EWM24887.1, cds5776 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24887.1 vs. NCBI_GenBank
Match: gi|585106514|gb|EWM24887.1| (uracil phosphoribosyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 559.296 bits (1440), Expect = 0.000e+0 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
Query: 1 MTRASRSIVFPKDTDKIISYQSGIAFPKLPVRPVPMETMLEPTSRNPDDNVIVPHCHSFPYLYTKIRDCKTSNKDFALYASRILRILAEEAVGMVPSSPCSIQTPTNTTYAGMRALDDENSLCVVSILRAGDALMEAVRSVVPQAAVAKILIQRDESSEEKLPKLFYSKIPSDVNSRFCILCDPMLATGGSALCALSILIQEGQVPPDNIIFVCVVAAPEGIRAVHTRHPEVKIVTGAIDTGLNEDKYIVPGLGDFGDRWYNTTGGEKSEA 271
MTRASRSIVFPKDTDKIISYQSGIAFPKLPVRPVPMETMLEPTSRNPDDNVIVPHCHSFPYLYTKIRDCKTSNKDFALYASRILRILAEEAVGMVPSSPCSIQTPTNTTYAGMRALDDENSLCVVSILRAGDALMEAVRSVVPQAAVAKILIQRDESSEEKLPKLFYSKIPSDVNSRFCILCDPMLATGGSALCALSILIQEGQVPPDNIIFVCVVAAPEGIRAVHTRHPEVKIVTGAIDTGLNEDKYIVPGLGDFGDRWYNTTGGEKSEA
Sbjct: 1 MTRASRSIVFPKDTDKIISYQSGIAFPKLPVRPVPMETMLEPTSRNPDDNVIVPHCHSFPYLYTKIRDCKTSNKDFALYASRILRILAEEAVGMVPSSPCSIQTPTNTTYAGMRALDDENSLCVVSILRAGDALMEAVRSVVPQAAVAKILIQRDESSEEKLPKLFYSKIPSDVNSRFCILCDPMLATGGSALCALSILIQEGQVPPDNIIFVCVVAAPEGIRAVHTRHPEVKIVTGAIDTGLNEDKYIVPGLGDFGDRWYNTTGGEKSEA 271
BLAST of EWM24887.1 vs. NCBI_GenBank
Match: gi|751731195|gb|KIM79506.1| (hypothetical protein PILCRDRAFT_823421 [Piloderma croceum F 1598]) HSP 1 Score: 217.624 bits (553), Expect = 2.657e-67 Identity = 111/231 (48.05%), Postives = 150/231 (64.94%), Query Frame = 0
Query: 36 METMLEPTSRN-----PDDNVIVPHCHSFPYLYTKIRDCKTSNKDFALYASRILRILAEEAVGMVPSSPCSIQTPTNTTYAGMRALDDENSLCVVSILRAGDALMEAVRSVVPQAAVAKILIQRDESSEEKLPKLFYSKIPSDVNSRFCILCDPMLATGGSALCALSILIQEGQVPPDNIIFVCVVAAPEGIRAVHTRHPEVKIVTGAIDTGLNEDKYIVPGLGDFGDRWY 261
M T L PTS+ P +P LYT IRD TS DF Y+ RI+R+L EE + +P P ++QTPT TY G+ E +C VSILRAG+A+ +R V + KILIQRDE E LPKLFYSK P D+ SR+ +L DPMLATGGSA+ A+ +L++ G VP + IIF+ +++APEG++ +R+P+++++TG ID GLNE YI+PGLGDFG+R Y
Sbjct: 1 MATTLSPTSQVSPASLPPSVFTLPQTAQLEALYTIIRDKDTSRGDFLFYSDRIIRLLVEEGLNHLPVLPKTVQTPTGATYEGV---GFEGKICGVSILRAGEAMEAGLREVCRSVRIGKILIQRDE--ETALPKLFYSKFPQDIASRYVLLLDPMLATGGSAMKAVEVLMEHG-VPEERIIFINLISAPEGLKTFCSRYPQLRVITGWIDKGLNEKAYIIPGLGDFGERRY 225
BLAST of EWM24887.1 vs. NCBI_GenBank
Match: gi|1021816266|gb|KZP05338.1| (PRTase-like protein [Fibularhizoctonia sp. CBS 109695]) HSP 1 Score: 216.853 bits (551), Expect = 7.853e-67 Identity = 112/231 (48.48%), Postives = 149/231 (64.50%), Query Frame = 0
Query: 36 METMLEPTSRN-----PDDNVIVPHCHSFPYLYTKIRDCKTSNKDFALYASRILRILAEEAVGMVPSSPCSIQTPTNTTYAGMRALDDENSLCVVSILRAGDALMEAVRSVVPQAAVAKILIQRDESSEEKLPKLFYSKIPSDVNSRFCILCDPMLATGGSALCALSILIQEGQVPPDNIIFVCVVAAPEGIRAVHTRHPEVKIVTGAIDTGLNEDKYIVPGLGDFGDRWY 261
M + + PTS+N P +P LYT IRD TS DF Y+ RI+R+L EEA+ +P S+QTPT TY G L E +C VSILRAG+A+ +R V + KILIQRDE E LPKLFYSK P D+ SR+ +L DPMLATGGSA+ A+ +L++ G VP D IIFV ++++PEG++ ++P ++++TG ID GLNE YI+PGLGDFG+R Y
Sbjct: 18 MASTIAPTSQNSPAGLPPSVFTLPQTAQLEALYTIIRDKDTSRGDFLFYSDRIIRLLVEEALNHLPVVAKSVQTPTGATYDG---LGFEGKICGVSILRAGEAMEAGLREVCRSVRIGKILIQRDE--ETALPKLFYSKFPQDIASRYVLLLDPMLATGGSAMKAVEVLVEHG-VPEDRIIFVNLISSPEGLKTFCAKYPTLRVITGWIDKGLNEQAYIIPGLGDFGERRY 242
BLAST of EWM24887.1 vs. NCBI_GenBank
Match: gi|597915311|ref|XP_007312000.1| (hypothetical protein SERLADRAFT_375218 [Serpula lacrymans var. lacrymans S7.9] >gi|336375837|gb|EGO04172.1| hypothetical protein SERLA73DRAFT_128291 [Serpula lacrymans var. lacrymans S7.3] >gi|336388973|gb|EGO30116.1| hypothetical protein SERLADRAFT_375218 [Serpula lacrymans var. lacrymans S7.9]) HSP 1 Score: 214.927 bits (546), Expect = 2.940e-66 Identity = 110/231 (47.62%), Postives = 149/231 (64.50%), Query Frame = 0
Query: 36 METMLEPTSRN-----PDDNVIVPHCHSFPYLYTKIRDCKTSNKDFALYASRILRILAEEAVGMVPSSPCSIQTPTNTTYAGMRALDDENSLCVVSILRAGDALMEAVRSVVPQAAVAKILIQRDESSEEKLPKLFYSKIPSDVNSRFCILCDPMLATGGSALCALSILIQEGQVPPDNIIFVCVVAAPEGIRAVHTRHPEVKIVTGAIDTGLNEDKYIVPGLGDFGDRWY 261
M T PTS+ P +P LYT IRD TS DF Y+ RI+R+L EE + +P P ++QTPT TY G+ E +C VSILRAG+A+ +R V + KILIQRDE E LPKLFYSK+P D+ SR+ +L DPMLATGGSA+ A+ ++I+ G VP D IIF+ +++APEG++ +++P ++++TG ID GLNE YI+PGLGDFG+R Y
Sbjct: 1 MATSAAPTSQTSPASLPPSVFTLPQTAQLEALYTIIRDKDTSRGDFLFYSDRIIRLLVEEGLNHLPVIPKTVQTPTGATYEGV---GFEGKICGVSILRAGEAMEAGLREVCRSVRIGKILIQRDE--ETTLPKLFYSKLPEDIASRYVLLLDPMLATGGSAMKAVEVIIEHG-VPEDRIIFINLISAPEGLKTFCSKYPALRVITGWIDKGLNEKAYIIPGLGDFGERRY 225
BLAST of EWM24887.1 vs. NCBI_GenBank
Match: gi|1072237191|gb|OEU21918.1| (uracil phosphoribosyltransferase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 214.542 bits (545), Expect = 4.196e-66 Identity = 104/202 (51.49%), Postives = 145/202 (71.78%), Query Frame = 0
Query: 62 LYTKIRDCKTSNKDFALYASRILRILAEEAVGMVPSSPCSIQTPTNTTYAGMRALDDENSLCVVSILRAGDALMEAVRSVVPQAAVAKILIQRDESSEEKLPKLFYSKIPSDVNSRFCILCDPMLATGGSALCALSILIQEGQVPPDNIIFVCVVAAPEGIRAVHTRHPEVKIVTGAIDTGLNEDKYIVPGLGDFGDRWYNT 263
L+TK+RD TS DF Y+ R +RILAE+A+ PS+ I TP + + G+R D +C VSI+R+GDAL+E VR V P V KILIQRDES EK KLFYSK+P D+ +++ +LCDPMLATGGSA+ A+ +L+++ V P I+F ++ APEG++ + +PE+KIVT AID LN++K+IVPGLGD+GDR++N+
Sbjct: 31 LFTKMRDTSTSPADFVQYSKRSMRILAEDALAEFPSTEVKITTPCGS-FDGVRG-PDPTDICAVSIIRSGDALLEVVREVEPAVRVGKILIQRDESIPEKTAKLFYSKLPPDIANQYVLLCDPMLATGGSAMKAIEVLVEQYNVKPSRILFANMICAPEGLKLLGDAYPEIKIVTAAIDDCLNDEKFIVPGLGDYGDRFFNS 230
BLAST of EWM24887.1 vs. NCBI_GenBank
Match: gi|1024080691|gb|KZV73599.1| (PRTase-like protein [Peniophora sp. CONT]) HSP 1 Score: 213.386 bits (542), Expect = 1.017e-65 Identity = 99/209 (47.37%), Postives = 145/209 (69.38%), Query Frame = 0
Query: 53 VPHCHSFPYLYTKIRDCKTSNKDFALYASRILRILAEEAVGMVPSSPCSIQTPTNTTYAGMRALDDENSLCVVSILRAGDALMEAVRSVVPQAAVAKILIQRDESSEEKLPKLFYSKIPSDVNSRFCILCDPMLATGGSALCALSILIQEGQVPPDNIIFVCVVAAPEGIRAVHTRHPEVKIVTGAIDTGLNEDKYIVPGLGDFGDRWY 261
+P H LYT IRD T+ DF Y+ RI+R+L EE + +P P ++ TPT TY G+ E +C VSILRAG+A+ + +R V + KILIQRDE + + PKLFY+K+P D+ +R+ +L DPMLATGGSA+ A+ ++++ G VP D IIF+ ++++PEG++A + R+P+++++TG ID GLNE YI+PGLGDFG+R Y
Sbjct: 21 LPRTHQLAALYTIIRDKDTTRGDFIFYSDRIIRLLVEEGLNHLPVLPKTVHTPTGVTYEGV---GFEGKICGVSILRAGEAMEQGLREVCRSVRIGKILIQRDEETAQ--PKLFYAKLPQDIANRYVLLLDPMLATGGSAMKAVEVIMEHG-VPEDRIIFINLISSPEGLQAFYKRYPKLRVITGWIDEGLNEKAYIIPGLGDFGERRY 223
BLAST of EWM24887.1 vs. NCBI_GenBank
Match: gi|527294133|gb|EPS95000.1| (hypothetical protein FOMPIDRAFT_1033089 [Fomitopsis pinicola FP-58527 SS1]) HSP 1 Score: 213.001 bits (541), Expect = 1.280e-65 Identity = 107/227 (47.14%), Postives = 149/227 (65.64%), Query Frame = 0
Query: 40 LEPTSRN-----PDDNVIVPHCHSFPYLYTKIRDCKTSNKDFALYASRILRILAEEAVGMVPSSPCSIQTPTNTTYAGMRALDDENSLCVVSILRAGDALMEAVRSVVPQAAVAKILIQRDESSEEKLPKLFYSKIPSDVNSRFCILCDPMLATGGSALCALSILIQEGQVPPDNIIFVCVVAAPEGIRAVHTRHPEVKIVTGAIDTGLNEDKYIVPGLGDFGDRWY 261
+ PTS+ P +PH LYT IRD TS DF Y+ RI+R+L EE + +P P +++TPT TY G+ E +C VSILRAG+A+ +R V + KILIQRDE E LPKLFY+K+P D+ R+ +L DPMLATGGSA+ A+ +L++ G VP D IIF+ ++++PEG+++ T++P ++++TG ID GLNE YIVPGLGDFG+R Y
Sbjct: 1 MSPTSQTTPASVPPSVFTLPHTAQLEALYTIIRDKTTSRGDFLFYSDRIIRLLVEEGLNHLPVVPKTVETPTGATYEGV---GFEGHICGVSILRAGEAMEAGLREVCRSVRIGKILIQRDE--ETALPKLFYAKLPQDIAHRYVLLLDPMLATGGSAMKAVEVLMEHG-VPEDRIIFINLISSPEGLKSFCTKYPALRVITGWIDEGLNEKAYIVPGLGDFGERRY 221
BLAST of EWM24887.1 vs. NCBI_GenBank
Match: gi|528243403|gb|EPY31626.1| (uracil phosphoribosyltransferase [Strigomonas culicis] >gi|528249872|gb|EPY34175.1| uracil phosphoribosyltransferase [Strigomonas culicis]) HSP 1 Score: 213.772 bits (543), Expect = 1.515e-65 Identity = 102/214 (47.66%), Postives = 145/214 (67.76%), Query Frame = 0
Query: 52 IVPHCHSFPYLYTKIRDCKTSNKDFALYASRILRILAEEAVGMVPSSPCSIQTPTNTTYAGMRALDDENSLCVVSILRAGDALMEAVRSVVPQAAVAKILIQRDESSEEKLP--KLFYSKIPSDVNSRFCILCDPMLATGGSALCALSILIQEGQVPPDNIIFVCVVAAPEGIRAVHTRHPEVKIVTGAIDTGLNEDKYIVPGLGDFGDRWYNT 263
++P +L+T IR+ +T DF Y+ RI+R++ E A+ ++P PC+I+TPT Y G+R D + VSILRAG+++ +R + + KIL+QRDE SE+K P + YSK+P DV+SR +L DPM+ATGGSA+ A IL Q+ VP +NIIF+ +VAAPEGIR TR P V+ +T AID G+N+ +YI+PGLGDFGDR++ T
Sbjct: 36 LLPQTPQLHFLFTVIRNVETQRTDFVFYSERIMRLILEAALCLIPVQPCNIKTPTGAVYQGVRP--DAKGIIGVSILRAGESMERVLREMCRGVRIGKILVQRDEKSEDKSPDERYNYSKMPKDVSSRHVLLMDPMIATGGSAIKATEILTQQYAVPEENIIFLNLVAAPEGIRRYLTRFPRVQFITAAIDDGMNDQRYILPGLGDFGDRYFGT 247
BLAST of EWM24887.1 vs. NCBI_GenBank
Match: gi|528247531|gb|EPY33260.1| (uracil phosphoribosyltransferase [Strigomonas culicis]) HSP 1 Score: 213.386 bits (542), Expect = 1.532e-65 Identity = 102/214 (47.66%), Postives = 145/214 (67.76%), Query Frame = 0
Query: 52 IVPHCHSFPYLYTKIRDCKTSNKDFALYASRILRILAEEAVGMVPSSPCSIQTPTNTTYAGMRALDDENSLCVVSILRAGDALMEAVRSVVPQAAVAKILIQRDESSEEKLP--KLFYSKIPSDVNSRFCILCDPMLATGGSALCALSILIQEGQVPPDNIIFVCVVAAPEGIRAVHTRHPEVKIVTGAIDTGLNEDKYIVPGLGDFGDRWYNT 263
++P +L+T IR+ +T DF Y+ RI+R++ E A+ ++P PC+I+TPT Y G+R D + VSILRAG+++ +R + + KIL+QRDE SE+K P + YSK+P DV+SR +L DPM+ATGGSA+ A IL Q+ VP +NIIF+ +VAAPEGIR TR P V+ +T AID G+N+ +YI+PGLGDFGDR++ T
Sbjct: 27 LLPQTPQLHFLFTVIRNVETQRTDFVFYSERIMRLILEAALCLIPVQPCNIKTPTGAVYQGVRP--DAKGIIGVSILRAGESMERVLREMCRGVRIGKILVQRDEKSEDKSPDERYNYSKMPKDVSSRHVLLMDPMIATGGSAIKATEILTQQYAVPEENIIFLNLVAAPEGIRRYLTRFPRVQFITAAIDDGMNDQRYILPGLGDFGDRYFGT 238
BLAST of EWM24887.1 vs. NCBI_GenBank
Match: gi|1090874103|ref|XP_018710073.1| (putative uracil phosphoribosyltransferase [Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993] >gi|1037334742|gb|OBA19545.1| putative uracil phosphoribosyltransferase [Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993]) HSP 1 Score: 211.46 bits (537), Expect = 3.946e-65 Identity = 102/211 (48.34%), Postives = 141/211 (66.82%), Query Frame = 0
Query: 51 VIVPHCHSFPYLYTKIRDCKTSNKDFALYASRILRILAEEAVGMVPSSPCSIQTPTNTTYAGMRALDDENSLCVVSILRAGDALMEAVRSVVPQAAVAKILIQRDESSEEKLPKLFYSKIPSDVNSRFCILCDPMLATGGSALCALSILIQEGQVPPDNIIFVCVVAAPEGIRAVHTRHPEVKIVTGAIDTGLNEDKYIVPGLGDFGDRWY 261
+++P + LY+ IRD T DF Y+ RI+R+L EE + ++P ++Q N TY G R L +C VSI+RAG+++ +R + KILIQRDE E LPKLFY K+P D++ R+ L DPMLATGGSA+ A+ +L+ G V D I+F+ ++AAPEGI+A H ++P+VKI+TG ID L+EDKYIVPGLGDFGDR+Y
Sbjct: 9 ILLPQTNQLIGLYSIIRDKSTKRGDFVFYSDRIIRLLVEEGLNLLPVENATVQCHGNQTYNGARFL---GKICGVSIVRAGESMELGLRDCCRSVKIGKILIQRDE--ETALPKLFYEKLPEDISERYVFLLDPMLATGGSAMMAVEVLLSRG-VKADRILFLNLLAAPEGIQAFHEKYPDVKIITGGIDEKLDEDKYIVPGLGDFGDRYY 213 The following BLAST results are available for this feature:
BLAST of EWM24887.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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