EWM24853.1, cds5820 (CDS) Nannochloropsis gaditana

Overview
NameEWM24853.1
Unique Namecds5820
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:960770..960786 -
Alignment locationCM002466.1:959716..960335 -
Alignment locationCM002466.1:959473..959591 -

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Properties
Property NameValue
Protein idEWM24853.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100882g1.6798.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:960770..960786 -
CM002466.1supercontigCM002466.1:959716..960335 -
CM002466.1supercontigCM002466.1:959473..959591 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24853.1 vs. NCBI_GenBank
Match: gi|585106457|gb|EWM24853.1| (hypothetical protein Naga_100882g1 [Nannochloropsis gaditana])

HSP 1 Score: 503.827 bits (1296), Expect = 2.791e-180
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0 
Query:    1 MPPTRSAPFLPHRKKLAMSLQPSGDNPPHLRSLECPEGGAGMETQAIFTACSKETGSTAHAISRQRHPAPFSPRLPGNAAQNFSILGLVPPSPMTTQASTASTCTTAEVSSSSSEGGDEDEDEEEEEEEEENKREGGRDGTAKLPQSSVLGRGRWKGLKRSATVQDAVESQQREAGQTFLPPLPVEAIGGTSKKRRGPFPSPGLTPELPASVCRKTGGRRRLSWRRQRRPGTSLSSRDSWNKARIQWHRTR 251
            MPPTRSAPFLPHRKKLAMSLQPSGDNPPHLRSLECPEGGAGMETQAIFTACSKETGSTAHAISRQRHPAPFSPRLPGNAAQNFSILGLVPPSPMTTQASTASTCTTAEVSSSSSEGGDEDEDEEEEEEEEENKREGGRDGTAKLPQSSVLGRGRWKGLKRSATVQDAVESQQREAGQTFLPPLPVEAIGGTSKKRRGPFPSPGLTPELPASVCRKTGGRRRLSWRRQRRPGTSLSSRDSWNKARIQWHRTR
Sbjct:    1 MPPTRSAPFLPHRKKLAMSLQPSGDNPPHLRSLECPEGGAGMETQAIFTACSKETGSTAHAISRQRHPAPFSPRLPGNAAQNFSILGLVPPSPMTTQASTASTCTTAEVSSSSSEGGDEDEDEEEEEEEEENKREGGRDGTAKLPQSSVLGRGRWKGLKRSATVQDAVESQQREAGQTFLPPLPVEAIGGTSKKRRGPFPSPGLTPELPASVCRKTGGRRRLSWRRQRRPGTSLSSRDSWNKARIQWHRTR 251
The following BLAST results are available for this feature:
BLAST of EWM24853.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106457|gb|EWM24853.1|2.791e-180100.00hypothetical protein Naga_100882g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5835rna5835Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications