EWM24847.1, cds5828 (CDS) Nannochloropsis gaditana

Overview
NameEWM24847.1
Unique Namecds5828
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:976236..976799 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24847.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100322g6.5908.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:976236..976799 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24847.1 vs. NCBI_GenBank
Match: gi|585106446|gb|EWM24846.1| (hypothetical protein Naga_100322g6 [Nannochloropsis gaditana] >gi|585106447|gb|EWM24847.1| hypothetical protein Naga_100322g6 [Nannochloropsis gaditana])

HSP 1 Score: 366.311 bits (939), Expect = 4.818e-128
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0 
Query:    1 MCRIHPSQEEEVENDKAEAEGEARHSPGTGGTSHWCPPRRLQSRSHPPMKPHQGCGESRGQDDGPAGRPERRAGVVGGAHGARACAAQPGIRRAAIQSEVGTDDGCVGGPVEEGSFGGRAVERCGCARDVADALETGQGKACGMWGLGRSAAGIDAAVAACGNDSLVLAAPGSNSVVADGVPVAPDD 187
            MCRIHPSQEEEVENDKAEAEGEARHSPGTGGTSHWCPPRRLQSRSHPPMKPHQGCGESRGQDDGPAGRPERRAGVVGGAHGARACAAQPGIRRAAIQSEVGTDDGCVGGPVEEGSFGGRAVERCGCARDVADALETGQGKACGMWGLGRSAAGIDAAVAACGNDSLVLAAPGSNSVVADGVPVAPDD
Sbjct:    1 MCRIHPSQEEEVENDKAEAEGEARHSPGTGGTSHWCPPRRLQSRSHPPMKPHQGCGESRGQDDGPAGRPERRAGVVGGAHGARACAAQPGIRRAAIQSEVGTDDGCVGGPVEEGSFGGRAVERCGCARDVADALETGQGKACGMWGLGRSAAGIDAAVAACGNDSLVLAAPGSNSVVADGVPVAPDD 187
The following BLAST results are available for this feature:
BLAST of EWM24847.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106446|gb|EWM24846.1|4.818e-128100.00hypothetical protein Naga_100322g6 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5843rna5843Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications