EWM24905.1, cds5773 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24905.1 vs. NCBI_GenBank
Match: gi|585106532|gb|EWM24905.1| (set and mynd domain containing 2 [Nannochloropsis gaditana]) HSP 1 Score: 1593.94 bits (4126), Expect = 0.000e+0 Identity = 773/773 (100.00%), Postives = 773/773 (100.00%), Query Frame = 0
Query: 1 MTDLLPSSFLLAAFVGVSVPDHGTETSSSAGSKARSIVEHVNLSGDLDGPLLLRRHHPDGSSSQAWVPPAVLLPSKPPLSSISSARAPFSASPPGLLTKTDWKGKGRYTIIAPGASVLEGTKILSSPCFTAVIASKVLDKWCTVCLRRLPAKARRLGCKSCNMAYYCSEACLDRDGSLHDLICLFLGRVRAHARRLAANQRLPKQPETSPQPRQSSPQFSFFDTDTLRLAVQVIGSLDHSYHFLRSRKHTSGSIPPDHSREPPEPMSKIMDLSVQEDAEYGTIWKEALELARGLGAPMTEAEREACGGVGRRGENYLEGNAEFFAGLLVRLRVNCHPFRAYKPRNSKLQGSDDRHHEAGGAPALGLFLSLASTVNHSCRPVASFNALIRPQPAESRNSQGESGQRWWYQDVVAELRAVRAMTAGEEVTYSYLEHLHFSRKERQDFLWQAFRFHCQCPRCEEEGGKEGGSEGGTQGWACFTCGGRVEAIREDTGRQRTRGQEGSKQSCGEVARVEGNDWIQCRNQPRACPTRTPESLYLRVEGQGAKLLDRGIRATTISLSSSLSRPFPVQEGNMRGGTGKDDQQKAMRALVKWLAGSGKTVGCKEGKKEEVEGSARFWNDTHPQRHMAAMLLVRMAQTGGRTEENKSTATKEGQPRPGTTVEEDVALAVGTGVLNMYMAAHGLERQPHGATLSMLKVKAMWRLVQRLERGGESVSRAQVWRLAMRHAATREGEKSLDLFRIVHGSDHPLTLEAVRALKSLDAGAFGDICDMPA 773
MTDLLPSSFLLAAFVGVSVPDHGTETSSSAGSKARSIVEHVNLSGDLDGPLLLRRHHPDGSSSQAWVPPAVLLPSKPPLSSISSARAPFSASPPGLLTKTDWKGKGRYTIIAPGASVLEGTKILSSPCFTAVIASKVLDKWCTVCLRRLPAKARRLGCKSCNMAYYCSEACLDRDGSLHDLICLFLGRVRAHARRLAANQRLPKQPETSPQPRQSSPQFSFFDTDTLRLAVQVIGSLDHSYHFLRSRKHTSGSIPPDHSREPPEPMSKIMDLSVQEDAEYGTIWKEALELARGLGAPMTEAEREACGGVGRRGENYLEGNAEFFAGLLVRLRVNCHPFRAYKPRNSKLQGSDDRHHEAGGAPALGLFLSLASTVNHSCRPVASFNALIRPQPAESRNSQGESGQRWWYQDVVAELRAVRAMTAGEEVTYSYLEHLHFSRKERQDFLWQAFRFHCQCPRCEEEGGKEGGSEGGTQGWACFTCGGRVEAIREDTGRQRTRGQEGSKQSCGEVARVEGNDWIQCRNQPRACPTRTPESLYLRVEGQGAKLLDRGIRATTISLSSSLSRPFPVQEGNMRGGTGKDDQQKAMRALVKWLAGSGKTVGCKEGKKEEVEGSARFWNDTHPQRHMAAMLLVRMAQTGGRTEENKSTATKEGQPRPGTTVEEDVALAVGTGVLNMYMAAHGLERQPHGATLSMLKVKAMWRLVQRLERGGESVSRAQVWRLAMRHAATREGEKSLDLFRIVHGSDHPLTLEAVRALKSLDAGAFGDICDMPA
Sbjct: 1 MTDLLPSSFLLAAFVGVSVPDHGTETSSSAGSKARSIVEHVNLSGDLDGPLLLRRHHPDGSSSQAWVPPAVLLPSKPPLSSISSARAPFSASPPGLLTKTDWKGKGRYTIIAPGASVLEGTKILSSPCFTAVIASKVLDKWCTVCLRRLPAKARRLGCKSCNMAYYCSEACLDRDGSLHDLICLFLGRVRAHARRLAANQRLPKQPETSPQPRQSSPQFSFFDTDTLRLAVQVIGSLDHSYHFLRSRKHTSGSIPPDHSREPPEPMSKIMDLSVQEDAEYGTIWKEALELARGLGAPMTEAEREACGGVGRRGENYLEGNAEFFAGLLVRLRVNCHPFRAYKPRNSKLQGSDDRHHEAGGAPALGLFLSLASTVNHSCRPVASFNALIRPQPAESRNSQGESGQRWWYQDVVAELRAVRAMTAGEEVTYSYLEHLHFSRKERQDFLWQAFRFHCQCPRCEEEGGKEGGSEGGTQGWACFTCGGRVEAIREDTGRQRTRGQEGSKQSCGEVARVEGNDWIQCRNQPRACPTRTPESLYLRVEGQGAKLLDRGIRATTISLSSSLSRPFPVQEGNMRGGTGKDDQQKAMRALVKWLAGSGKTVGCKEGKKEEVEGSARFWNDTHPQRHMAAMLLVRMAQTGGRTEENKSTATKEGQPRPGTTVEEDVALAVGTGVLNMYMAAHGLERQPHGATLSMLKVKAMWRLVQRLERGGESVSRAQVWRLAMRHAATREGEKSLDLFRIVHGSDHPLTLEAVRALKSLDAGAFGDICDMPA 773
BLAST of EWM24905.1 vs. NCBI_GenBank
Match: gi|1183328268|gb|ORX58018.1| (SET domain-containing protein [Hesseltinella vesiculosa]) HSP 1 Score: 89.7373 bits (221), Expect = 5.734e-15 Identity = 103/406 (25.37%), Postives = 155/406 (38.18%), Query Frame = 0
Query: 87 APFSASP----PGLLTKTDWKGKGRYTIIAPGASVLEGTKILSSPCFTAVIASKVLDKWCTVCLRRLPAKARRLGCKSCNMAYYCSEACLDRDGSLHDLICLFLGRVRAHARRLAANQRLPKQPETSPQPRQSSPQFSFFDTDTLRLAVQVIGSLDHSYHFLRSRKHTSGSIPPDHSREPPEPMSKIMDLSVQEDAEYGTIWKEALELARGLGAPMTEAEREACGGVGRRGENYLEGNAEFFAGLLVRLRVNCHPFRAYKPRNSKLQGSDDRHHEAGGAPALGLFLSLASTVNHSCRPVASFNALIRPQPAESRNSQGESGQRWWYQDVVAELRAVRAMTAGEEVTYSYLEHLHFSRKERQDFLWQAFRFHCQCPRCEEEGGKEGGSEGGTQGWACFTCGGRVEAI 488
APF + P L T K GR+ + A GT + V+ S LD+ C VCL LPAK + C+ C M +YCS+AC+++D + H +C L AHA QS Q + D D LRL + ++ S D + D S+ P + +M S +E AE + R + T A R + + + + E L R+ N H + RN+ + ALGLF A NH C P +F L ++GQ + R +R + EE+ SY++ L+ R +R+ L + F C+C RC + +G + QG C C V +
Sbjct: 44 APFYSDTMQRFPVQLKNT--KANGRHAVAAEALDA--GTTVCLEKATAFVVRSPYLDQQCHVCLGDLPAK---MACQDCRMVFYCSQACIEKDEATHLKVCSLL----AHA--------------------QSIGQSTDVDPDLLRLIIMLVASRDDN----------------DISKTPYWCVDDLM--SHREKAEPSFV--------RVIS---TAANR----LIAQDPDLMHDLTVEDIVSLACRINSNAHGLGDNQSRNTDV--------------ALGLFPLGAMFFNHGCNPNTAFVGL-------------DNGQLAF--------RTIRPVAKDEELVVSYID-LYDGRDDRRQILLTSKHFWCKCKRC--QSNMQGSVDRFLQGVVCKACQQDVYVV 347
BLAST of EWM24905.1 vs. NCBI_GenBank
Match: gi|758355564|dbj|GAN02388.1| (SET domain-containing protein [Mucor ambiguus]) HSP 1 Score: 83.1889 bits (204), Expect = 5.925e-13 Identity = 98/410 (23.90%), Postives = 143/410 (34.88%), Query Frame = 0
Query: 79 LSSISSARAPFSASPPGLLTKTDWKGKGRYTIIAPGASVLEGTKILSSPCFTAVIASKVLDKWCTVCLRRLPAKARRLGCKSCNMAYYCSEACLDRDGSLHDLICLFLGRVRAHARRLAANQRLPKQPETSPQPRQSSPQFSFFDTDTLRLAVQVIGSLDHSYHFLRSRKHTSGSIPPDHSREPPEPMSKIMDLSVQEDAEYGTIWKEALELARGLGAPMTEAEREACGGVGRRGENYLEGNAEFFAGLLVRLRVNCHPFRAYKPRNSKLQGSDDRHHEAGGAPALGLFLSLASTVNHSCRPVASFNALIRPQPAESRNSQGESGQRWWYQDVVAELRAVRAMTAGEEVTYSYLEHLHFSRKERQDFLWQAFRFHCQCPRCEEEGGKEGGSEGGTQGWACFTCGGRVEAI 488
++ +SS AS P L T K KGR+ + G EGT + V+ S+ +D+ C VCL L K + C C +YCS+ CL++D LH LIC + + A R + D D LRL ++ R T + + P P + DL D K E ++ L M++ ++ + L R+ N H RN+ + ALGLF A NH C P +F + Q A R +R + EE+ SY++ L+ R ER+ L Q+ F C+C RC E + QG C C V I
Sbjct: 41 VTPLSSFYQKALASYPVKLNNT--KVKGRHAVAEIGLE--EGTTLCQEQATAFVVRSEYIDQQCHVCLSDLKQK---MMCSDCKKTFYCSQDCLEKDNDLHVLICAPIAQTEAIGRA------------------------TDVDADLLRLMTLLMA---------RRYLDTQNQDSTEDATIQPTPYWCVEDLISHRDNAEPAFIKVLTEASQRLVMEMSDQ---------------IQMPVDDMVTLACRINSNAHGLGDNHSRNTDV--------------ALGLFPLGALFFNHGCNPNTAFVGVSNGQLA---------------------FRTIRPVNKDEELVVSYID-LYSDRDERRLELLQSKHFWCKCKRC--ASPMEKSVDRFLQGVVCTKCKEDVYII 357
BLAST of EWM24905.1 vs. NCBI_GenBank
Match: gi|1043304218|gb|OBZ88940.1| (N-lysine methyltransferase SMYD2 [Choanephora cucurbitarum]) HSP 1 Score: 79.337 bits (194), Expect = 1.230e-11 Identity = 108/450 (24.00%), Postives = 153/450 (34.00%), Query Frame = 0
Query: 77 PPLSSISSARAPFSASPPGLLTKTDWKGKGRYTIIAPGASVLEGTKILSSPCFTAVIASKVLDKWCTVCLRRLPAKARRLGCKSCNMAYYCSEACLDRDGSLHDLICLFLGRVRAHARRLAANQRLPKQPETSPQPRQSSPQFSFFDTDTLRLAVQVIGSLDHSYHFLRSRKHTSGSIPPDHSREP-PEPMSKIMDLSVQEDAEYGTIWKEALELARGLGAPMTEAEREACGGVGRRGENYLEGNAEFFAGLLVRLRVNCHPFRAYKPRNSKLQGSDDRHHEAGGAPALGLFLSLASTVNHSCRPVASFNALIRPQPAESRNSQGESGQRWWYQDVVAELRAVRAMTAGEEVTYSYLEHLHFSRKERQDFLWQAFRFHCQCPRCEEEGGKEGGSEGGTQGWACFTCGGRVEAIREDTGRQRTRGQ-----EGSKQSCGEVARVEGNDWIQ 520
PP S ++S AS P L T K KGR+ A ++ G + ++ S+ LDK C VCL L K + C C A+YCS+ CL++D +H L C L + A + K + P D LRL L +R+ S +++ P P + DL + K E + L M E + + E L R+ N H RN+ + ALGLF A NH C P +F L Q A R +R + EE+ SY++ L R ER+ L + F C+C RC K + QG C C V I T+G E SC + + D +Q
Sbjct: 39 PPPSPLNSFYEQALASYPVKLNNT--KAKGRHA--AAAENIEAGVTLCQEQATAFIVRSEFLDKQCHVCLADLQQK---MMCSDCQKAFYCSKECLEKDNDVHVLACSSLKQAEA----------IGKATDVDP--------------DLLRLMA-----------LLMTRRFLDASHKEENNLHVGPTPYWCVEDLISHRENANTAFTKVLTEASTRLLMEMPEK---------------IHMSVEDMVTLACRINSNAHGLGDNHSRNTDV--------------ALGLFPLGALFFNHGCNPNTAFVGLPNGQLA---------------------FRTIRPVNKDEELVVSYID-LCSDRDERRQDLLNSKHFWCKCKRCSSSMDK--SVDRFLQGIICKECQRDVYVIPPTPVEHLTKGNRNLYLEKGTFSCAQCSHEVSADKLQ 393
BLAST of EWM24905.1 vs. NCBI_GenBank
Match: gi|729697127|emb|CEJ05325.1| (hypothetical protein RMCBS344292_19268 [Rhizopus microsporus] >gi|729714011|emb|CEI89687.1| hypothetical protein RMCBS344292_04036 [Rhizopus microsporus]) HSP 1 Score: 65.0846 bits (157), Expect = 3.259e-7 Identity = 34/93 (36.56%), Postives = 52/93 (55.91%), Query Frame = 0
Query: 101 DWKGKGRYTIIAPGASVLEGTKILSSPCFTAVIASKVLDKWCTVCLRRLPAKARRLGCKSCNMAYYCSEACLDRDGSLHDLICLFLGRVRAHA 193
+ K KGR+ + A + EG + V+ S +D+ C CL LP+ R C C ++YYCS+ CLD+D +LH+LIC G+++A A
Sbjct: 58 NTKAKGRHAVAAK--ELPEGVTVSLETATAFVVRSDFIDQNCHTCLADLPSDKVR--CTHCPLSYYCSKTCLDKDRALHELICSTFGQLKAIA 146 The following BLAST results are available for this feature:
BLAST of EWM24905.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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