837|gb|EKU22137.1| NADH dehydrogenase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 344.354 bits (882), Expect = 6.408e-115 Identity = 171/206 (83.01%), Postives = 178/206 (86.41%), Query Frame = 0 Query: 46 YTTLSAADTTATADIFEGLTKNKKAYTAIYKRDARPPVVILGSGWAGFQLARDLNKAKFDVTVISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIPGIKFYQARATRLNFEERQVACEEYYLKERFEVNYEYLILAVGSTTNTFNVPGVCPDNHVYFLKQLSDARAIRSRIIECFERASYPDLPSAAQARLLSFLVVGGGAHICG 251 YTTLSAADTTATADIFEGLTKNKKAYTAIYKRDARPPVVILGSGWAGFQLARDLNKAKFDVTVISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIPGIKFYQARATRLNFEERQVACEEYYLKERFEVNYEYLILAVGSTTNTFNVPGVCPDNHVYFLKQLS+ + + YPDL ++S ++ HI G Sbjct: 9 YTTLSAADTTATADIFEGLTKNKKAYTAIYKRDARPPVVILGSGWAGFQLARDLNKAKFDVTVISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIPGIKFYQARATRLNFEERQVACEEYYLKERFEVNYEYLILAVGSTTNTFNVPGVCPDNHVYFLKQLSELYDFLRKDVHIL----YPDL-----EHMVSVTLIEASDHILG 205
BLAST of EWM30088.1 vs. NCBI_GenBank
Match: gi|299116714|emb|CBN76274.1| (NADH dehydrogenase (ubiquinone) (Partial), partial [Ectocarpus siliculosus]) HSP 1 Score: 216.083 bits (549), Expect = 2.036e-65 Identity = 97/164 (59.15%), Postives = 130/164 (79.27%), Query Frame = 0 Query: 83 VVILGSGWAGFQLARDLNKAKFDVTVISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIPGIKFYQARATRLNFEERQVACEEYYLKERFEVNYEYLILAVGSTTNTFNVPGVCPDNHVYFLKQLSDARAIRSRIIECFERASYPDLPSAAQARLLSFLVVGGG 246 +VILG+GW GF++AR+++K K+DVTVIS RNHFLFTPLLPSTTVGTLEFR IQEPVRTI G+++ QA ++F+ + + C+E + EV+Y+ L++A G+ NTF VPGV +NHV+FLKQL DAR IR+R++ECFERA+ P + ++RLLSF+VVGGG Sbjct: 20 LVILGTGWGGFRVAREVDKKKYDVTVISPRNHFLFTPLLPSTTVGTLEFRCIQEPVRTIKGLQYLQASVLSVDFKSKTLRCQEVFKGTEHEVDYDSLVIATGAQNNTFGVPGVSEENHVFFLKQLGDARNIRNRLLECFERAASPFISEEERSRLLSFVVVGGG 183
BLAST of EWM30088.1 vs. NCBI_GenBank
Match: gi|224013718|ref|XP_002296523.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220968875|gb|EED87219.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 200.675 bits (509), Expect = 1.138e-58 Identity = 100/171 (58.48%), Postives = 121/171 (70.76%), Query Frame = 0 Query: 83 VVILGSGWAGFQLARDLNKAKFDVTVISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIPGI-KFYQARATRLNFEERQVACEEYYLKERFEVNYEYLILAVGSTTNTFNVPGV--CPDNHVYFLKQLSDARAIRSRIIECFERASYPDLPSAAQARLLSFLVVGGGAHIC 250 VVILGSGW G+ LAR L K FDV V+S NHFLFTPLLPST VGTLEFR IQEPVRTI G+ +YQA+AT ++ E R V CE+ Y +F+V Y+YL++A G +NTFN + V+FLK L AR IR+RI+ECFERAS P +P + RLLSF+VVGGG C Sbjct: 2 VVILGSGWGGYTLARRLQKELFDVRVVSPANHFLFTPLLPSTAVGTLEFRAIQEPVRTIKGLGHYYQAKATNIDLENRVVTCEDLYKGVKFDVAYDYLVVAAGKKSNTFNTHNIQRLEGVVVFFLKHLYHARQIRNRIVECFERASNPTIPDVQRDRLLSFIVVGGGPTSC 172
BLAST of EWM30088.1 vs. NCBI_GenBank
Match: gi|1072228116|gb|OEU12854.1| (FAD/NAD(P)-binding domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 200.675 bits (509), Expect = 2.819e-58 Identity = 98/178 (55.06%), Postives = 130/178 (73.03%), Query Frame = 0 Query: 78 DARPPVVILGSGWAGFQLARDLNKAKFDVTVISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIPGI-KFYQARATRLNFEERQVACEEYYLKERFEVNYEYLILAVGSTTNTFNVPGVCPDNH----VYFLKQLSDARAIRSRIIECFERASYPDLPSAAQARLLSFLVVGGGAHIC 250 + +P +VILG+GW G+ LA L+K KFDV VIS NHFLFTPLLP T VGTLEFR IQEPVRTI G+ ++YQA+A L+ + + C++ + KE F++ Y++LI+A G+ TNTFN+ G+ D+H V FLK L AR IR+RI+ECFERAS P++ + + RLLSF+VVGGG C Sbjct: 20 NNKPRIVILGTGWGGYTLANRLDKNKFDVRVISPANHFLFTPLLPGTAVGTLEFRAIQEPVRTIRGLGEYYQAKARTLDTTSKTITCQDIFKKELFDIQYDFLIIATGNKTNTFNIEGI--DSHEGKSVLFLKHLYHARQIRNRILECFERASNPNISVSERQRLLSFIVVGGGPTSC 195
BLAST of EWM30088.1 vs. NCBI_GenBank
Match: gi|1210518898|dbj|GAX22180.1| (hypothetical protein FisN_19Lh240 [Fistulifera solaris]) HSP 1 Score: 189.119 bits (479), Expect = 4.487e-53 Identity = 97/181 (53.59%), Postives = 124/181 (68.51%), Query Frame = 0 Query: 76 KRDARPPVVILGSGWAGFQLARDLNKAKFDVTVISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIPGI-KFYQARATRLNFEERQ---VACEEYYLKERFEVNYEYLILAVGSTTNTFNVPGVC--PDNHVYFLKQLSDARAIRSRIIECFERASYPDLPSAAQARLLSFLVVGGGAHIC 250 K+ +P VVILGSGWAG LAR L+K K+DV +IS NHFLFT LLPST VGTLEFR IQEPVRTI G+ ++YQA+A +L + V C + + F V Y+YL++A G+ TNTF PG+ V+FLK L AR IR+R++ECFERAS P++ + RLLSF++VGGG C Sbjct: 39 KKTKKPRVVILGSGWAGNTLARRLDKQKYDVRLISPANHFLFTSLLPSTAVGTLEFRAIQEPVRTIAGLGEYYQAKALQLGVTDEGKTVVHCADLFKGHEFPVRYDYLVVAAGNKTNTFQTPGIAEREGKEVFFLKHLYHARQIRNRVLECFERASNPNITDFERDRLLSFVIVGGGPTSC 219
BLAST of EWM30088.1 vs. NCBI_GenBank
Match: gi|1210521666|dbj|GAX19656.1| (hypothetical protein FisN_19Hh240 [Fistulifera solaris]) HSP 1 Score: 187.193 bits (474), Expect = 1.727e-52 Identity = 97/177 (54.80%), Postives = 121/177 (68.36%), Query Frame = 0 Query: 80 RPPVVILGSGWAGFQLARDLNKAKFDVTVISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIPGI-KFYQARATRLNFEERQ---VACEEYYLKERFEVNYEYLILAVGSTTNTFNVPGVC--PDNHVYFLKQLSDARAIRSRIIECFERASYPDLPSAAQARLLSFLVVGGGAHIC 250 +P VVILGSGWAG LAR L+K K+DV +IS NHFLFT LLPST VGTLEFR IQEPVRTI G+ ++YQA+A L E V C + + F V Y+YL++A G+ TNTF PG+ V+FLK L AR IR+R++ECFERAS P++ + RLLSF++VGGG C Sbjct: 34 KPRVVILGSGWAGNTLARRLDKQKYDVRLISPANHFLFTSLLPSTAVGTLEFRAIQEPVRTIAGLGEYYQAKALSLGVTEEGKTVVHCADLFKGHEFPVRYDYLVVAAGNKTNTFQTPGIAEREGKEVFFLKHLYHARQIRNRVLECFERASNPNITDFERDRLLSFVIVGGGPTSC 210
BLAST of EWM30088.1 vs. NCBI_GenBank
Match: gi|727152675|emb|CEG65173.1| (hypothetical protein RMATCC62417_02009 [Rhizopus microsporus]) HSP 1 Score: 182.956 bits (463), Expect = 3.631e-52 Identity = 90/173 (52.02%), Postives = 124/173 (71.68%), Query Frame = 0 Query: 78 DARPPVVILGSGWAGFQLARDLNKAKFDVTVISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIP-GIKFYQARATRLNFEERQVACE---EYYLKERFEVNYEYLILAVGSTTNTFNVPGVCPDNHVYFLKQLSDARAIRSRIIECFERASYPDLPSAAQARLLSFLVVGGG 246 + + V+ILGSGWAGF+L RDL+K K+DV+V+S RN+F+FTPLL ST+VGTLEFR I EPVR+ IK++QA ++ + R C + ++RF ++Y+ LI+AVGS +NTF +PGV +H +FLK ++DAR IR R+IECFE AS P + +A LL F+VVGGG Sbjct: 72 ETKEKVIILGSGWAGFKLMRDLDKEKYDVSVVSPRNYFVFTPLLASTSVGTLEFRCITEPVRSYSKNIKYHQAYCDEIDLDSRVAHCTYNVDDIQQKRFTLDYDKLIIAVGSYSNTFGIPGV--KDHAFFLKDVNDARKIRKRLIECFENASQPGVSDKDKADLLHFVVVGGG 242
BLAST of EWM30088.1 vs. NCBI_GenBank
Match: gi|727140788|emb|CEG76776.1| (hypothetical protein RMATCC62417_11628 [Rhizopus microsporus]) HSP 1 Score: 181.8 bits (460), Expect = 6.046e-52 Identity = 89/173 (51.45%), Postives = 124/173 (71.68%), Query Frame = 0 Query: 78 DARPPVVILGSGWAGFQLARDLNKAKFDVTVISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIP-GIKFYQARATRLNFEERQVACE---EYYLKERFEVNYEYLILAVGSTTNTFNVPGVCPDNHVYFLKQLSDARAIRSRIIECFERASYPDLPSAAQARLLSFLVVGGG 246 + + V+ILGSGWAGF+L RDL+K ++DV+V+S RN+F+FTPLL ST+VGTLEFR I EPVR+ IK++QA ++ + R C + ++RF ++Y+ LI+AVGS +NTF +PGV +H +FLK ++DAR IR R+IECFE AS P + +A LL F+VVGGG Sbjct: 72 ETKEKVIILGSGWAGFKLMRDLDKERYDVSVVSPRNYFVFTPLLASTSVGTLEFRCITEPVRSYSKNIKYHQAYCDEIDLDSRVAHCTYNVDDIQQKRFTLDYDKLIIAVGSYSNTFGIPGV--KDHAFFLKDVNDARKIRKRLIECFENASQPGVSDKDKADLLHFVVVGGG 242
BLAST of EWM30088.1 vs. NCBI_GenBank
Match: gi|727152674|emb|CEG65172.1| (hypothetical protein RMATCC62417_02009 [Rhizopus microsporus]) HSP 1 Score: 184.111 bits (466), Expect = 1.493e-51 Identity = 90/173 (52.02%), Postives = 124/173 (71.68%), Query Frame = 0 Query: 78 DARPPVVILGSGWAGFQLARDLNKAKFDVTVISDRNHFLFTPLLPSTTVGTLEFRTIQEPVRTIP-GIKFYQARATRLNFEERQVACE---EYYLKERFEVNYEYLILAVGSTTNTFNVPGVCPDNHVYFLKQLSDARAIRSRIIECFERASYPDLPSAAQARLLSFLVVGGG 246 + + V+ILGSGWAGF+L RDL+K K+DV+V+S RN+F+FTPLL ST+VGTLEFR I EPVR+ IK++QA ++ + R C + ++RF ++Y+ LI+AVGS +NTF +PGV +H +FLK ++DAR IR R+IECFE AS P + +A LL F+VVGGG Sbjct: 72 ETKEKVIILGSGWAGFKLMRDLDKEKYDVSVVSPRNYFVFTPLLASTSVGTLEFRCITEPVRSYSKNIKYHQAYCDEIDLDSRVAHCTYNVDDIQQKRFTLDYDKLIIAVGSYSNTFGIPGV--KDHAFFLKDVNDARKIRKRLIECFENASQPGVSDKDKADLLHFVVVGGG 242 The following BLAST results are available for this feature:
BLAST of EWM30088.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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