EWM24892.1, cds5769 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24892.1 vs. NCBI_GenBank
Match: gi|585106519|gb|EWM24892.1| (Organic solute transporter Ost-alpha [Nannochloropsis gaditana]) HSP 1 Score: 822.002 bits (2122), Expect = 0.000e+0 Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 0
Query: 1 MEWTTQWLRTGCNGMIRPLGMSPRGRAENNVTFSSSQISSSLSSTHDTKRYYVLLGLALAGLCLTLLLALPHMAWLRVRPPSKIRKFYFAASLLPVVFAVSASITCLAPWTNEYWGLLQHLTEAWALHSLNQLIVERLGGKTSALAKLQARGRQQWLRAPPLCCWCYFLPSTSFTEHTLRSVLTLTRQFIYAAPLLSLLNILLSFTRVPTTPPPLLWHVLRLLLLLSSLLALWGLFILYKASHDDLSRHHQITLKFLSIKLLIIVGIVQEYLFAELMDDREGGREGGKESLAVLVPNALLASESPFLTLLILWAFPLRELDPSFGGEARRSLSSLSPGGGRGDGEGGDKPGVIGGKDQPHAATPLMGPRAGGEGGWGAMLPEEEEIGVGELLFASQDSDLGAITGSPGGLRV 412
MEWTTQWLRTGCNGMIRPLGMSPRGRAENNVTFSSSQISSSLSSTHDTKRYYVLLGLALAGLCLTLLLALPHMAWLRVRPPSKIRKFYFAASLLPVVFAVSASITCLAPWTNEYWGLLQHLTEAWALHSLNQLIVERLGGKTSALAKLQARGRQQWLRAPPLCCWCYFLPSTSFTEHTLRSVLTLTRQFIYAAPLLSLLNILLSFTRVPTTPPPLLWHVLRLLLLLSSLLALWGLFILYKASHDDLSRHHQITLKFLSIKLLIIVGIVQEYLFAELMDDREGGREGGKESLAVLVPNALLASESPFLTLLILWAFPLRELDPSFGGEARRSLSSLSPGGGRGDGEGGDKPGVIGGKDQPHAATPLMGPRAGGEGGWGAMLPEEEEIGVGELLFASQDSDLGAITGSPGGLRV
Sbjct: 1 MEWTTQWLRTGCNGMIRPLGMSPRGRAENNVTFSSSQISSSLSSTHDTKRYYVLLGLALAGLCLTLLLALPHMAWLRVRPPSKIRKFYFAASLLPVVFAVSASITCLAPWTNEYWGLLQHLTEAWALHSLNQLIVERLGGKTSALAKLQARGRQQWLRAPPLCCWCYFLPSTSFTEHTLRSVLTLTRQFIYAAPLLSLLNILLSFTRVPTTPPPLLWHVLRLLLLLSSLLALWGLFILYKASHDDLSRHHQITLKFLSIKLLIIVGIVQEYLFAELMDDREGGREGGKESLAVLVPNALLASESPFLTLLILWAFPLRELDPSFGGEARRSLSSLSPGGGRGDGEGGDKPGVIGGKDQPHAATPLMGPRAGGEGGWGAMLPEEEEIGVGELLFASQDSDLGAITGSPGGLRV 412
BLAST of EWM24892.1 vs. NCBI_GenBank
Match: gi|1129212753|gb|OLQ13789.1| (hypothetical protein AK812_SmicGene2150 [Symbiodinium microadriaticum]) HSP 1 Score: 92.8189 bits (229), Expect = 2.250e-17 Identity = 100/292 (34.25%), Postives = 137/292 (46.92%), Query Frame = 0
Query: 47 DTKRYYVLLGLALAGLCL--TLLLALPHMAWLRVRPPSKIRKFYFAASLLPVVFAVSASITCLAPWTNEYWGLLQHLTEAWALHSLNQLIVERLGGKTSALAKLQAR------GRQQWLRAPPLCCWCYFLP------STSFTEHTLRSVLTLTRQFIYAAPLLSLLNILLSF-TRVPTTPPPLLWHVLRLLLLLSSL---LALWGLFILYKASHDDLSRHHQITLKFLSIKLLIIVGIVQEYLFAELMDDREGGREGGKESLAVLVPNALLASESPFLTLLILWAFPLREL 320
D RY LLGLA+A + L T +L L H L + P S RK+Y L P V A S P L+Q + EA ALH I++ +GG + + L R GR +W PP CC LP +T F L+ + + Q+ Y AP+ + + LL F T L+ V L+ LL S+ L LF LY+A+HD L R + T KFLSIKLLI++ ++Q+ L M R G G V A++A+ L+ AFPL+EL
Sbjct: 32 DHARY--LLGLAVASILLAGTTVLCLSHQRELMLAPVSPRRKYYILMHLFPFVVAASCWFQVAVPELAVGTLLVQEIWEALALHYFGLTIIDLMGGPETTVRILAQREPQGMFGRSRWC-VPPCCCAVALLPCAFRDGTTVFNGAALQKMRAMIEQYCYVAPIAASVTTLLDFNTHQRQVHFEGLFQVELLMQLLQSISMFCCLQALFTLYRATHDVLHR-FKTTSKFLSIKLLILLSLIQKTLVVSRMQPRNPGIVG--------VFGAMVATMVDLSEALVNSAFPLKEL 311
BLAST of EWM24892.1 vs. NCBI_GenBank
Match: gi|752340070|gb|KIN99176.1| (hypothetical protein M404DRAFT_966103 [Pisolithus tinctorius Marx 270]) HSP 1 Score: 72.4034 bits (176), Expect = 3.386e-10 Identity = 73/310 (23.55%), Postives = 144/310 (46.45%), Query Frame = 0
Query: 21 MSPRGRAENNVTFSSSQISSSLSSTHDTKRYYVLLGLALAGLCLTLLLALPHMAWLR----VRPPSKIRKFYFAASLLPVVFAVSASITCLAPWTNEYWGLLQHLTEAWALHSLNQLIVERLGGKTSALAKLQARGRQQWLRAP-PLCCWCYFLPSTSFTEHTLR-SVLTLTRQFIYAAPLLSLLNILL-SFTRVPTTPPPLLWHV---LRLLLLLSSLLALWGLFILYKASHDDLSRHHQITLKFLSIKLLIIVGIVQEYLFAELMDDREGGREGGKESLAVLVPNAL-LASESPFLTLLILWAFPLRE 319
M+P + N + S SS ++ D R +G A+AG C + L + ++ L+ P++ R+ +P+V+A+ + + + Y+ L++ W+ + L L++E + S L+A R+ P P CCW F P+ + +T++ SVL Q++ P S+ I+ +F + + +++ L ++ +S +AL+GL + Y + D+L+ ++ KFL+IKL+++ Q ++ + L E E+ NAL + E F + ++WA+ E
Sbjct: 1 MAPTCPSSNTQSVDQSSFWSSGNTNWDAHR----IGWAVAGGCAAVTLIISCVSILQHCRNYNKPNEQRQV-LRVLYMPLVYAIISFFSYRYFRSYTYYSLVESGLLQWSFNGLQLLLIEYVADTASGRDALKAMERKDKRPLPFPFCCW-RFRPTKPYFMYTVKWSVL----QYVIIRPACSIAGIICEAFNVLCESAGYSIYYANVYLEVIDFISISVALYGLILFYALTKDELAGRRPLS-KFLAIKLIVMFTFYQSFVISWLEGSVIKATEYWTETNIADGLNALAICIEMVFFSAFMMWAYTANE 299
BLAST of EWM24892.1 vs. NCBI_GenBank
Match: gi|595783544|ref|XP_007270315.1| (DUF300-domain-containing protein [Fomitiporia mediterranea MF3/22] >gi|393214024|gb|EJC99518.1| DUF300-domain-containing protein [Fomitiporia mediterranea MF3/22]) HSP 1 Score: 71.2478 bits (173), Expect = 9.513e-10 Identity = 68/284 (23.94%), Postives = 126/284 (44.37%), Query Frame = 0
Query: 55 LGLALAGLCLTLLLALPHMAWLRVRPPSKIRKFYFAAS--------LLPVVFAVSASITCLAPWTNEYWGLLQHLTEAWALHSLNQLIVERLGGKTSALAKLQARGRQQWLRAP-PLCCWCYFLPSTSFTEHTLRSVLTLTRQFIYAAPLLSLLNILLSFTRVPT-----TPPPLLWHVLRLLLLLSSLLALWGLFILYKASHDDLSRHHQITLKFLSIKLLIIVGIVQEYLFAEL----MDD----REGGREGGKESLAVLVPNALLASESPFLTLLILWAFP 316
+G A++G C L + + + L S R + A +P V+A+ + + + Y+ L++ + EA L + LI+E + S + A R+ + P PLCCW Y P+ ++ +T++ L Q++ PL+S+ I+ + T + + ++ +S LAL+GLF+ Y + D+L + KFL IKL+++ Q ++F L + D E G +LA+ + E F L ++W++P
Sbjct: 31 IGWAISGGCAVLTVIISIFSVL-----SHCRNYTVPAEQRQIIRILYMPPVYAIISFFSYRYFRSYTYYELIEVVYEAVTLSAFMLLIIEYVASTASDHSARNALERKDKRKLPIPLCCWRY-RPTKAYFLYTMK---WLVMQYVVVRPLVSIAAIICQAFNILCENEGLTHFEFAYPYIAIVDFISISLALYGLFVFYGLTKDELEGQRPLA-KFLCIKLIVMFTFYQTFVFDALEGRVIHDTPYWTETNIADGLNALAICI-------EMVFFALAMMWSYP 297
BLAST of EWM24892.1 vs. NCBI_GenBank
Match: gi|630357889|ref|XP_007868245.1| (DUF300-domain-containing protein [Gloeophyllum trabeum ATCC 11539] >gi|521722544|gb|EPQ52905.1| DUF300-domain-containing protein [Gloeophyllum trabeum ATCC 11539]) HSP 1 Score: 68.5514 bits (166), Expect = 5.033e-9 Identity = 80/323 (24.77%), Postives = 142/323 (43.96%), Query Frame = 0
Query: 23 PRGRAENNVTFSSSQISSSLSSTHDTKRYYVLLGLALAGLC------LTLLLALPHMAWLRVRPPSK--IRKFYFAASLLPVVFAVSASITCLAPWTNEYWGLLQHLTEAWALHSLNQLIVERLGGKTSALAKLQARGRQQWLRAP-PLCCWCYFLPSTSFTEHTLR-SVLTLTRQFIYAAPLLSLLNILLSFTRV--PTTPPPLLWH--VLRLLLLLSSLLALWGLFILYKASHDDLSRHHQITLKFLSIKLLIIVGIVQEYLFAELMDDREGGREGGKESLAVLVPNAL----LASESPFLTLLILWAFPLRELDPSFGGE 327
P A+N S S + DT R +G A+AG C L+ + L H + R + +R Y +P V+A+ + ++ Y+ L++ EA L + L++E + + A A R+ P P C W Y P+ ++ +T++ SVL Q++ P +S+ I+ + V P+ P + + L + +S +AL+GLFI Y +H +L + KFL+IKL+++ Q ++F+ L + G + + + N L + E F ++WA+ +E GGE
Sbjct: 4 PTCPADNAQAVDQSSFWSGDNIHWDTHR----IGWAIAGGCAAATVILSAVTVLQHCRNYQNRAEQRQILRILY-----MPPVYAIISFLSYRFFRDYTYYSLIEVAYEAVTLSAFMMLLIEYVATTAAGHAAENAIARKDKTPLPFPFCFWRY-RPTKAYFMYTIKWSVL----QYVVVRPGVSIAGIVCEYYGVLCPSGPYSIYYAEVYLEAIDFVSITVALYGLFIFYGLTHAELQGRRPLA-KFLAIKLIVMFTFYQSFVFSAL--ESHGIIKATDYWTSTNIANGLNALAICIEMVFFAAFMMWAYTWKEYTLK-GGE 308
BLAST of EWM24892.1 vs. NCBI_GenBank
Match: gi|751714098|gb|KIM63118.1| (hypothetical protein SCLCIDRAFT_768064 [Scleroderma citrinum Foug A]) HSP 1 Score: 67.781 bits (164), Expect = 9.323e-9 Identity = 71/281 (25.27%), Postives = 131/281 (46.62%), Query Frame = 0
Query: 55 LGLALAGLCLTLLLALPHMA-WLRVRPPSKIR--KFYFAASLLPVVFAVSASITCLAPWTNEYWGLLQHLTEAWALHSLNQLIVERLGGKTSALAKLQARGRQQWLRAP-PLCCWCYFLPSTSFTEHTLR-SVLTLTRQFIYAAPLLSLLNILLSFTRVPTTPPPLLWHV------LRLLLLLSSLLALWGLFILYKASHDDLSRHHQITLKFLSIKLLIIVGIVQEYLFAELMDDREGGREGGKES-LAVLVPNALLA----SESPFLTLLILWAFPLRE 319
+G A+AG C L L + ++ + R +K R + +P V+A+ + ++ + Y+ L++ EA L + L++E + + L+A R+ R P P CCW Y P+ ++ +T++ SVL Q++ P S+ I+ V W++ L ++ +S +AL+GL + Y + D+L ++ KFL+IKL+++ Q +LF+ L EG E A + + L A E F + ++WA+ + E
Sbjct: 30 IGWAVAGGCAALTLIISSISVYQHCRNYNKPREQRQILRVLYMPPVYAIISFLSYRYFRSYTYYSLVESAYEAITLSAFLLLLIEYVATTATGHDALKAMERKDKRRLPIPFCCWRY-RPTKAYFMYTVKWSVL----QYVIIRPACSIAGIICEALNVLCESAG--WNINYANVYLEVIDFISISVALYGLILFYGLTKDELVGRRPLS-KFLAIKLIVMFTFYQSFLFSAL----EGSVIKATEYWTATNIADGLTALATCIEMVFFSAFMMWAYTVNE 298
BLAST of EWM24892.1 vs. NCBI_GenBank
Match: gi|1012958715|gb|KYQ33502.1| (Transmembrane protein 184 [Hypsizygus marmoreus]) HSP 1 Score: 67.0106 bits (162), Expect = 1.937e-8 Identity = 75/306 (24.51%), Postives = 127/306 (41.50%), Query Frame = 0
Query: 28 ENNVTFSSSQISSSLSSTHDTKRYYVLLGLALAGLCLTLLLALPHMAWLR----VRPPSKIRKFYFAASLLPVVFAVSASITCLAPWTNEYWGLLQHLTEAWALHSLNQLIVERLGGKTSALAKLQARGRQQWLRAP-PLCCWCYFLPSTSFTEHTLR-SVLTLTRQFIYAAPLLSLLNILLSFTRVPTTPPPLLWHV----LRLLLLLSSLLALWGLFILYKASHDDLSRHHQITLKFLSIKLLIIVGIVQEYLFAELMDD--------REGGREGGKESLAVLVPNALLASESPFLTLLILWAF 315
EN V S S D R +G A+AG C L L + + LR PS+ R+ +P V+A+ + + Y+ ++ EA L + L++E + S A R+ P P CCW Y P+ ++ +T++ SVL Q++ PL+S++ I+ V H L + +S +AL+GL + Y + ++L+ + KFL IKL+++ Q ++F L E G +LA+ + E F L++WA+
Sbjct: 9 ENKVDIDQSSFWDSNGVNWDHHR----IGWAIAGGCACLTLIISLITVLRHCRSYTNPSEQRQI-LRILYMPPVYAIISFFSYRYFRHYTYYSFIEVAYEAVTLSAFLLLLIEYVAATASGRNAEDAIARKDKRPLPIPFCCWRY-RPTKAYFVYTVKWSVL----QYVIIRPLVSIIGIICEKYGVLCESAGFSVHYASVYLECIDFISISVALYGLLVFYGLTAEELAGRRPLA-KFLCIKLIVMFTFYQSFIFGALEGHVIHETPYWTEANISNGLNALAICI-------EMVFFAALMMWAY 296
BLAST of EWM24892.1 vs. NCBI_GenBank
Match: gi|1024110308|gb|KZW01476.1| (DUF300-domain-containing protein [Exidia glandulosa HHB12029]) HSP 1 Score: 66.2402 bits (160), Expect = 3.760e-8 Identity = 77/313 (24.60%), Postives = 127/313 (40.58%), Query Frame = 0
Query: 29 NNVTFSSSQISSSLSSTHDTKRYYVLLGLALAGLC------LTLLLALPHMAWLRVRPPSK--IRKFYFAASLLPVVFAVSASITCLAPWTNEYWGLLQHLTEAWALHSLNQLIVERLGGKTSALAKLQARGRQQWLRAP-PLCCWCYFLPSTSFTEHTLR-SVLTLTRQFIYAAPLLSLLNIL---LSFTRVPTTPPPLLWHVLRLLLLLSSLLALWGLFILYKASHDDLSRHHQITLKFLSIKLLIIVGIVQEYLFAELMDDR---------EGGREGGKESLAVLVPNALLASESPFLTLLILWAFPLRE 319
N SQ + S D R +G A++G C +TL L H VR + IR Y +P VFA+ + + Y+ L Q + EA+ + + LI+ + S A R+ P P CCW Y P+ ++ +T++ SV+ Q++ PL S+ I+ V + P L + + +AL+GL++ Y + ++L KFL IKL++ Q ++F+ L + G +LA + E F LL+ WA+P +E
Sbjct: 10 NKGNIDQSQFWVNGSFNWDAHR----IGWAVSGGCAALTVIITLFTVLGHARNYHVRDQQRQIIRILY-----MPPVFAIISFFSYRFFRAYTYYELAQVIYEAFTISAFTLLIIAYVAETASDNTAEAALQRKDKKPLPFPFCCWRY-RPTKAYFMYTVKWSVM----QYVIIRPLASIAGIICEAFDILCVESYSPHFAEVYLAAIDFVCISIALYGLWVFYSLTKEELDGRRPFA-KFLCIKLIVFFTFYQSFVFSVLQNYNIIHETEFWTATNVADGLNALATTI-------EMVFFALLMAWAYPNKE 300
BLAST of EWM24892.1 vs. NCBI_GenBank
Match: gi|1129211815|gb|OLQ13006.1| (hypothetical protein AK812_SmicGene2989 [Symbiodinium microadriaticum]) HSP 1 Score: 66.2402 bits (160), Expect = 5.418e-8 Identity = 65/277 (23.47%), Postives = 112/277 (40.43%), Query Frame = 0
Query: 24 RGRAENNVTFSSSQISSSLSSTHDTKRYYVLLGLALAGLCLTLLLALPHMAWLRVRPPSKIRKFYFAASLLPVVFAVSASITCLAPWTNEYWGLLQHLTEAWALHSLNQLI--------------------------VERLGGKTSALAKLQARGRQQWLRAPPL-CCWCYFLPSTSFTEHTLRSVLTLTRQFIYAAPLLSLLNILLSFTRVPTTPPPLLWHVLRLLLLLSSLLALWGLFILYKASHDDLSRHHQITLKFLSIKLLIIVGIVQEYLF 273
R EN TF ++ I SL+ L +T+++ L H L RP +R Y P V+A +T P + L EA+A++S ++ ++ + S + LQ G Q++ PP CC+ + T L V L RQ++ + +N + R P + V LL +S ++A++GLF++Y A+H+ L R + T KF+S+K ++ + I+Q+
Sbjct: 967 RCMEENPTTFLTATIIGSLA------------------LVVTMIVCLRHSRALDARPFCLLRSSYHGMLAFPTVWACCCWLTLFTPLSTPIAELFMGQGEAFAIYSFMVILFMLVSVEAMKQGEGVEIDEPSSPSSRTSQVSLRQSIIQTLQKFGPQKYFTVPPFGCCFRPCVKPHHITAKQLLWVSRLVRQYVV---MQVFVNAYFMWARFTLDPYWEVDAVADPLLKVSGMVAMYGLFVMYAATHELLHRWN-TTRKFISVKAMVALSILQQKFL 1221
BLAST of EWM24892.1 vs. NCBI_GenBank
Match: gi|449545116|gb|EMD36088.1| (hypothetical protein CERSUDRAFT_115994 [Gelatoporia subvermispora B]) HSP 1 Score: 64.3142 bits (155), Expect = 1.100e-7 Identity = 82/340 (24.12%), Postives = 146/340 (42.94%), Query Frame = 0
Query: 55 LGLALAGLC------LTLLLALPHMAWLRVRPPSK--IRKFYFAASLLPVVFAVSASITCLAPWTNEYWGLLQHLTEAWALHSLNQLIVERLGGKTSALAKLQARGRQQWLRAP-PLCCWCYFLPSTSFTEHTLR-SVLTLTRQFIYAAPLLSLLNILLSFTRVPTTPPPLLWHV----LRLLLLLSSLLALWGLFILYKASHDDLSRHHQITLKFLSIKLLIIVGIVQEYLFAELMDDREGGREGGKESLAVLVPNAL-LASESPFLTLLILWAFPLRELDPSFGGEARRS-----LSSLSPGGGRGDGEGGDKPGVIGGKDQPHAATPLMGPRAGGEG 374
+G +AG C LT++ H R + +R Y +P V+AV + + + Y+ L++ E+ L + L++E + + A R+ + P P CCW Y P+ ++ +TL+ SVL Q++ P+LS++ I+ V P + + ++ S +AL+GL I Y + D+L ++ KFLSIKL++++ Q +F L + E+ NAL + E F + ++WA+ E G+ + S L S++ + G K V +P+A P + AG +G
Sbjct: 33 IGWVIAGACAAATVILTIINVTQHCLHYTNRAEQRQILRVLY-----MPAVYAVISFFSYRYFRSYTYYDLIECAYESVTLSAFLLLLIEFVAATAAGHNVDNAIARKDKHKMPIPFCCWRY-RPTKAYFMYTLKWSVL----QYVIVRPVLSIVGIICQHYGVLCESGPWSFKTANAYIEVIDAASITIALYGLIIFYSLTKDELKGRRPLS-KFLSIKLIVMLTFYQSLVFDALEGRVIHATQYWTETNIADGLNALAVCIEMVFFSAFMMWAYSPSEY--KIPGQPKTSIGRPLLDSINYSDFAVEIAGSVKFFVDYFTGKPYAHGPRV-KEAGADG 358 The following BLAST results are available for this feature:
BLAST of EWM24892.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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