EWM24863.1, cds5814 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24863.1 vs. NCBI_GenBank
Match: gi|585106473|gb|EWM24863.1| (hypothetical protein Naga_100381g5 [Nannochloropsis gaditana]) HSP 1 Score: 443.351 bits (1139), Expect = 1.798e-157 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0 Query: 1 MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDKGTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIPSPHKMAEVGADD 216 MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDKGTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIPSPHKMAEVGADD Sbjct: 1 MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDKGTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIPSPHKMAEVGADD 216
BLAST of EWM24863.1 vs. NCBI_GenBank
Match: gi|585106472|gb|EWM24862.1| (hypothetical protein Naga_100381g5 [Nannochloropsis gaditana]) HSP 1 Score: 444.506 bits (1142), Expect = 2.724e-157 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0 Query: 1 MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDKGTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIPSPHKMAEVGADD 216 MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDKGTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIPSPHKMAEVGADD Sbjct: 44 MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDKGTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIPSPHKMAEVGADD 259
BLAST of EWM24863.1 vs. NCBI_GenBank
Match: gi|553179576|ref|XP_005852722.1| (ribonuclease Z [Nannochloropsis gaditana CCMP526] >gi|422295812|gb|EKU23111.1| ribonuclease Z [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 441.425 bits (1134), Expect = 8.355e-157 Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0 Query: 1 MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDKGTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIPSPHKMAEVGADD 216 MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIA LAQDCDVLVHEATNAFLLPFDKGTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIPSPHKMAEVGADD Sbjct: 1 MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAVLAQDCDVLVHEATNAFLLPFDKGTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIPSPHKMAEVGADD 216
BLAST of EWM24863.1 vs. NCBI_GenBank
Match: gi|1210529699|dbj|GAX11793.1| (ribonuclease Z [Fistulifera solaris]) HSP 1 Score: 221.09 bits (562), Expect = 7.439e-68 Identity = 110/205 (53.66%), Postives = 143/205 (69.76%), Query Frame = 0 Query: 1 MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDKGT-YMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIP 204 M H +PCVG+VV E +PGRL+ EYV PIV+RN A L + G P K ++K L PG A PDGT++ E+ +EA +QGRK+VICGDT+D+ + LA + DV++HEATNA+L DK T + +V R A AHGHSTPQ+AG F+ V KRLI+ HFS RYKGD+S +SL+IM R+E A K S L +V AA DLM++PIP Sbjct: 146 MSHGIPCVGYVVEELSRPGRLKNEYVEPIVKRNIAALKKAGFRAPMKAMAVIKNLPPGGAFTFPDGTVVTHEDAVEAPRQGRKVVICGDTADSRALRGLALNADVIIHEATNAYLQGVDKDTSFREVTRDAIAHGHSTPQIAGAFSKAVNGKRLILNHFSARYKGDVSVDSLSIMMRIEMQAMKASGLNETQVAAAWDLMVLPIP 350
BLAST of EWM24863.1 vs. NCBI_GenBank
Match: gi|1210520429|dbj|GAX20860.1| (ribonuclease Z [Fistulifera solaris]) HSP 1 Score: 219.935 bits (559), Expect = 1.433e-65 Identity = 109/205 (53.17%), Postives = 141/205 (68.78%), Query Frame = 0 Query: 1 MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDKGT-YMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIP 204 M H +PCVG+VV E +PGRL+ EYV PIV+RN A L + G P K ++K L PG A PDGT++ E+ +EA +QGRK+VICGDT+D+ + LA + DV++HEATNA+L DK T + +V R A HGHSTPQ+AG F V KRLI+ HFS RYKGD+S +SL+IM R+E A K S L +V AA DLM++PIP Sbjct: 323 MSHGIPCVGYVVEELSRPGRLKNEYVEPIVKRNIAALKQAGFKAPMKAMAVIKNLPPGGAFTFPDGTVVTHEDAVEAPRQGRKVVICGDTADSRALRGLALNADVIIHEATNAYLQGVDKDTSFREVTRDAITHGHSTPQIAGAFCKAVNGKRLILNHFSARYKGDVSVDSLSIMMRIEMQAMKASGLNETQVAAAWDLMVLPIP 527
BLAST of EWM24863.1 vs. NCBI_GenBank
Match: gi|397647606|gb|EJK77775.1| (hypothetical protein THAOC_00370, partial [Thalassiosira oceanica]) HSP 1 Score: 225.328 bits (573), Expect = 2.062e-65 Identity = 105/204 (51.47%), Postives = 147/204 (72.06%), Query Frame = 0 Query: 1 MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDK-GTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPI 203 M H+VPCVG+VVTE+DKPGRL+ E V P+++RN+ GL++ G+ +P K+ ++K+L G + + PDGT++ E+V+E ++GRKI ICGDT++ +A+LAQD DVL+HEATN FL DK G R A+ HGHSTP MAG FA R+ AK+LI+ HFS RYKGD S +S+ IM R+E A K ++L D V A+ D M++P+ Sbjct: 619 MSHSVPCVGYVVTEQDKPGRLKPENVLPVIDRNRQGLIDAGIRNPMKVMAMVKSLPVGGSYSFPDGTIINQEDVVEPPRRGRKIAICGDTANCRALASLAQDADVLIHEATNTFLPGVDKDGDLRGASRDAKIHGHSTPHMAGEFARRINAKKLILNHFSARYKGDQSIDSMTIMTRIEKQAMKAAQLPEDCVAASWDFMVLPL 822
BLAST of EWM24863.1 vs. NCBI_GenBank
Match: gi|224013026|ref|XP_002295165.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220969127|gb|EED87469.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 221.861 bits (564), Expect = 4.293e-65 Identity = 109/205 (53.17%), Postives = 140/205 (68.29%), Query Frame = 0 Query: 1 MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDK-GTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIP 204 M H VPCVG+V+ E D+PGRL+ E V P++ERN AGL+E G+ P K+ ++K L G + PDGT+++ E+V+E ++GRK+VICGDT+D G+ LAQ DVLVHEATN FL DK G V R A+ HGHSTP MAG FA R+ AK+L++ HFS RYKGD S ES+ IM R+E A K S L V A D M++PIP Sbjct: 450 MSHGVPCVGYVIEEHDRPGRLQPENVLPVIERNHAGLIEAGVRHPMKVMAMVKNLPVGGSYTFPDGTVVKQEDVVEPPRKGRKVVICGDTADCRGLEGLAQGADVLVHEATNTFLPGVDKDGDLRGVTRDAKIHGHSTPFMAGEFAKRIGAKKLVLNHFSARYKGDQSIESMTIMTRMERQAMKASGLPETSVACAWDYMILPIP 654
BLAST of EWM24863.1 vs. NCBI_GenBank
Match: gi|1001612028|gb|KXS15794.1| (Metallo-hydrolase/oxidoreductase [Gonapodya prolifera JEL478]) HSP 1 Score: 191.815 bits (486), Expect = 5.037e-56 Identity = 103/208 (49.52%), Postives = 134/208 (64.42%), Query Frame = 0 Query: 1 MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLP--FDKGTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIPSP 206 M HTVPCVG+ + E D PGRL+ E +RP++E + G++ P RLL ++ G+ V LPDGT+L AE +E K+GR +V+ GDTSD+S IA LA+ C VLVHEATNA L + T VE+ + HGHSTP++AGHFA V A+RLI+THFS RYKGD +PES+ +M + +A K D VL A DLM V I P Sbjct: 192 MCHTVPCVGYSLREHDGPGRLKVEELRPLIEAQADAIRASGVAQP---LRLLSEVKAGKKVTLPDGTVLEAERFVEEPKRGRHVVVLGDTSDSSQIAKLARGCTVLVHEATNACLEDDLKNGATPESVEQLTKEHGHSTPELAGHFAKDVDAQRLILTHFSNRYKGDEAPESMRVMDDIRALAVKA--FGKDDVLTARDLMTVAIQRP 394
BLAST of EWM24863.1 vs. NCBI_GenBank
Match: gi|219128782|ref|XP_002184584.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404034|gb|EEC43983.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 168.318 bits (425), Expect = 4.765e-48 Identity = 83/163 (50.92%), Postives = 110/163 (67.48%), Query Frame = 0 Query: 1 MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDKGTYM-DVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRY 162 M H +PC+G+VV E +PGRLR E V PIV+RN L E G + P K +LK L PG A PDGT+++ E+ +E ++GRK+VI GDT+D + LAQ+ D+++HEATN +L DK T + +V R A HGHSTPQ+AG FA V AKRL++ HFS RY Sbjct: 122 MSHGIPCLGYVVDELPRPGRLRNEVVEPIVKRNVQALREAGFTVPMKAMAVLKNLPPGNAFTFPDGTVVQQEDAVEPPREGRKVVIGGDTADCRALRNLAQNADLVIHEATNCYLQGVDKDTDVREVTRDAVMHGHSTPQIAGDFARSVNAKRLVLNHFSARY 284
BLAST of EWM24863.1 vs. NCBI_GenBank
Match: gi|298710875|emb|CBJ26384.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 176.407 bits (446), Expect = 2.997e-47 Identity = 99/207 (47.83%), Postives = 128/207 (61.84%), Query Frame = 0 Query: 1 MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQ-GLSDPNKIFRLLKTLQPGEAVNLP--DGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLVHEATNAFLLPFDKG-TYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPI 203 M H VPCVG+ V E D+PGRL+ E + PI+E +K + G D + +K+ + GE + LP D TL A+ V + K GRK+VI GDT DA+ I LA DV+VHEATN L P D+G TY DVE A HGHSTP MA FA RV AK LI+ HFS RY+GD S S+A M R+E A + L +V+A+ DL+ +P+ Sbjct: 640 MKHGVPCVGYTVEEADRPGRLKVEELNPILEEHKQAICNTTGRKDVGWMLGWIKSTKRGETITLPGTDVTLDSADYVGASVK-GRKVVILGDTCDAASIVPLAMGADVVVHEATNTMLPPLDQGKTYADVEAEAIKHGHSTPMMAAAFAQRVGAKTLILNHFSARYRGDPSDASVAAMLRIERQAARAGGLERHQVVASWDLLEMPV 845 The following BLAST results are available for this feature:
BLAST of EWM24863.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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