EWM24872.1, cds5801 (CDS) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	EWM24872.1
Unique Name	cds5801
Type	CDS
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	CM002466.1:913659..914109 +
Alignment location	CM002466.1:914180..914211 +

Link to JBrowse

Properties


Property Name	Value
Protein id	EWM24872.1
Product	a-pheromone processing metallopeptidase ste23
Orig transcript id	gnl\|cribi\|Naga_102945g1.9904.mrna
Gbkey	CDS

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CM002466.1	supercontig	CM002466.1:913659..914109 +
CM002466.1	supercontig	CM002466.1:914180..914211 +

Analyses

This CDS is derived from or has results from the following analyses


Analysis Name	Date Performed
GO annotation for N. gaditana B31	2020-04-08
BLAST analysis for N. gaditana B-31	2020-04-07
InterPro analysis for N. gaditana B-31	2020-04-06
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

The following terms have been associated with this CDS:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016787	hydrolase activity
GO:0005488	binding
GO:0003824	catalytic activity
GO:0046872	metal ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011249	Metalloenz_LuxS/M16
IPR011237	Pept_M16_dom
IPR007863	Peptidase_M16_C

Homology

[Close]

BLAST of EWM24872.1 vs. NCBI_GenBank
Match: gi|585106492|gb|EWM24872.1| (a-pheromone processing metallopeptidase ste23 [Nannochloropsis gaditana])

HSP 1 Score: 330.102 bits (845), Expect = 1.647e-114
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0

Query:    1 MTIVPVMDLRLLQLFWPLPPQRARYASAPTRYLSHLLGHEGAGSVLSYLKAKQWANELSAGGQFDQREWASLDISIDLTDEGVAHAREVVEVVYAYLRLLREAGPQRYVWEEMEQTAANSFRFLSKQQPMSYTSALSHRMHKYPPQHFISGAGTILLRFA 160
            MTIVPVMDLRLLQLFWPLPPQRARYASAPTRYLSHLLGHEGAGSVLSYLKAKQWANELSAGGQFDQREWASLDISIDLTDEGVAHAREVVEVVYAYLRLLREAGPQRYVWEEMEQTAANSFRFLSKQQPMSYTSALSHRMHKYPPQHFISGAGTILLRFA
Sbjct:    1 MTIVPVMDLRLLQLFWPLPPQRARYASAPTRYLSHLLGHEGAGSVLSYLKAKQWANELSAGGQFDQREWASLDISIDLTDEGVAHAREVVEVVYAYLRLLREAGPQRYVWEEMEQTAANSFRFLSKQQPMSYTSALSHRMHKYPPQHFISGAGTILLRFA 160

[Close]

BLAST of EWM24872.1 vs. NCBI_GenBank
Match: gi|953494589|emb|CEG44183.1| (insulin-degrading-like metalloprotease family [Plasmopara halstedii])

HSP 1 Score: 156.762 bits (395), Expect = 2.474e-41
Identity = 69/150 (46.00%), Postives = 104/150 (69.33%), Query Frame = 0

Query:    3 IVPVMDLRLLQLFWPLPPQRARYASAPTRYLSHLLGHEGAGSVLSYLKAKQWANELSAGGQFDQREWASLDISIDLTDEGVAHAREVVEVVYAYLRLLREAGP-QRYVWEEMEQTAANSFRFLSKQQPMSYTSALSHRMHKYPPQHFISG 151
            + PV DLR++ + WPLP     + + PT+ LSHL+GHEG GS+LS+LK ++W N LSAG   D  +WA   + +D+T+ G+ H  E+VEVVY YL++LRE  P + +++ E +  A  SFRF SK+ P++YTS L++ MH++PP+  +SG
Sbjct:  261 VAPVKDLRVIDISWPLPSLYQDFMTKPTKILSHLMGHEGPGSILSFLKEQKWGNGLSAGLFRDHEDWALFGVKVDVTNAGIEHVNEIVEVVYQYLQILREETPFEPWIFHETQNLALQSFRFKSKENPINYTSHLANVMHRFPPKLILSG 410

[Close]

BLAST of EWM24872.1 vs. NCBI_GenBank
Match: gi|1173957747|gb|OQS04220.1| (insulin-degrading-like enzyme, metalloprotease family M16A [Thraustotheca clavata])

HSP 1 Score: 156.377 bits (394), Expect = 3.822e-41
Identity = 69/150 (46.00%), Postives = 99/150 (66.00%), Query Frame = 0

Query:    3 IVPVMDLRLLQLFWPLPPQRARYASAPTRYLSHLLGHEGAGSVLSYLKAKQWANELSAGGQFDQREWASLDISIDLTDEGVAHAREVVEVVYAYLRLLREAGPQRYVWEEMEQTAANSFRFLSKQQPMSYTSALSHRMHKYPPQHFISGA 152
            + PV DLR +++ WPLPP R  +   PT  LSHLLGHEG GS+LSYLK  +W NELSAG   D  +W+   + ++ T+ G+ H  ++V  VY YL LLRE G + +V+EE +  A  +FRF SK+ P++Y S L+ +M  YP Q+ ++G+
Sbjct:  258 VTPVKDLRTIEIAWPLPPMRQDFLEKPTSILSHLLGHEGPGSLLSYLKKMKWVNELSAGLMKDHDDWSMFCVEVEATEAGITHVNDIVYAVYQYLYLLREKGIESWVFEEAKNIALMNFRFRSKETPINYASTLATKMQAYPVQYIVAGS 407

[Close]

BLAST of EWM24872.1 vs. NCBI_GenBank
Match: gi|301107880|ref|XP_002903022.1| (insulin-degrading-like enzyme, metalloprotease family M16A, putative [Phytophthora infestans T30-4] >gi|262098140|gb|EEY56192.1| insulin-degrading-like enzyme, metalloprotease family M16A, putative [Phytophthora infestans T30-4])

HSP 1 Score: 155.606 bits (392), Expect = 7.376e-41
Identity = 68/151 (45.03%), Postives = 104/151 (68.87%), Query Frame = 0

Query:    3 IVPVMDLRLLQLFWPLPPQRARYASAPTRYLSHLLGHEGAGSVLSYLKAKQWANELSAGGQFDQREWASLDISIDLTDEGVAHAREVVEVVYAYLRLLREAGP-QRYVWEEMEQTAANSFRFLSKQQPMSYTSALSHRMHKYPPQHFISGA 152
            + PV DLR++ + WPLP     + + PT+ LSHL+GHEG GS+LSYLKA++WAN LSAG   D  +W    + +D+TD G+ H  +VVE VY Y++ L++  P + +++ E +  A  +FRF SK+ P++YTS L++ MH+YPP++ +SG 
Sbjct:  261 VAPVKDLRVIDISWPLPSLHWDFLTKPTKILSHLMGHEGPGSILSYLKAQKWANALSAGLFRDNEDWGLFCVKVDVTDAGIEHVNDVVEAVYQYIQTLQQEAPFEPWIFHETQDLALQNFRFKSKESPINYTSHLANVMHRYPPKYILSGG 411

[Close]

BLAST of EWM24872.1 vs. NCBI_GenBank
Match: gi|813119691|ref|XP_012196348.1| (hypothetical protein SPRG_02382 [Saprolegnia parasitica CBS 223.65] >gi|641538861|gb|KDO32682.1| hypothetical protein SPRG_02382 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 155.221 bits (391), Expect = 8.632e-41
Identity = 68/152 (44.74%), Postives = 102/152 (67.11%), Query Frame = 0

Query:    1 MTIVPVMDLRLLQLFWPLPPQRARYASAPTRYLSHLLGHEGAGSVLSYLKAKQWANELSAGGQFDQREWASLDISIDLTDEGVAHAREVVEVVYAYLRLLREAGPQRYVWEEMEQTAANSFRFLSKQQPMSYTSALSHRMHKYPPQHFISGA 152
            + ++PV DLR +++ WPLPP R  Y   PT  LSHLLGHEG GS+LSYLK ++W NELSAG   D  +W+   + ++ TD G+AH  ++V  +Y YL LL  +  +R+V++E +  A  +FRF SK+ PM Y ++L+ +M  +P QH ++G+
Sbjct:  256 LRVMPVKDLRTIEVAWPLPPMRHAYLEKPTSILSHLLGHEGPGSLLSYLKGQKWVNELSAGLMKDHDDWSLFCVEVEATDAGIAHTDDIVFAIYQYLALLTSSPIERWVFDEAKNIALMNFRFRSKETPMHYATSLATKMQTFPVQHIVAGS 407

[Close]

BLAST of EWM24872.1 vs. NCBI_GenBank
Match: gi|570966536|gb|ETP29655.1| (hypothetical protein, variant [Phytophthora parasitica P10297])

HSP 1 Score: 153.295 bits (386), Expect = 3.297e-40
Identity = 72/158 (45.57%), Postives = 107/158 (67.72%), Query Frame = 0

Query:    3 IVPVMDLRLLQLFWPLPPQRARYASAPTRYLSHLLGHEGAGSVLSYLKAKQWANELSAGGQFDQREWASLDISIDLTDEGVAHAREVVEVVYAYLRLL-REAGPQRYVWEEMEQTAANSFRFLSKQQPMSYTSALSHRMHKYPPQHFISGAGTILLRF 159
            + PV DLR++ + WPLP     + + PT+ LSHL+GHEG GS+LSYLKA++WAN LSAG   D  +W    + +D+TD G+ H  +VVE VY Y++ L REA  + +++ E +  A  +FRF SK+ P++Y S L++ MH+YPP++ +SG G IL  +
Sbjct:  261 VAPVKDLRVIDVSWPLPSLHWDFLTKPTKILSHLMGHEGPGSILSYLKAQKWANGLSAGLFRDNEDWGLFCVKVDVTDTGIEHVNDVVEAVYQYIQTLQREAPFEPWIFHETQDLALQNFRFKSKESPINYASHLANVMHRYPPKYILSG-GYILYEY 417

[Close]

BLAST of EWM24872.1 vs. NCBI_GenBank
Match: gi|570312423|gb|ETO60371.1| (hypothetical protein, variant [Phytophthora parasitica P1976])

HSP 1 Score: 153.295 bits (386), Expect = 3.674e-40
Identity = 72/158 (45.57%), Postives = 107/158 (67.72%), Query Frame = 0

Query:    3 IVPVMDLRLLQLFWPLPPQRARYASAPTRYLSHLLGHEGAGSVLSYLKAKQWANELSAGGQFDQREWASLDISIDLTDEGVAHAREVVEVVYAYLRLL-REAGPQRYVWEEMEQTAANSFRFLSKQQPMSYTSALSHRMHKYPPQHFISGAGTILLRF 159
            + PV DLR++ + WPLP     + + PT+ LSHL+GHEG GS+LSYLKA++WAN LSAG   D  +W    + +D+TD G+ H  +VVE VY Y++ L REA  + +++ E +  A  +FRF SK+ P++Y S L++ MH+YPP++ +SG G IL  +
Sbjct:  261 VAPVKDLRVIDVSWPLPSLHWDFLTKPTKILSHLMGHEGPGSILSYLKAQKWANGLSAGLFRDNEDWGLFCVKVDVTDTGIEHVNDVVEAVYQYIQTLQREAPFEPWIFHETQDLALQNFRFKSKESPINYASHLANVMHRYPPKYILSG-GYILYEY 417

[Close]

BLAST of EWM24872.1 vs. NCBI_GenBank
Match: gi|567946227|gb|ETK72038.1| (hypothetical protein, variant [Phytophthora parasitica] >gi|567974892|gb|ETL25467.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568034267|gb|ETM31941.1| hypothetical protein, variant [Phytophthora parasitica] >gi|570936207|gb|ETP01464.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1])

HSP 1 Score: 153.295 bits (386), Expect = 3.674e-40
Identity = 72/158 (45.57%), Postives = 107/158 (67.72%), Query Frame = 0

Query:    3 IVPVMDLRLLQLFWPLPPQRARYASAPTRYLSHLLGHEGAGSVLSYLKAKQWANELSAGGQFDQREWASLDISIDLTDEGVAHAREVVEVVYAYLRLL-REAGPQRYVWEEMEQTAANSFRFLSKQQPMSYTSALSHRMHKYPPQHFISGAGTILLRF 159
            + PV DLR++ + WPLP     + + PT+ LSHL+GHEG GS+LSYLKA++WAN LSAG   D  +W    + +D+TD G+ H  +VVE VY Y++ L REA  + +++ E +  A  +FRF SK+ P++Y S L++ MH+YPP++ +SG G IL  +
Sbjct:  261 VAPVKDLRVIDVSWPLPSLHWDFLTKPTKILSHLMGHEGPGSILSYLKAQKWANGLSAGLFRDNEDWGLFCVKVDVTDTGIEHVNDVVEAVYQYIQTLQREAPFEPWIFHETQDLALQNFRFKSKESPINYASHLANVMHRYPPKYILSG-GYILYEY 417

[Close]

BLAST of EWM24872.1 vs. NCBI_GenBank
Match: gi|675178809|ref|XP_008898289.1| (hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|568101191|gb|ETN15877.1| hypothetical protein, variant [Phytophthora parasitica INRA-310])

HSP 1 Score: 153.295 bits (386), Expect = 3.711e-40
Identity = 72/158 (45.57%), Postives = 107/158 (67.72%), Query Frame = 0

Query:    3 IVPVMDLRLLQLFWPLPPQRARYASAPTRYLSHLLGHEGAGSVLSYLKAKQWANELSAGGQFDQREWASLDISIDLTDEGVAHAREVVEVVYAYLRLL-REAGPQRYVWEEMEQTAANSFRFLSKQQPMSYTSALSHRMHKYPPQHFISGAGTILLRF 159
            + PV DLR++ + WPLP     + + PT+ LSHL+GHEG GS+LSYLKA++WAN LSAG   D  +W    + +D+TD G+ H  +VVE VY Y++ L REA  + +++ E +  A  +FRF SK+ P++Y S L++ MH+YPP++ +SG G IL  +
Sbjct:  261 VAPVKDLRVIDVSWPLPSLHWDFLTKPTKILSHLMGHEGPGSILSYLKAQKWANGLSAGLFRDNEDWGLFCVKVDVTDTGIEHVNDVVEAVYQYIQTLQREAPFEPWIFHETQDLALQNFRFKSKESPINYASHLANVMHRYPPKYILSG-GYILYEY 417

[Close]

BLAST of EWM24872.1 vs. NCBI_GenBank
Match: gi|970636155|gb|KUF80876.1| (Insulin-degrading enzyme [Phytophthora nicotianae])

HSP 1 Score: 153.68 bits (387), Expect = 3.720e-40
Identity = 72/158 (45.57%), Postives = 107/158 (67.72%), Query Frame = 0

Query:    3 IVPVMDLRLLQLFWPLPPQRARYASAPTRYLSHLLGHEGAGSVLSYLKAKQWANELSAGGQFDQREWASLDISIDLTDEGVAHAREVVEVVYAYLRLL-REAGPQRYVWEEMEQTAANSFRFLSKQQPMSYTSALSHRMHKYPPQHFISGAGTILLRF 159
            + PV DLR++ + WPLP     + + PT+ LSHL+GHEG GS+LSYLKA++WAN LSAG   D  +W    + +D+TD G+ H  +VVE VY Y++ L REA  + +++ E +  A  +FRF SK+ P++Y S L++ MH+YPP++ +SG G IL  +
Sbjct:  261 VAPVKDLRVIDVSWPLPSLHWDFLTKPTKILSHLMGHEGPGSILSYLKAQKWANGLSAGLFRDNEDWGLFCVKVDVTDTGIEHVNDVVEAVYQYIQTLQREAPFEPWIFHETQDLALQNFRFKSKESPINYASHLANVMHRYPPKYILSG-GYILYEY 417

The following BLAST results are available for this feature:

BLAST of EWM24872.1 vs. NCBI_GenBank

BLAST of EWM24872.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10


Match Name	E-value	Identity	Description
gi\|585106492\|gb\|EWM24872.1\|	1.647e-114	100.00	a-pheromone processing metallopeptidase ste23 [Nan...	[more]
gi\|953494589\|emb\|CEG44183.1\|	2.474e-41	46.00	insulin-degrading-like metalloprotease family [Pla...	[more]
gi\|1173957747\|gb\|OQS04220.1\|	3.822e-41	46.00	insulin-degrading-like enzyme, metalloprotease fam...	[more]
gi\|301107880\|ref\|XP_002903022.1\|	7.376e-41	45.03	insulin-degrading-like enzyme, metalloprotease fam...	[more]
gi\|813119691\|ref\|XP_012196348.1\|	8.632e-41	44.74	hypothetical protein SPRG_02382 [Saprolegnia paras...	[more]
gi\|570966536\|gb\|ETP29655.1\|	3.297e-40	45.57	hypothetical protein, variant [Phytophthora parasi...	[more]
gi\|570312423\|gb\|ETO60371.1\|	3.674e-40	45.57	hypothetical protein, variant [Phytophthora parasi...	[more]
gi\|567946227\|gb\|ETK72038.1\|	3.674e-40	45.57	hypothetical protein, variant [Phytophthora parasi...	[more]
gi\|675178809\|ref\|XP_008898289.1\|	3.711e-40	45.57	hypothetical protein, variant [Phytophthora parasi...	[more]
gi\|970636155\|gb\|KUF80876.1\|	3.720e-40	45.57	Insulin-degrading enzyme [Phytophthora nicotianae]	[more]

Relationships

This CDS is a part of the following mRNA feature(s):


Feature Name	Unique Name	Species	Type
rna5816	rna5816	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

Synonyms

Publications