EWM24842.1, cds5829 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24842.1 vs. NCBI_GenBank
Match: gi|585106442|gb|EWM24842.1| (scavenger receptor class member 2 [Nannochloropsis gaditana]) HSP 1 Score: 875.544 bits (2261), Expect = 0.000e+0 Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0 Query: 1 MASGHSEADEAWQKPEESRRQQDEILARALTLPPDDDSQMGADDMSSGIRGHREDSIASDTSSLDPSDSARGYRHASSSDIEAAMSERPSTMSYSSSMTSSAAYPPTPISYPAAAMAGTAPLRDRSESRLSATTTPPPSRRVTVSRWTRNIGLLLLAIGLVALGSAIVSHTYLPEWRDKRALESLVVDSPDHPNYAAWVNHASPSSAGRGEGDSPTYQRFYFFHLVNSKGFLQGKKPFYLEKGPYTFRQTKKKVDVNFSEKGTLVSYVTLVQNKYSPEQSGKDVALSDTVTMLNLAYATAVATFGSESNLLRYGSRRALMEIERAWESTFLPTLKERAVAATAVKTLALIDEALTKLNYQEDGTAIRWGGGCASAGMVQQCGFEKAAFLKAMIGKERKEDAELYHMCLDTGLGSEPGQVGRAMI 424 MASGHSEADEAWQKPEESRRQQDEILARALTLPPDDDSQMGADDMSSGIRGHREDSIASDTSSLDPSDSARGYRHASSSDIEAAMSERPSTMSYSSSMTSSAAYPPTPISYPAAAMAGTAPLRDRSESRLSATTTPPPSRRVTVSRWTRNIGLLLLAIGLVALGSAIVSHTYLPEWRDKRALESLVVDSPDHPNYAAWVNHASPSSAGRGEGDSPTYQRFYFFHLVNSKGFLQGKKPFYLEKGPYTFRQTKKKVDVNFSEKGTLVSYVTLVQNKYSPEQSGKDVALSDTVTMLNLAYATAVATFGSESNLLRYGSRRALMEIERAWESTFLPTLKERAVAATAVKTLALIDEALTKLNYQEDGTAIRWGGGCASAGMVQQCGFEKAAFLKAMIGKERKEDAELYHMCLDTGLGSEPGQVGRAMI Sbjct: 1 MASGHSEADEAWQKPEESRRQQDEILARALTLPPDDDSQMGADDMSSGIRGHREDSIASDTSSLDPSDSARGYRHASSSDIEAAMSERPSTMSYSSSMTSSAAYPPTPISYPAAAMAGTAPLRDRSESRLSATTTPPPSRRVTVSRWTRNIGLLLLAIGLVALGSAIVSHTYLPEWRDKRALESLVVDSPDHPNYAAWVNHASPSSAGRGEGDSPTYQRFYFFHLVNSKGFLQGKKPFYLEKGPYTFRQTKKKVDVNFSEKGTLVSYVTLVQNKYSPEQSGKDVALSDTVTMLNLAYATAVATFGSESNLLRYGSRRALMEIERAWESTFLPTLKERAVAATAVKTLALIDEALTKLNYQEDGTAIRWGGGCASAGMVQQCGFEKAAFLKAMIGKERKEDAELYHMCLDTGLGSEPGQVGRAMI 424
BLAST of EWM24842.1 vs. NCBI_GenBank
Match: gi|585104049|gb|EWM23168.1| (uncharacterized protein Naga_100043g43 [Nannochloropsis gaditana]) HSP 1 Score: 174.096 bits (440), Expect = 9.202e-44 Identity = 101/307 (32.90%), Postives = 161/307 (52.44%), Query Frame = 0 Query: 128 SRLSATTTPPPSRRVTVSRWTRNI--------GLLLLAIGLVALGSAIVSHTYLPEWRDKRALESLVVDSPDHPNYAAWVNHASPSSAGRGEGDSPTYQRFYFFHLVNSKGFLQGKKPFYLEKGPYTFRQTKKKVDVNFSEKGTLVSYVTLVQNKYS--PEQSGKDVALSDTVTMLNLAYATAVATFGSESNLLRYGSRRALMEIERAWESTFLPTLKERAVAATAVKTLALIDEALTKLNYQEDGTAIRWGGGCASAGMVQQCGFEKAAFLKAMIGKERKEDAELYHMCLDTGLGSEPGQVGRAMI 424 +R+S T PP RR V W + G L GL+ + A V +R + E++VVD+P+HP + AW A + +P + ++ +++ N + FL G+ P E GP++F+Q KK++V FS++G LVSY+T +Q++++ PE+ + +V LNL Y+ A+ T GSESNLL+ GS++ L E+ ++ FLP LKE AV + + + L + + TA RWGGGC S + CGF A + + K K D L +C++T L +E Q+ A + Sbjct: 227 ARVSMDTVPP--RRSLVRSWLQTAWASRQCRRGFGLFVAGLLLMALAGVVDIEGNAYRHAKIREAIVVDAPNHPEFKAWATGA--------QQKTPLFYTYHLYNITNPEEFLAGQPPQVHEVGPFSFQQRTKKINVTFSDEGRLVSYITQIQHEFTGDPEELDRQ-----SVYSLNLPYSVAIYTAGSESNLLKIGSQQGLAEVLFQMKTYFLPALKENAVVMAIQMAVDAMTQILNAMQAPSEATATRWGGGCTSNMFGKICGFSTVATFFSAVDKRNKMDLNLLQLCINTKL-TEAEQIPLATV 517
BLAST of EWM24842.1 vs. NCBI_GenBank
Match: gi|585100954|gb|EWM20971.1| (hypothetical protein Naga_102070g1 [Nannochloropsis gaditana]) HSP 1 Score: 81.6481 bits (200), Expect = 1.359e-14 Identity = 35/87 (40.23%), Postives = 52/87 (59.77%), Query Frame = 0 Query: 334 LKERAVAATAVKTLALIDEALTKLNYQEDGTAIRWGGGCASAGM-VQQCGFEKAAFLKAMIGKERKEDAELYHMCLDTGLGSEPGQV 419 +KE + A + ++ E L K+ Y EDG IRWGGGC G+ + CGF A+LKA++ E+++D L +CL+T L PG+V Sbjct: 1 MKEASAVFAATTAIKMMQENLAKIRYPEDGVTIRWGGGCVPVGLQINHCGFSSIAYLKAVLNAEQQQDIALIQLCLETYLDPMPGRV 87
BLAST of EWM24842.1 vs. NCBI_GenBank
Match: gi|585110788|gb|EWM28404.1| (cd36-like class b scavenger receptor [Nannochloropsis gaditana]) HSP 1 Score: 86.6557 bits (213), Expect = 1.624e-14 Identity = 60/185 (32.43%), Postives = 91/185 (49.19%), Query Frame = 0 Query: 140 RRVTVSRWTR--NIGLLLLAIGLVALGSAIVSHTYLPEWRDKRALESLVVDS-PDHPNYAAWVNHASPSSAGRGEGDSPTYQRFYFFHLVNSKGFLQGKKPFYLEKGPYTFRQTKKKVDVNFSEKGTLVSYVTLVQNKYSPEQS--GKDVALSDTVTMLNLAYATAVATFGSESNLLRYGSRRAL 319 RR W + +GL + IGLV L A + H PE ++ + LVV S W+ +S + PT+ +F++L N+ FL G P + GP+T+RQ +++ DV F+ G+ V + T + PE + G D S +T +N AYAT VA +ESN++R G R L Sbjct: 93 RRKAGGTWFKGYTLGLTWMGIGLVVLAVAGILHKAFPELYKRKLRDKLVVTSMAQAEETVGWLGDSSLHT--------PTHIGLHFYNLTNAADFLGGALPAFELVGPFTYRQFRRRTDVVFAPDGSYVDFTTNFKAVLQPELTFGGTD---SWNITSINTAYATGVARKLAESNMVRIGVPRIL 266
BLAST of EWM24842.1 vs. NCBI_GenBank
Match: gi|1192750486|ref|XP_021004437.1| (protein croquemort-like isoform X1 [Parasteatoda tepidariorum] >gi|1192750488|ref|XP_021004438.1| protein croquemort-like isoform X2 [Parasteatoda tepidariorum]) HSP 1 Score: 77.7962 bits (190), Expect = 6.892e-12 Identity = 49/150 (32.67%), Postives = 82/150 (54.67%), Query Frame = 0 Query: 153 LLLLAIGLVALGSAIVSHTYLPEWRDKRALESLVVDSPDHPNYAAWVNHASPSSAGRGEGDSPTYQRFYFFHLVNSKGFLQGK-KPFYLEKGPYTFRQTKKKVDVNFSEKGTLVSYVTLVQNKYSPEQSGKDVALSDTVTMLNLAYATAV 301 ++L+A+G++ ++S+ P + E+L++ SP+ Y W P P Y +FYFF++ N+K L+ K KPF E GPYTFR+T++KV++ + GT VSY + + + P + +L D +T +N+ ATAV Sbjct: 10 VILVAVGILMAVMGLLSYIMFPRILKWQVEENLIL-SPEAEPYEFW--RVIPV---------PIYSKFYFFNITNTKDILEHKAKPFVQELGPYTFRETREKVNITWHPNGT-VSYFQIKRWYFEPSMTSG--SLDDLITTVNVPLATAV 144
BLAST of EWM24842.1 vs. NCBI_GenBank
Match: gi|923130739|ref|XP_013758835.1| (lysosome membrane protein 2 [Thecamonas trahens ATCC 50062] >gi|906555025|gb|KNC48268.1| lysosome membrane protein 2 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 78.1814 bits (191), Expect = 6.944e-12 Identity = 55/176 (31.25%), Postives = 84/176 (47.73%), Query Frame = 0 Query: 149 RNIGLLLLAIGLVALGSAIVSHTYLPEWRDKRALESLVVDSPDHPNYAAWVNHASPSSAGRGEGDSPTYQRFYFFHLVNSKGFLQGKKPFYLEKGPYTFRQTKKKVDVNFSEKGTLVSYVTLVQNKYSPEQSGKDVALSDTVTMLNL--AYATAVATFGSESNLLRYGSRRALMEI 322 + +G+ GL+ + +A + +P K+ +++V+DSP+ Y WV S +G E Q + FF+L N+ L G P + GP+ +R+ K+D F + G VS+ + Q + PEQS D D V + N Y AV GSE NLL YG L+ I Sbjct: 9 KAVGITACVAGLLLIAAATTVYLLIPYLVQKKINDAVVIDSPNSSGYDNWV---SSYHSGNSE-----LQSYTFFNLTNAPDVLAGAAPVFEPVGPFVYRRNTVKLDPKFLDGGARVSFKEMSQYSFVPEQSIYDQL--DKVLLTNYFPFYQAAVNKAGSEKNLL-YGFLPTLLSI 173
BLAST of EWM24842.1 vs. NCBI_GenBank
Match: gi|156355441|ref|XP_001623676.1| (predicted protein [Nematostella vectensis] >gi|156210398|gb|EDO31576.1| predicted protein [Nematostella vectensis]) HSP 1 Score: 76.6406 bits (187), Expect = 1.652e-11 Identity = 52/174 (29.89%), Postives = 92/174 (52.87%), Query Frame = 0 Query: 149 RNIGLLLLAIGLVALGSAIVSHTYLPEWRDKRALE-SLVVDSPDHPNYAAWVNHASPS------SAGRGE-GDSPTYQRFYFFHLVNSKGFL-QGKKPFYLEKGPYTFRQTKKKVDVNFSEKGTLVSYVTLVQNKYSPE---QSGKDVALSDTVTMLNLAYATAVATFGSESNL 310 + G++L+ G+VA+ I+ ++ R K+ L+ + ++S DH Y +WV+ + + R + G S + YF+H+ N GFL +G+ P + E+GPY ++ T +K+DV+F + G V+Y Q + + Q+ SD +T+LNL Y AVA G + + Sbjct: 6 KRTGIILVIFGIVAVVVGILVGQFITR-RVKQGLDDQICINSKDHTGYDSWVSELLKAPDIWYHTIFRFQIGASESSASIYFWHIKNKNGFLHKGETPQFEERGPYVYKTTTEKIDVSFDDNGH-VTYKKYSQQTFDADATAQACPQCKESDQMTVLNLGYLGAVAQAGGDMGI 177
BLAST of EWM24842.1 vs. NCBI_GenBank
Match: gi|260791976|ref|XP_002591003.1| (hypothetical protein BRAFLDRAFT_119088 [Branchiostoma floridae] >gi|229276203|gb|EEN47014.1| hypothetical protein BRAFLDRAFT_119088 [Branchiostoma floridae]) HSP 1 Score: 70.8626 bits (172), Expect = 2.293e-10 Identity = 39/98 (39.80%), Postives = 54/98 (55.10%), Query Frame = 0 Query: 215 PTYQRFYFFHLVNSKGFLQGKKPFYLEKGPYTFRQTKKKVDVNFSEKGTLVSYVTLVQNKYSPEQSGKDVALSDTVTMLNLAYATAVATFGSESNLLR 312 P Y +FYFF L+N L G KP +LEKGPYT+ + + KV+V F T VSYV L + P S +DT T +N+A T +E +L++ Sbjct: 63 PIYIQFYFFDLLNKDEVLNGAKPAFLEKGPYTYSEVRHKVNVTFHGNDT-VSYVDLKSYSFVPRMSAG--TQNDTFTSINIAAMTLSEWIENERDLIK 157
BLAST of EWM24842.1 vs. NCBI_GenBank
Match: gi|675367991|gb|KFM60893.1| (Protein croquemort, partial [Stegodyphus mimosarum]) HSP 1 Score: 73.1738 bits (178), Expect = 2.564e-10 Identity = 49/150 (32.67%), Postives = 80/150 (53.33%), Query Frame = 0 Query: 153 LLLLAIGLVALGSAIVSHTYLPEWRDKRALESLVVDSPDHPNYAAWVNHASPSSAGRGEGDSPTYQRFYFFHLVNSKGFLQGK-KPFYLEKGPYTFRQTKKKVDVNFSEKGTLVSYVTLVQNKYSPEQSGKDVALSDTVTMLNLAYATAV 301 +LL +GL+ S + S+ P + E+L++ SP+ Y W P P Y RFYFF++ N+K +Q KP+ E GPYTFR+T++K+++ +++ GT VSY + + + P + +L D VT +N+ TAV Sbjct: 17 VLLATVGLLLALSGLCSYLLFPRILQWQVEENLIL-SPEAEPYEYW--KVIPV---------PIYARFYFFNVTNAKEVVQNNAKPYLQELGPYTFRETREKINITWNDNGT-VSYYQIKRWFFEPNLTTG--SLDDLVTTVNVPLVTAV 151
BLAST of EWM24842.1 vs. NCBI_GenBank
Match: gi|1005956277|ref|XP_015786542.1| (PREDICTED: lysosome membrane protein 2-like [Tetranychus urticae]) HSP 1 Score: 72.7886 bits (177), Expect = 3.221e-10 Identity = 47/157 (29.94%), Postives = 71/157 (45.22%), Query Frame = 0 Query: 156 LAIGLVALGSAIVSHTYLPEWRDKRALESLVVDSPDHPNYAAWVNHASPSSAGRGEGDSPTYQRFYFFHLVNSKGFLQGKKPFYLEKGPYTFRQTKKKVDVNFSEKGTLVSYVTLVQNKYSPEQSGKDVALSDTVTMLNLAYATAVATFGSESNLLR 312 L IGL S IV YLP D ++ P + + S + + D P Y RFY F+L N F+ G+K + E GPYTFRQ ++ V ++ TL Y T+ + P S + L DT+T++N T T ++ + + Sbjct: 12 LIIGL----SIIVFGIYLPILIDNFITTTIQQKFP--------LTNGSETLSAWTNPDIPIYTRFYLFNLTNVDDFISGEKAIFTEMGPYTFRQVRRNVIHTWNSDETLFDYETIRSYNFVPHLSAGN--LDDTLTLINFPVVTIAKTIAEKAPMFK 154 The following BLAST results are available for this feature:
BLAST of EWM24842.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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