EWM24876.1, cds5798 (CDS) Nannochloropsis gaditana

Overview
NameEWM24876.1
Unique Namecds5798
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:906070..906414 +
Alignment locationCM002466.1:907774..908988 +
Alignment locationCM002466.1:909094..909261 +

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Properties
Property NameValue
Protein idEWM24876.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100432g3.5739.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:906070..906414 +
CM002466.1supercontigCM002466.1:907774..908988 +
CM002466.1supercontigCM002466.1:909094..909261 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24876.1 vs. NCBI_GenBank
Match: gi|585106498|gb|EWM24876.1| (hypothetical protein Naga_100432g3 [Nannochloropsis gaditana])

HSP 1 Score: 1135.94 bits (2937), Expect = 0.000e+0
Identity = 575/575 (100.00%), Postives = 575/575 (100.00%), Query Frame = 0 
Query:    1 MPSTATHSRPRFDKKVATRTTEATSTSLSTEGMAVTVPQAEAAAPPTASDMEIVSASETGSKPSRGAATTAGTPIGDTISVTTARAQSTDPGVDSDAIMSGQNVLGPPPRMATDLGLAEAARTQDDGRRPRQEHPPDVNATKKARKRTAILARQLEEARAERMAEVERLHAYYRGRTFHVPAGREGGREGGREGGEYEVLMVYSDVALADGPHALVKHKASGNVCCRPPVSVHRYLAHFFPRPPLPLRPSPPARSPALAAPHPPRLPRTVATKPAKNRTTAVVSVDHPNQPRPFSFPPLNAGDLLLPERPLATSKQVRKPSVTQADYALPPRPGGSRVGYAGDTSKDAAAVAWPANGAAQKGKGAPASVPERREAEHAFINPSLSSSRMAPALQPRRTSTHTALPSAAVLEPISQSFLRKLPGPDPPLSPPGRSPALTPPLPPSLPPPLAPSPSPSPSTPLGPLYQTVSSFLSAPSPQPTPLVLDPCANLDIGENSRDRSERCPKGRDDNCVSSSLLGEKRRRGMGERRERRRKGDRRRGALQHPAPRTQVLILLSSLGRSSVNIEADGAEKVRH 575
            MPSTATHSRPRFDKKVATRTTEATSTSLSTEGMAVTVPQAEAAAPPTASDMEIVSASETGSKPSRGAATTAGTPIGDTISVTTARAQSTDPGVDSDAIMSGQNVLGPPPRMATDLGLAEAARTQDDGRRPRQEHPPDVNATKKARKRTAILARQLEEARAERMAEVERLHAYYRGRTFHVPAGREGGREGGREGGEYEVLMVYSDVALADGPHALVKHKASGNVCCRPPVSVHRYLAHFFPRPPLPLRPSPPARSPALAAPHPPRLPRTVATKPAKNRTTAVVSVDHPNQPRPFSFPPLNAGDLLLPERPLATSKQVRKPSVTQADYALPPRPGGSRVGYAGDTSKDAAAVAWPANGAAQKGKGAPASVPERREAEHAFINPSLSSSRMAPALQPRRTSTHTALPSAAVLEPISQSFLRKLPGPDPPLSPPGRSPALTPPLPPSLPPPLAPSPSPSPSTPLGPLYQTVSSFLSAPSPQPTPLVLDPCANLDIGENSRDRSERCPKGRDDNCVSSSLLGEKRRRGMGERRERRRKGDRRRGALQHPAPRTQVLILLSSLGRSSVNIEADGAEKVRH
Sbjct:    1 MPSTATHSRPRFDKKVATRTTEATSTSLSTEGMAVTVPQAEAAAPPTASDMEIVSASETGSKPSRGAATTAGTPIGDTISVTTARAQSTDPGVDSDAIMSGQNVLGPPPRMATDLGLAEAARTQDDGRRPRQEHPPDVNATKKARKRTAILARQLEEARAERMAEVERLHAYYRGRTFHVPAGREGGREGGREGGEYEVLMVYSDVALADGPHALVKHKASGNVCCRPPVSVHRYLAHFFPRPPLPLRPSPPARSPALAAPHPPRLPRTVATKPAKNRTTAVVSVDHPNQPRPFSFPPLNAGDLLLPERPLATSKQVRKPSVTQADYALPPRPGGSRVGYAGDTSKDAAAVAWPANGAAQKGKGAPASVPERREAEHAFINPSLSSSRMAPALQPRRTSTHTALPSAAVLEPISQSFLRKLPGPDPPLSPPGRSPALTPPLPPSLPPPLAPSPSPSPSTPLGPLYQTVSSFLSAPSPQPTPLVLDPCANLDIGENSRDRSERCPKGRDDNCVSSSLLGEKRRRGMGERRERRRKGDRRRGALQHPAPRTQVLILLSSLGRSSVNIEADGAEKVRH 575
The following BLAST results are available for this feature:
BLAST of EWM24876.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106498|gb|EWM24876.1|0.000e+0100.00hypothetical protein Naga_100432g3 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5813rna5813Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications