EWM24867.1, cds5806 (CDS) Nannochloropsis gaditana

Overview
NameEWM24867.1
Unique Namecds5806
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:927033..927116 -
Alignment locationCM002466.1:926685..926829 -
Alignment locationCM002466.1:926343..926416 -

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Properties
Property NameValue
Start range926343
Start range.
Protein idEWM24867.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101105g1.1373.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:927033..927116 -
CM002466.1supercontigCM002466.1:926685..926829 -
CM002466.1supercontigCM002466.1:926343..926416 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM24867.1 vs. NCBI_GenBank
Match: gi|585106481|gb|EWM24867.1| (hypothetical protein Naga_101105g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 194.126 bits (492), Expect = 1.374e-62
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
Query:    1 MSLLQEEALKALKLVKADLDATKRVKQQLVAAVENKDAELATLQGQVDALKLEVQFLSSMGKEGGAALGAPSEEENALHQRLEALEKEKSEWILDRGSLHA 101
            MSLLQEEALKALKLVKADLDATKRVKQQLVAAVENKDAELATLQGQVDALKLEVQFLSSMGKEGGAALGAPSEEENALHQRLEALEKEKSEWILDRGSLHA
Sbjct:    1 MSLLQEEALKALKLVKADLDATKRVKQQLVAAVENKDAELATLQGQVDALKLEVQFLSSMGKEGGAALGAPSEEENALHQRLEALEKEKSEWILDRGSLHA 101          
The following BLAST results are available for this feature:
BLAST of EWM24867.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106481|gb|EWM24867.1|1.374e-62100.00hypothetical protein Naga_101105g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5821rna5821Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications