EWM24862.1, cds5815 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24862.1 vs. NCBI_GenBank
Match: gi|585106472|gb|EWM24862.1| (hypothetical protein Naga_100381g5 [Nannochloropsis gaditana]) HSP 1 Score: 535.028 bits (1377), Expect = 0.000e+0 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0
Query: 1 MSEESMPLDTRFNEVEGGQDLYPDEKGVWNLVEEGEMKVQAAPMVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDKGTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIPSPHKMAEVGADD 259
MSEESMPLDTRFNEVEGGQDLYPDEKGVWNLVEEGEMKVQAAPMVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDKGTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIPSPHKMAEVGADD
Sbjct: 1 MSEESMPLDTRFNEVEGGQDLYPDEKGVWNLVEEGEMKVQAAPMVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDKGTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIPSPHKMAEVGADD 259
BLAST of EWM24862.1 vs. NCBI_GenBank
Match: gi|585106473|gb|EWM24863.1| (hypothetical protein Naga_100381g5 [Nannochloropsis gaditana]) HSP 1 Score: 444.506 bits (1142), Expect = 3.267e-157 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
Query: 44 MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDKGTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIPSPHKMAEVGADD 259
MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDKGTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIPSPHKMAEVGADD
Sbjct: 1 MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDKGTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIPSPHKMAEVGADD 216
BLAST of EWM24862.1 vs. NCBI_GenBank
Match: gi|553179576|ref|XP_005852722.1| (ribonuclease Z [Nannochloropsis gaditana CCMP526] >gi|422295812|gb|EKU23111.1| ribonuclease Z [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 442.58 bits (1137), Expect = 1.603e-156 Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0
Query: 44 MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDKGTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIPSPHKMAEVGADD 259
MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIA LAQDCDVLVHEATNAFLLPFDKGTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIPSPHKMAEVGADD
Sbjct: 1 MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAVLAQDCDVLVHEATNAFLLPFDKGTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIPSPHKMAEVGADD 216
BLAST of EWM24862.1 vs. NCBI_GenBank
Match: gi|1210529699|dbj|GAX11793.1| (ribonuclease Z [Fistulifera solaris]) HSP 1 Score: 254.218 bits (648), Expect = 4.216e-80 Identity = 132/256 (51.56%), Postives = 173/256 (67.58%), Query Frame = 0
Query: 1 MSEESMPLDTRFNEVEGGQDLYP--------DEKGVWNLVEEGEMKVQAAPMVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDKGT-YMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIP 247
MS E P F+EVEGG+++YP D VW + +EG++KV AAPM H +PCVG+VV E +PGRL+ EYV PIV+RN A L + G P K ++K L PG A PDGT++ E+ +EA +QGRK+VICGDT+D+ + LA + DV++HEATNA+L DK T + +V R A AHGHSTPQ+AG F+ V KRLI+ HFS RYKGD+S +SL+IM R+E A K S L +V AA DLM++PIP
Sbjct: 98 MSLEPSPF---FSEVEGGRNIYPIYNHPRSYDGAPVWEVEDEGDVKVFAAPMSHGIPCVGYVVEELSRPGRLKNEYVEPIVKRNIAALKKAGFRAPMKAMAVIKNLPPGGAFTFPDGTVVTHEDAVEAPRQGRKVVICGDTADSRALRGLALNADVIIHEATNAYLQGVDKDTSFREVTRDAIAHGHSTPQIAGAFSKAVNGKRLILNHFSARYKGDVSVDSLSIMMRIEMQAMKASGLNETQVAAAWDLMVLPIP 350
BLAST of EWM24862.1 vs. NCBI_GenBank
Match: gi|1210520429|dbj|GAX20860.1| (ribonuclease Z [Fistulifera solaris]) HSP 1 Score: 252.677 bits (644), Expect = 2.184e-77 Identity = 131/256 (51.17%), Postives = 170/256 (66.41%), Query Frame = 0
Query: 1 MSEESMPLDTRFNEVEGGQDLYP--------DEKGVWNLVEEGEMKVQAAPMVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDKGT-YMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIP 247
MS E P F+EVEGG+ +YP D VW + +EG++KV AAPM H +PCVG+VV E +PGRL+ EYV PIV+RN A L + G P K ++K L PG A PDGT++ E+ +EA +QGRK+VICGDT+D+ + LA + DV++HEATNA+L DK T + +V R A HGHSTPQ+AG F V KRLI+ HFS RYKGD+S +SL+IM R+E A K S L +V AA DLM++PIP
Sbjct: 275 MSLEPSPF---FSEVEGGRSIYPIYNHPRSYDGAPVWEVEDEGDVKVFAAPMSHGIPCVGYVVEELSRPGRLKNEYVEPIVKRNIAALKQAGFKAPMKAMAVIKNLPPGGAFTFPDGTVVTHEDAVEAPRQGRKVVICGDTADSRALRGLALNADVIIHEATNAYLQGVDKDTSFREVTRDAITHGHSTPQIAGAFCKAVNGKRLILNHFSARYKGDVSVDSLSIMMRIEMQAMKASGLNETQVAAAWDLMVLPIP 527
BLAST of EWM24862.1 vs. NCBI_GenBank
Match: gi|224013026|ref|XP_002295165.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220969127|gb|EED87469.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 248.825 bits (634), Expect = 9.370e-75 Identity = 124/245 (50.61%), Postives = 163/245 (66.53%), Query Frame = 0
Query: 12 FNEVEGGQDLYP--------DEKGVWNLVEEGEMKVQAAPMVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDK-GTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIP 247
F E+EGG+D+YP D VW + ++ ++ V AAPM H VPCVG+V+ E D+PGRL+ E V P++ERN AGL+E G+ P K+ ++K L G + PDGT+++ E+V+E ++GRK+VICGDT+D G+ LAQ DVLVHEATN FL DK G V R A+ HGHSTP MAG FA R+ AK+L++ HFS RYKGD S ES+ IM R+E A K S L V A D M++PIP
Sbjct: 410 FGEIEGGRDIYPRYDHPQCHDGAPVWEVEKDSDVSVYAAPMSHGVPCVGYVIEEHDRPGRLQPENVLPVIERNHAGLIEAGVRHPMKVMAMVKNLPVGGSYTFPDGTVVKQEDVVEPPRKGRKVVICGDTADCRGLEGLAQGADVLVHEATNTFLPGVDKDGDLRGVTRDAKIHGHSTPFMAGEFAKRIGAKKLVLNHFSARYKGDQSIESMTIMTRMERQAMKASGLPETSVACAWDYMILPIP 654
BLAST of EWM24862.1 vs. NCBI_GenBank
Match: gi|397647606|gb|EJK77775.1| (hypothetical protein THAOC_00370, partial [Thalassiosira oceanica]) HSP 1 Score: 248.44 bits (633), Expect = 3.049e-73 Identity = 121/252 (48.02%), Postives = 172/252 (68.25%), Query Frame = 0
Query: 5 SMPLDTR-FNEVEGGQDLYP--------DEKGVWNLVEEGEMKVQAAPMVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDK-GTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPI 246
S+P +R F E +GG+D+YP +W + E ++ V AAPM H+VPCVG+VVTE+DKPGRL+ E V P+++RN+ GL++ G+ +P K+ ++K+L G + + PDGT++ E+V+E ++GRKI ICGDT++ +A+LAQD DVL+HEATN FL DK G R A+ HGHSTP MAG FA R+ AK+LI+ HFS RYKGD S +S+ IM R+E A K ++L D V A+ D M++P+
Sbjct: 571 SLPQSSRDFGEQDGGRDIYPRYDHPKCSGGAPIWEVEVEDDVCVHAAPMSHSVPCVGYVVTEQDKPGRLKPENVLPVIDRNRQGLIDAGIRNPMKVMAMVKSLPVGGSYSFPDGTIINQEDVVEPPRRGRKIAICGDTANCRALASLAQDADVLIHEATNTFLPGVDKDGDLRGASRDAKIHGHSTPHMAGEFARRINAKKLILNHFSARYKGDQSIDSMTIMTRIEKQAMKAAQLPEDCVAASWDFMVLPL 822
BLAST of EWM24862.1 vs. NCBI_GenBank
Match: gi|1001612028|gb|KXS15794.1| (Metallo-hydrolase/oxidoreductase [Gonapodya prolifera JEL478]) HSP 1 Score: 204.912 bits (520), Expect = 2.299e-60 Identity = 112/236 (47.46%), Postives = 148/236 (62.71%), Query Frame = 0
Query: 18 GQDLYPDEKGVWNLVEEGEM--KVQAAPMVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDK--GTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIPSP 249
G ++ G W L+ + + V+AAPM HTVPCVG+ + E D PGRL+ E +RP++E + G++ P RLL ++ G+ V LPDGT+L AE +E K+GR +V+ GDTSD+S IA LA+ C VLVHEATNA L K T VE+ + HGHSTP++AGHFA V A+RLI+THFS RYKGD +PES+ +M + +A K D VL A DLM V I P
Sbjct: 164 GDNILARSDGTWMLLRDDALGVTVKAAPMCHTVPCVGYSLREHDGPGRLKVEELRPLIEAQADAIRASGVAQP---LRLLSEVKAGKKVTLPDGTVLEAERFVEEPKRGRHVVVLGDTSDSSQIAKLARGCTVLVHEATNACLEDDLKNGATPESVEQLTKEHGHSTPELAGHFAKDVDAQRLILTHFSNRYKGDEAPESMRVMDDIRALAVKA--FGKDDVLTARDLMTVAIQRP 394
BLAST of EWM24862.1 vs. NCBI_GenBank
Match: gi|219128782|ref|XP_002184584.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404034|gb|EEC43983.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 187.963 bits (476), Expect = 4.023e-55 Identity = 95/198 (47.98%), Postives = 130/198 (65.66%), Query Frame = 0
Query: 17 GGQDLYP--------DEKGVWNLVEEGEMKVQAAPMVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDKGTYM-DVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRY 205
GG+++YP D +W + +E ++KV AAPM H +PC+G+VV E +PGRLR E V PIV+RN L E G + P K +LK L PG A PDGT+++ E+ +E ++GRK+VI GDT+D + LAQ+ D+++HEATN +L DK T + +V R A HGHSTPQ+AG FA V AKRL++ HFS RY
Sbjct: 87 GGRNIYPQYDHPLCADGAPMWEIEDEEDVKVYAAPMSHGIPCLGYVVDELPRPGRLRNEVVEPIVKRNVQALREAGFTVPMKAMAVLKNLPPGNAFTFPDGTVVQQEDAVEPPREGRKVVIGGDTADCRALRNLAQNADLVIHEATNCYLQGVDKDTDVREVTRDAVMHGHSTPQIAGDFARSVNAKRLVLNHFSARY 284
BLAST of EWM24862.1 vs. NCBI_GenBank
Match: gi|857979929|emb|CEO94587.1| (hypothetical protein PBRA_000372 [Plasmodiophora brassicae]) HSP 1 Score: 184.111 bits (466), Expect = 1.237e-52 Identity = 101/233 (43.35%), Postives = 144/233 (61.80%), Query Frame = 0
Query: 18 GQDLYPDEKGVWNLVEEGEMKVQAAPMVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQ-GLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDKG--TYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIP 247
GQD+ E GVW + + V AAP+ H + VGFV+TE D PGR+ E + PI++ + GL + G+ P LL +L+ G++++LPDGT+LR E+ + + GR++ I GDT ++S IA LA D+L+HEATNAFL D G T VE +HGHSTPQMAG FA + A L++ HFS RYKGD +P+SLA+M + +A + +V+ A D M +P+P
Sbjct: 146 GQDIV-MESGVWRVCHSDGVSVTAAPLQHRIESVGFVLTEDDTPGRVMIEKIEPILKAHAPGLCQAYGVRTP---MALLPSLKSGQSIDLPDGTVLRPEDFLHPKRPGRRLAILGDTCESSAIAPLAMGADLLIHEATNAFLQS-DSGVTTAAVVEEQCVSHGHSTPQMAGAFATSISAGALVLNHFSSRYKGDDAPDSLAVMDEIRALA--AGAFPSGKVVCARDFMSIPVP 371 The following BLAST results are available for this feature:
BLAST of EWM24862.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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